Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 MIR4305-201ENST00000583252 102 ntBASIC0.07□□□□□ -2.4
SEMA3DO95025 MIR2909-201ENST00000617113 69 ntBASIC0.07□□□□□ -2.4
SEMA3DO95025 uc_338.22-201ENST00000622722 187 ntBASIC0.07□□□□□ -2.4
SEMA3DO95025 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.07□□□□□ -2.4
SEMA3DO95025 RNU6-888P-201ENST00000363010 101 ntBASIC0.06□□□□□ -2.4
SEMA3DO95025 RNU6-740P-201ENST00000364734 105 ntBASIC0.06□□□□□ -2.4
SEMA3DO95025 Y_RNA.572-201ENST00000384757 98 ntBASIC0.06□□□□□ -2.4
SEMA3DO95025 MIR644A-201ENST00000385262 94 ntBASIC0.06□□□□□ -2.4
SEMA3DO95025 MT-TF-201ENST00000387314 71 ntBASIC0.06□□□□□ -2.4
SEMA3DO95025 RNU6-1009P-201ENST00000390996 107 ntBASIC0.06□□□□□ -2.4
SEMA3DO95025 Y_RNA.645-201ENST00000391229 102 ntBASIC0.06□□□□□ -2.4
SEMA3DO95025 RNU6-121P-201ENST00000410525 99 ntBASIC0.06□□□□□ -2.4
SEMA3DO95025 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.06□□□□□ -2.4
SEMA3DO95025 RNU7-45P-201ENST00000459460 63 ntBASIC0.06□□□□□ -2.4
SEMA3DO95025 RNU6-998P-201ENST00000515894 101 ntBASIC0.06□□□□□ -2.4
SEMA3DO95025 RNU6-365P-201ENST00000517113 106 ntBASIC0.06□□□□□ -2.4
SEMA3DO95025 AC069113.3-201ENST00000521019 150 ntBASIC0.06□□□□□ -2.4
SEMA3DO95025 AC090574.1-201ENST00000623186 233 ntBASIC0.06□□□□□ -2.4
SEMA3DO95025 MIR4315-1-201ENST00000636800 73 ntBASIC0.06□□□□□ -2.4
SEMA3DO95025 MIR4315-2-201ENST00000640925 73 ntBASIC0.06□□□□□ -2.4
SEMA3DO95025 RNU6-923P-201ENST00000364753 107 ntBASIC0.05□□□□□ -2.4
SEMA3DO95025 Y_RNA.380-201ENST00000365663 111 ntBASIC0.05□□□□□ -2.4
SEMA3DO95025 Y_RNA.581-201ENST00000391017 97 ntBASIC0.05□□□□□ -2.4
SEMA3DO95025 SNORD93-201ENST00000408813 74 ntBASIC0.05□□□□□ -2.4
SEMA3DO95025 MTND4P19-201ENST00000446659 478 ntBASIC0.05□□□□□ -2.4
SEMA3DO95025 RNU7-96P-201ENST00000459535 64 ntBASIC0.05□□□□□ -2.4
SEMA3DO95025 AC131281.1-201ENST00000522984 164 ntBASIC0.05□□□□□ -2.4
SEMA3DO95025 AL008718.3-201ENST00000610217 321 ntBASIC0.05□□□□□ -2.4
SEMA3DO95025 AP001282.2-201ENST00000616149 309 ntBASIC0.05□□□□□ -2.4
SEMA3DO95025 MIR8066-201ENST00000617280 78 ntBASIC0.05□□□□□ -2.4
SEMA3DO95025 MIR411-201ENST00000362239 96 ntBASIC0.04□□□□□ -2.4
SEMA3DO95025 Y_RNA.24-201ENST00000362508 103 ntBASIC0.04□□□□□ -2.4
SEMA3DO95025 Y_RNA.31-201ENST00000362574 102 ntBASIC0.04□□□□□ -2.4
