Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 RNU1-133P-201ENST00000364867 167 ntBASIC0.92□□□□□ -2.26
RTN3O95197 Y_RNA.410-201ENST00000383992 113 ntBASIC0.92□□□□□ -2.26
RTN3O95197 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.92□□□□□ -2.26
RTN3O95197 MIR4643-201ENST00000577473 78 ntBASIC0.92□□□□□ -2.26
RTN3O95197 RNU6-125P-201ENST00000384505 107 ntBASIC0.91□□□□□ -2.26
RTN3O95197 AL035398.1-201ENST00000430869 322 ntBASIC0.91□□□□□ -2.26
RTN3O95197 MTCYBP9-201ENST00000431021 303 ntBASIC0.91□□□□□ -2.26
RTN3O95197 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.91□□□□□ -2.26
RTN3O95197 7SK.10-201ENST00000621414 298 ntBASIC0.91□□□□□ -2.26
RTN3O95197 RNU6-103P-201ENST00000363686 107 ntBASIC0.9□□□□□ -2.27
RTN3O95197 Y_RNA.292-201ENST00000364904 97 ntBASIC0.9□□□□□ -2.27
RTN3O95197 RNU6-580P-201ENST00000365159 107 ntBASIC0.9□□□□□ -2.27
RTN3O95197 RNU6-1189P-201ENST00000383958 107 ntBASIC0.9□□□□□ -2.27
RTN3O95197 SNORA79-201ENST00000408376 140 ntBASIC0.9□□□□□ -2.27
RTN3O95197 MIR1827-201ENST00000408549 66 ntBASIC0.9□□□□□ -2.27
RTN3O95197 MTND2P23-201ENST00000422990 651 ntBASIC0.9□□□□□ -2.27
RTN3O95197 AF228730.3-201ENST00000436691 102 ntBASIC0.9□□□□□ -2.27
RTN3O95197 RNU7-96P-201ENST00000459535 64 ntBASIC0.9□□□□□ -2.27
RTN3O95197 PSMC1P5-201ENST00000512850 177 ntBASIC0.9□□□□□ -2.27
RTN3O95197 CYP3A137P-201ENST00000562436 69 ntBASIC0.9□□□□□ -2.27
RTN3O95197 MIR4719-201ENST00000585233 84 ntBASIC0.9□□□□□ -2.27
RTN3O95197 AL353765.1-201ENST00000605514 183 ntBASIC0.9□□□□□ -2.27
RTN3O95197 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.9□□□□□ -2.27
RTN3O95197 MIR1-1-201ENST00000362147 71 ntBASIC0.89□□□□□ -2.27
RTN3O95197 Y_RNA.133-201ENST00000363428 110 ntBASIC0.89□□□□□ -2.27
RTN3O95197 RNU6-728P-201ENST00000365375 104 ntBASIC0.89□□□□□ -2.27
RTN3O95197 RNU6-1335P-201ENST00000365426 107 ntBASIC0.89□□□□□ -2.27
RTN3O95197 Y_RNA.562-201ENST00000384695 113 ntBASIC0.89□□□□□ -2.27
RTN3O95197 RNU6-205P-201ENST00000390858 107 ntBASIC0.89□□□□□ -2.27
RTN3O95197 AC113410.1-201ENST00000505029 247 ntBASIC0.89□□□□□ -2.27
RTN3O95197 RNU6-1045P-201ENST00000516321 107 ntBASIC0.89□□□□□ -2.27
RTN3O95197 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.89□□□□□ -2.27
RTN3O95197 MIR4698-201ENST00000577795 80 ntBASIC0.89□□□□□ -2.27
RTN3O95197 FAM71BP1-201ENST00000604431 523 ntBASIC0.89□□□□□ -2.27
RTN3O95197 Y_RNA.76-201ENST00000362931 109 ntBASIC0.88□□□□□ -2.27
RTN3O95197 Y_RNA.162-201ENST00000363683 102 ntBASIC0.88□□□□□ -2.27
RTN3O95197 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
RTN3O95197 AC090844.1-201ENST00000422019 156 ntBASIC0.88□□□□□ -2.27
RTN3O95197 SCARNA15.1-201ENST00000516384 125 ntBASIC0.88□□□□□ -2.27
RTN3O95197 AC011921.3-201ENST00000605540 361 ntBASIC0.88□□□□□ -2.27
RTN3O95197 Z97988.1-201ENST00000637697 135 ntBASIC0.88□□□□□ -2.27
RTN3O95197 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
RTN3O95197 SNORD38B-201ENST00000384690 67 ntBASIC0.87□□□□□ -2.27
RTN3O95197 RNU6-913P-201ENST00000390913 95 ntBASIC0.87□□□□□ -2.27
RTN3O95197 RNU6-998P-201ENST00000515894 101 ntBASIC0.87□□□□□ -2.27
RTN3O95197 AC108706.1-201ENST00000611053 297 ntBASIC0.87□□□□□ -2.27
RTN3O95197 SNORD38B-202ENST00000625943 69 ntBASIC0.87□□□□□ -2.27
RTN3O95197 Y_RNA.23-201ENST00000362496 106 ntBASIC0.86□□□□□ -2.27
RTN3O95197 Y_RNA.178-201ENST00000363832 102 ntBASIC0.86□□□□□ -2.27
RTN3O95197 SNORD114-2-201ENST00000363953 78 ntBASIC0.86□□□□□ -2.27
