Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 RNU6-113P-201ENST00000516653 101 ntBASIC1.09□□□□□ -2.23
CLDN1O95832 AP003484.1-201ENST00000530974 250 ntBASIC1.09□□□□□ -2.23
CLDN1O95832 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.09□□□□□ -2.23
CLDN1O95832 CYP3A52P-201ENST00000563326 91 ntBASIC1.09□□□□□ -2.23
CLDN1O95832 MIR5197-201ENST00000583721 112 ntBASIC1.09□□□□□ -2.23
CLDN1O95832 MIR376A2-201ENST00000636782 80 ntBASIC1.09□□□□□ -2.23
CLDN1O95832 Y_RNA.370-201ENST00000365589 108 ntBASIC1.08□□□□□ -2.24
CLDN1O95832 MIR520C-201ENST00000385005 87 ntBASIC1.08□□□□□ -2.24
CLDN1O95832 SNORA40.5-201ENST00000391061 128 ntBASIC1.08□□□□□ -2.24
CLDN1O95832 AC006461.1-201ENST00000412637 326 ntBASIC1.08□□□□□ -2.24
CLDN1O95832 AC074198.2-201ENST00000508153 258 ntBASIC1.08□□□□□ -2.24
CLDN1O95832 SNORA18.4-201ENST00000516440 124 ntBASIC1.08□□□□□ -2.24
CLDN1O95832 SNORD36C-201ENST00000516733 66 ntBASIC1.08□□□□□ -2.24
CLDN1O95832 RN7SKP88-201ENST00000516847 250 ntBASIC1.08□□□□□ -2.24
CLDN1O95832 7SK.8-201ENST00000612110 250 ntBASIC1.08□□□□□ -2.24
CLDN1O95832 7SK.11-201ENST00000615477 250 ntBASIC1.08□□□□□ -2.24
CLDN1O95832 7SK.13-201ENST00000622040 250 ntBASIC1.08□□□□□ -2.24
CLDN1O95832 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.07□□□□□ -2.24
CLDN1O95832 Y_RNA.337-201ENST00000365312 102 ntBASIC1.07□□□□□ -2.24
CLDN1O95832 Y_RNA.440-201ENST00000384120 114 ntBASIC1.07□□□□□ -2.24
CLDN1O95832 Y_RNA.494-201ENST00000384432 111 ntBASIC1.07□□□□□ -2.24
CLDN1O95832 MIR548I3-201ENST00000408378 149 ntBASIC1.07□□□□□ -2.24
CLDN1O95832 MIR548I1-201ENST00000408810 149 ntBASIC1.07□□□□□ -2.24
CLDN1O95832 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.07□□□□□ -2.24
CLDN1O95832 RPL39P39-201ENST00000455840 151 ntBASIC1.07□□□□□ -2.24
CLDN1O95832 RPS26P48-201ENST00000491713 339 ntBASIC1.07□□□□□ -2.24
CLDN1O95832 AC090821.2-201ENST00000523552 176 ntBASIC1.07□□□□□ -2.24
CLDN1O95832 AC019288.1-201ENST00000557918 224 ntBASIC1.07□□□□□ -2.24
CLDN1O95832 MIR3129-201ENST00000581095 76 ntBASIC1.07□□□□□ -2.24
CLDN1O95832 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.07□□□□□ -2.24
CLDN1O95832 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.06□□□□□ -2.24
CLDN1O95832 Y_RNA.180-201ENST00000363867 113 ntBASIC1.06□□□□□ -2.24
CLDN1O95832 Y_RNA.241-201ENST00000364470 117 ntBASIC1.06□□□□□ -2.24
CLDN1O95832 Y_RNA.272-201ENST00000364696 102 ntBASIC1.06□□□□□ -2.24
CLDN1O95832 RNU6-1189P-201ENST00000383958 107 ntBASIC1.06□□□□□ -2.24
CLDN1O95832 RNU6-768P-201ENST00000384683 107 ntBASIC1.06□□□□□ -2.24
CLDN1O95832 Y_RNA.580-201ENST00000391004 95 ntBASIC1.06□□□□□ -2.24
CLDN1O95832 RNU6-394P-201ENST00000410735 107 ntBASIC1.06□□□□□ -2.24
CLDN1O95832 RNA5SP127-201ENST00000411051 133 ntBASIC1.06□□□□□ -2.24
CLDN1O95832 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.06□□□□□ -2.24
CLDN1O95832 AC245047.7-201ENST00000440265 293 ntBASIC1.06□□□□□ -2.24
CLDN1O95832 RPS29P29-201ENST00000456396 171 ntBASIC1.06□□□□□ -2.24
CLDN1O95832 AC087343.1-201ENST00000477341 475 ntBASIC1.06□□□□□ -2.24
CLDN1O95832 RPS23P4-201ENST00000487908 423 ntBASIC1.06□□□□□ -2.24
CLDN1O95832 SNORA31.4-201ENST00000516049 129 ntBASIC1.06□□□□□ -2.24
CLDN1O95832 AC068338.1-201ENST00000565567 176 ntBASIC1.06□□□□□ -2.24
CLDN1O95832 MIR3646-201ENST00000578301 84 ntBASIC1.06□□□□□ -2.24
CLDN1O95832 MIR4295-201ENST00000585286 85 ntBASIC1.06□□□□□ -2.24
CLDN1O95832 MIR4791-201ENST00000607666 84 ntBASIC1.06□□□□□ -2.24
CLDN1O95832 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.05□□□□□ -2.24