SEMA3DO95025 RNU6-290P-201ENST00000365212 101 ntBASIC0.04□□□□□ -2.4
SEMA3DO95025 Y_RNA.374-201ENST00000365606 101 ntBASIC0.04□□□□□ -2.4
SEMA3DO95025 Y_RNA.541-201ENST00000384640 113 ntBASIC0.04□□□□□ -2.4
SEMA3DO95025 RNU6-823P-201ENST00000391042 103 ntBASIC0.04□□□□□ -2.4
SEMA3DO95025 RNU4-83P-201ENST00000410863 133 ntBASIC0.04□□□□□ -2.4
SEMA3DO95025 Y_RNA.631-201ENST00000459607 101 ntBASIC0.04□□□□□ -2.4
SEMA3DO95025 TRBVB-201ENST00000477100 408 ntBASIC0.04□□□□□ -2.4
SEMA3DO95025 RNU6-504P-201ENST00000516568 104 ntBASIC0.04□□□□□ -2.4
SEMA3DO95025 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.04□□□□□ -2.4
SEMA3DO95025 MIR4795-201ENST00000584182 89 ntBASIC0.04□□□□□ -2.4
SEMA3DO95025 snoU18.1-201ENST00000629629 71 ntBASIC0.04□□□□□ -2.4
SEMA3DO95025 MIR369-201ENST00000362155 70 ntBASIC0.03□□□□□ -2.4
SEMA3DO95025 Y_RNA.42-201ENST00000362660 108 ntBASIC0.03□□□□□ -2.4
SEMA3DO95025 Y_RNA.66-201ENST00000362862 102 ntBASIC0.03□□□□□ -2.4
SEMA3DO95025 SNORA63.7-201ENST00000365579 123 ntBASIC0.03□□□□□ -2.4
SEMA3DO95025 RNU6-597P-201ENST00000365620 102 ntBASIC0.03□□□□□ -2.4
SEMA3DO95025 Y_RNA.440-201ENST00000384120 114 ntBASIC0.03□□□□□ -2.4
SEMA3DO95025 MIR215-201ENST00000384858 110 ntBASIC0.03□□□□□ -2.4
SEMA3DO95025 MIR526A2-201ENST00000390198 65 ntBASIC0.03□□□□□ -2.4
SEMA3DO95025 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC0.03□□□□□ -2.4
SEMA3DO95025 AC112693.2-201ENST00000556538 232 ntBASIC0.03□□□□□ -2.4
SEMA3DO95025 AC006006.1-201ENST00000603082 144 ntBASIC0.03□□□□□ -2.4
SEMA3DO95025 Y_RNA.802-201ENST00000614892 130 ntBASIC0.03□□□□□ -2.4
SEMA3DO95025 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.03□□□□□ -2.4
SEMA3DO95025 MIR6717-201ENST00000622747 73 ntBASIC0.03□□□□□ -2.4
SEMA3DO95025 SNORA25.1-201ENST00000362326 128 ntBASIC0.02□□□□□ -2.41
SEMA3DO95025 snoU2_19.2-201ENST00000363024 80 ntBASIC0.02□□□□□ -2.41
SEMA3DO95025 Y_RNA.91-201ENST00000363042 107 ntBASIC0.02□□□□□ -2.41
SEMA3DO95025 SNORD114-16-201ENST00000363044 70 ntBASIC0.02□□□□□ -2.41
SEMA3DO95025 RNU4-73P-201ENST00000363164 141 ntBASIC0.02□□□□□ -2.41
SEMA3DO95025 Y_RNA.217-201ENST00000364214 105 ntBASIC0.02□□□□□ -2.41
SEMA3DO95025 Y_RNA.280-201ENST00000364765 112 ntBASIC0.02□□□□□ -2.41
SEMA3DO95025 SNORA26.6-201ENST00000391256 115 ntBASIC0.02□□□□□ -2.41
SEMA3DO95025 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.02□□□□□ -2.41