RTN3O95197 Y_RNA.440-201ENST00000384120 114 ntBASIC0.86□□□□□ -2.27
RTN3O95197 Y_RNA.542-201ENST00000384641 111 ntBASIC0.86□□□□□ -2.27
RTN3O95197 MIR193B-201ENST00000384907 83 ntBASIC0.86□□□□□ -2.27
RTN3O95197 MIR605-201ENST00000385078 83 ntBASIC0.86□□□□□ -2.27
RTN3O95197 MIR100-201ENST00000385259 80 ntBASIC0.86□□□□□ -2.27
RTN3O95197 SNORD77.3-201ENST00000391113 65 ntBASIC0.86□□□□□ -2.27
RTN3O95197 SNORD99-201ENST00000408612 74 ntBASIC0.86□□□□□ -2.27
RTN3O95197 RNU4-43P-201ENST00000410628 137 ntBASIC0.86□□□□□ -2.27
RTN3O95197 AC004941.2-201ENST00000427009 228 ntBASIC0.86□□□□□ -2.27
RTN3O95197 MIR8055-201ENST00000610739 97 ntBASIC0.86□□□□□ -2.27
RTN3O95197 SNORA1.1-201ENST00000364671 133 ntBASIC0.85□□□□□ -2.27
RTN3O95197 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
RTN3O95197 MIR548I3-201ENST00000408378 149 ntBASIC0.85□□□□□ -2.27
RTN3O95197 RNU7-62P-201ENST00000458856 62 ntBASIC0.85□□□□□ -2.27
RTN3O95197 RNU2-11P-201ENST00000459191 187 ntBASIC0.85□□□□□ -2.27
RTN3O95197 Y_RNA.668-201ENST00000516233 93 ntBASIC0.85□□□□□ -2.27
RTN3O95197 MIR4744-201ENST00000581563 82 ntBASIC0.85□□□□□ -2.27
RTN3O95197 MIR4653-201ENST00000585107 83 ntBASIC0.85□□□□□ -2.27
RTN3O95197 AC104465.1-201ENST00000611365 139 ntBASIC0.85□□□□□ -2.27
RTN3O95197 SNORD27-201ENST00000363981 72 ntBASIC0.84□□□□□ -2.27
RTN3O95197 SNORA1-201ENST00000384107 130 ntBASIC0.84□□□□□ -2.27
RTN3O95197 MIR568-201ENST00000385036 95 ntBASIC0.84□□□□□ -2.27
RTN3O95197 SNORD105-201ENST00000386910 85 ntBASIC0.84□□□□□ -2.27
RTN3O95197 AC244023.1-201ENST00000426884 112 ntBASIC0.84□□□□□ -2.27
RTN3O95197 AL138752.1-201ENST00000452964 351 ntBASIC0.84□□□□□ -2.27
RTN3O95197 RNU6-351P-201ENST00000516097 100 ntBASIC0.84□□□□□ -2.27
RTN3O95197 RNU6-561P-201ENST00000516222 102 ntBASIC0.84□□□□□ -2.27
RTN3O95197 AC242498.1-201ENST00000604134 111 ntBASIC0.84□□□□□ -2.27
RTN3O95197 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
RTN3O95197 Y_RNA.7-201ENST00000362352 102 ntBASIC0.83□□□□□ -2.28
RTN3O95197 RNU6-934P-201ENST00000365154 107 ntBASIC0.83□□□□□ -2.28
RTN3O95197 RNY4P28-201ENST00000365281 93 ntBASIC0.83□□□□□ -2.28
RTN3O95197 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
RTN3O95197 Y_RNA.478-201ENST00000384358 107 ntBASIC0.83□□□□□ -2.28
RTN3O95197 RNU6-110P-201ENST00000384508 104 ntBASIC0.83□□□□□ -2.28
RTN3O95197 AC006461.1-201ENST00000412637 326 ntBASIC0.83□□□□□ -2.28
RTN3O95197 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.83□□□□□ -2.28
RTN3O95197 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.83□□□□□ -2.28
RTN3O95197 MIR1273G-201ENST00000577677 100 ntBASIC0.83□□□□□ -2.28
RTN3O95197 AC013244.2-201ENST00000603396 103 ntBASIC0.83□□□□□ -2.28
RTN3O95197 Y_RNA.20-201ENST00000362479 113 ntBASIC0.82□□□□□ -2.28
RTN3O95197 Y_RNA.350-201ENST00000365409 98 ntBASIC0.82□□□□□ -2.28
RTN3O95197 RPS26P5-201ENST00000418544 335 ntBASIC0.82□□□□□ -2.28
RTN3O95197 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.82□□□□□ -2.28
RTN3O95197 HMGN1P33-201ENST00000432945 451 ntBASIC0.82□□□□□ -2.28
RTN3O95197 AL121914.1-201ENST00000450188 156 ntBASIC0.82□□□□□ -2.28
RTN3O95197 snoU13.21-201ENST00000459368 105 ntBASIC0.82□□□□□ -2.28
RTN3O95197 MIR4714-201ENST00000580728 77 ntBASIC0.82□□□□□ -2.28
RTN3O95197 MIR3129-201ENST00000581095 76 ntBASIC0.82□□□□□ -2.28
RTN3O95197 MIR6866-201ENST00000638146 69 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 195.7 ms