CLDN1O95832 SNORA25.7-201ENST00000364375 127 ntBASIC1.05□□□□□ -2.24
CLDN1O95832 Y_RNA.357-201ENST00000365487 109 ntBASIC1.05□□□□□ -2.24
CLDN1O95832 SNORA27-201ENST00000384323 126 ntBASIC1.05□□□□□ -2.24
CLDN1O95832 SNORA75.5-201ENST00000391291 81 ntBASIC1.05□□□□□ -2.24
CLDN1O95832 RPS29P24-201ENST00000486345 171 ntBASIC1.05□□□□□ -2.24
CLDN1O95832 AL133373.1-201ENST00000497098 94 ntBASIC1.05□□□□□ -2.24
CLDN1O95832 RN7SKP179-201ENST00000516126 217 ntBASIC1.05□□□□□ -2.24
CLDN1O95832 RNU6-1212P-201ENST00000517023 104 ntBASIC1.05□□□□□ -2.24
CLDN1O95832 Y_RNA.150-201ENST00000363562 102 ntBASIC1.04□□□□□ -2.24
CLDN1O95832 Y_RNA.270-201ENST00000364693 104 ntBASIC1.04□□□□□ -2.24
CLDN1O95832 SNORA70.7-201ENST00000384159 133 ntBASIC1.04□□□□□ -2.24
CLDN1O95832 SNORA51.10-201ENST00000384418 136 ntBASIC1.04□□□□□ -2.24
CLDN1O95832 MIR1302-7-201ENST00000408841 72 ntBASIC1.04□□□□□ -2.24
CLDN1O95832 AL392103.1-201ENST00000447000 198 ntBASIC1.04□□□□□ -2.24
CLDN1O95832 RNU7-73P-201ENST00000458743 63 ntBASIC1.04□□□□□ -2.24
CLDN1O95832 RNU7-96P-201ENST00000459535 64 ntBASIC1.04□□□□□ -2.24
CLDN1O95832 RNU6-998P-201ENST00000515894 101 ntBASIC1.04□□□□□ -2.24
CLDN1O95832 SCARNA15-202ENST00000516881 127 ntBASIC1.04□□□□□ -2.24
CLDN1O95832 DNAJC19P2-201ENST00000593340 302 ntBASIC1.04□□□□□ -2.24
CLDN1O95832 PRELID3BP2-201ENST00000605362 201 ntBASIC1.04□□□□□ -2.24
CLDN1O95832 AC243994.1-201ENST00000618627 109 ntBASIC1.04□□□□□ -2.24
CLDN1O95832 MIR4251-201ENST00000635819 61 ntBASIC1.04□□□□□ -2.24
CLDN1O95832 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
CLDN1O95832 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.04□□□□□ -2.24
CLDN1O95832 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
CLDN1O95832 SNORA25.8-201ENST00000364831 128 ntBASIC1.03□□□□□ -2.24
CLDN1O95832 RNU1-133P-201ENST00000364867 167 ntBASIC1.03□□□□□ -2.24
CLDN1O95832 Y_RNA.464-201ENST00000384282 110 ntBASIC1.03□□□□□ -2.24
CLDN1O95832 RNU6-1067P-201ENST00000384752 107 ntBASIC1.03□□□□□ -2.24
CLDN1O95832 MIR570-201ENST00000384917 97 ntBASIC1.03□□□□□ -2.24
CLDN1O95832 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.03□□□□□ -2.24
CLDN1O95832 AC048334.1-201ENST00000477975 159 ntBASIC1.03□□□□□ -2.24
CLDN1O95832 SNORA31.2-201ENST00000516019 134 ntBASIC1.03□□□□□ -2.24
CLDN1O95832 MTND1P7-201ENST00000632801 297 ntBASIC1.03□□□□□ -2.24
CLDN1O95832 MIR373-201ENST00000362273 69 ntBASIC1.02□□□□□ -2.25
CLDN1O95832 RNA5SP264-201ENST00000363115 107 ntBASIC1.02□□□□□ -2.25
CLDN1O95832 RNU6-1082P-201ENST00000364574 107 ntBASIC1.02□□□□□ -2.25
CLDN1O95832 Y_RNA.363-201ENST00000365529 113 ntBASIC1.02□□□□□ -2.25
CLDN1O95832 Y_RNA.521-201ENST00000384560 114 ntBASIC1.02□□□□□ -2.25
CLDN1O95832 RNU6-939P-201ENST00000384634 107 ntBASIC1.02□□□□□ -2.25
CLDN1O95832 MIR1185-1-201ENST00000408598 86 ntBASIC1.02□□□□□ -2.25
CLDN1O95832 snoU13.16-201ENST00000459350 104 ntBASIC1.02□□□□□ -2.25
CLDN1O95832 AC107297.1-201ENST00000459991 176 ntBASIC1.02□□□□□ -2.25
CLDN1O95832 MIR8065-201ENST00000620577 100 ntBASIC1.02□□□□□ -2.25
CLDN1O95832 MIR3658-201ENST00000636291 56 ntBASIC1.02□□□□□ -2.25
CLDN1O95832 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.01□□□□□ -2.25
CLDN1O95832 HMGN1P33-201ENST00000432945 451 ntBASIC1.01□□□□□ -2.25
CLDN1O95832 RNU6-947P-201ENST00000516264 106 ntBASIC1.01□□□□□ -2.25
CLDN1O95832 RNU11-2P-201ENST00000516898 142 ntBASIC1.01□□□□□ -2.25
CLDN1O95832 MIR3144-201ENST00000579460 79 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 210.4 ms