SEMA3DO95025 Y_RNA.641-201ENST00000459414 105 ntBASIC0.02□□□□□ -2.41
SEMA3DO95025 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.02□□□□□ -2.41
SEMA3DO95025 RNA5SP268-201ENST00000516828 124 ntBASIC0.02□□□□□ -2.41
SEMA3DO95025 MIR5190-201ENST00000581537 80 ntBASIC0.02□□□□□ -2.41
SEMA3DO95025 AL133255.1-201ENST00000606374 441 ntBASIC0.02□□□□□ -2.41
SEMA3DO95025 Y_RNA.13-201ENST00000362403 112 ntBASIC0.01□□□□□ -2.41
SEMA3DO95025 Y_RNA.229-201ENST00000364347 113 ntBASIC0.01□□□□□ -2.41
SEMA3DO95025 RNU6-302P-201ENST00000365249 107 ntBASIC0.01□□□□□ -2.41
SEMA3DO95025 Y_RNA.395-201ENST00000383945 109 ntBASIC0.01□□□□□ -2.41
SEMA3DO95025 RNU6-1189P-201ENST00000383958 107 ntBASIC0.01□□□□□ -2.41
SEMA3DO95025 RNU6-514P-201ENST00000384208 107 ntBASIC0.01□□□□□ -2.41
SEMA3DO95025 RNU2-59P-201ENST00000410482 191 ntBASIC0.01□□□□□ -2.41
SEMA3DO95025 AL512326.2-201ENST00000426359 151 ntBASIC0.01□□□□□ -2.41
SEMA3DO95025 AC069271.1-201ENST00000445577 156 ntBASIC0.01□□□□□ -2.41
SEMA3DO95025 MTND3P22-201ENST00000510932 243 ntBASIC0.01□□□□□ -2.41
SEMA3DO95025 RNU6-469P-201ENST00000516253 101 ntBASIC0.01□□□□□ -2.41
SEMA3DO95025 Y_RNA.681-201ENST00000516445 113 ntBASIC0.01□□□□□ -2.41
SEMA3DO95025 AP003733.2-201ENST00000529409 171 ntBASIC0.01□□□□□ -2.41
SEMA3DO95025 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.01□□□□□ -2.41
SEMA3DO95025 AC090971.5-201ENST00000621102 293 ntBASIC0.01□□□□□ -2.41
SEMA3DO95025 MIR302B-201ENST00000362188 73 ntBASIC0□□□□□ -2.41
SEMA3DO95025 RNU6-403P-201ENST00000363163 104 ntBASIC0□□□□□ -2.41
SEMA3DO95025 RNA5SP214-201ENST00000363378 118 ntBASIC0□□□□□ -2.41
SEMA3DO95025 SNORA42.1-201ENST00000363515 137 ntBASIC0□□□□□ -2.41
SEMA3DO95025 RNU6-1099P-201ENST00000363533 107 ntBASIC0□□□□□ -2.41
SEMA3DO95025 Y_RNA.634-201ENST00000364811 113 ntBASIC0□□□□□ -2.41
SEMA3DO95025 RNU6-326P-201ENST00000365480 107 ntBASIC0□□□□□ -2.41
SEMA3DO95025 Y_RNA.389-201ENST00000383924 113 ntBASIC0□□□□□ -2.41
SEMA3DO95025 SNORA53-201ENST00000391141 249 ntBASIC0□□□□□ -2.41
SEMA3DO95025 MIR1252-201ENST00000408861 65 ntBASIC0□□□□□ -2.41
SEMA3DO95025 RNA5SP237-201ENST00000410414 113 ntBASIC0□□□□□ -2.41
SEMA3DO95025 ELOCP20-201ENST00000422460 345 ntBASIC0□□□□□ -2.41
SEMA3DO95025 SEPT7P4-201ENST00000437076 306 ntBASIC0□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 175.9 ms