Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 RPS29P24-201ENST00000486345 171 ntBASIC0.98□□□□□ -2.25
GPC4O75487 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.98□□□□□ -2.25
GPC4O75487 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.98□□□□□ -2.25
GPC4O75487 AC090425.1-201ENST00000610007 140 ntBASIC0.98□□□□□ -2.25
GPC4O75487 MIR6504-201ENST00000613520 61 ntBASIC0.98□□□□□ -2.25
GPC4O75487 AC106800.4-201ENST00000614905 153 ntBASIC0.98□□□□□ -2.25
GPC4O75487 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
GPC4O75487 Y_RNA.297-201ENST00000364950 91 ntBASIC0.97□□□□□ -2.25
GPC4O75487 RNU6-1189P-201ENST00000383958 107 ntBASIC0.97□□□□□ -2.25
GPC4O75487 Y_RNA.410-201ENST00000383992 113 ntBASIC0.97□□□□□ -2.25
GPC4O75487 Y_RNA.440-201ENST00000384120 114 ntBASIC0.97□□□□□ -2.25
GPC4O75487 Y_RNA.476-201ENST00000384347 108 ntBASIC0.97□□□□□ -2.25
GPC4O75487 RNU6ATAC23P-201ENST00000408448 123 ntBASIC0.97□□□□□ -2.25
GPC4O75487 Y_RNA.618-201ENST00000410949 107 ntBASIC0.97□□□□□ -2.25
GPC4O75487 MIR2115-201ENST00000516657 100 ntBASIC0.97□□□□□ -2.25
GPC4O75487 MIR8055-201ENST00000610739 97 ntBASIC0.97□□□□□ -2.25
GPC4O75487 AL391516.1-201ENST00000554380 2449 ntBASIC0.96□□□□□ -2.26
GPC4O75487 RNU6-1020P-201ENST00000363684 107 ntBASIC0.96□□□□□ -2.26
GPC4O75487 Y_RNA.226-201ENST00000364337 114 ntBASIC0.96□□□□□ -2.26
GPC4O75487 SNORD113.3-201ENST00000364630 78 ntBASIC0.96□□□□□ -2.26
GPC4O75487 SNORA2B-201ENST00000384583 137 ntBASIC0.96□□□□□ -2.26
GPC4O75487 RNU6-205P-201ENST00000390858 107 ntBASIC0.96□□□□□ -2.26
GPC4O75487 RNU6-918P-201ENST00000391219 106 ntBASIC0.96□□□□□ -2.26
GPC4O75487 RNA5SP247-201ENST00000411181 105 ntBASIC0.96□□□□□ -2.26
GPC4O75487 AC244023.1-201ENST00000426884 112 ntBASIC0.96□□□□□ -2.26
GPC4O75487 RNU7-73P-201ENST00000458743 63 ntBASIC0.96□□□□□ -2.26
GPC4O75487 RNU7-45P-201ENST00000459460 63 ntBASIC0.96□□□□□ -2.26
GPC4O75487 AC242498.1-201ENST00000604134 111 ntBASIC0.96□□□□□ -2.26
GPC4O75487 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
GPC4O75487 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.96□□□□□ -2.26
GPC4O75487 Y_RNA.121-201ENST00000363309 113 ntBASIC0.95□□□□□ -2.26
GPC4O75487 SNORD111-201ENST00000408139 94 ntBASIC0.95□□□□□ -2.26
GPC4O75487 RNU6-1190P-201ENST00000410811 104 ntBASIC0.95□□□□□ -2.26
GPC4O75487 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.95□□□□□ -2.26
GPC4O75487 AC015818.7-201ENST00000428754 109 ntBASIC0.95□□□□□ -2.26
GPC4O75487 AC087499.7-201ENST00000441958 109 ntBASIC0.95□□□□□ -2.26
GPC4O75487 PDCD5P2-201ENST00000507570 312 ntBASIC0.95□□□□□ -2.26
GPC4O75487 RNU6-1219P-201ENST00000516143 112 ntBASIC0.95□□□□□ -2.26
GPC4O75487 AC009779.6-201ENST00000603972 165 ntBASIC0.95□□□□□ -2.26
GPC4O75487 AC012676.2-201ENST00000619258 186 ntBASIC0.95□□□□□ -2.26
GPC4O75487 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.94□□□□□ -2.26
GPC4O75487 RNU6-1335P-201ENST00000365426 107 ntBASIC0.94□□□□□ -2.26
GPC4O75487 Y_RNA.515-201ENST00000384535 112 ntBASIC0.94□□□□□ -2.26
GPC4O75487 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
GPC4O75487 AL035398.1-201ENST00000430869 322 ntBASIC0.94□□□□□ -2.26
GPC4O75487 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.94□□□□□ -2.26
GPC4O75487 RNU2-11P-201ENST00000459191 187 ntBASIC0.94□□□□□ -2.26
GPC4O75487 snoU13.21-201ENST00000459368 105 ntBASIC0.94□□□□□ -2.26
GPC4O75487 RPL39P28-201ENST00000465655 155 ntBASIC0.94□□□□□ -2.26
GPC4O75487 UBL5P1-201ENST00000507979 193 ntBASIC0.94□□□□□ -2.26
GPC4O75487 RNU6-998P-201ENST00000515894 101 ntBASIC0.94□□□□□ -2.26
GPC4O75487 RNU6-138P-201ENST00000515952 107 ntBASIC0.94□□□□□ -2.26
GPC4O75487 MIR96-201ENST00000362288 78 ntBASIC0.93□□□□□ -2.26
GPC4O75487 RNU6-978P-201ENST00000364371 103 ntBASIC0.93□□□□□ -2.26
GPC4O75487 RNU6-580P-201ENST00000365159 107 ntBASIC0.93□□□□□ -2.26
GPC4O75487 MIR1287-201ENST00000408492 90 ntBASIC0.93□□□□□ -2.26
GPC4O75487 Y_RNA.793-201ENST00000411222 111 ntBASIC0.93□□□□□ -2.26
GPC4O75487 ACA64.5-201ENST00000516207 127 ntBASIC0.93□□□□□ -2.26
GPC4O75487 RNA5SP255-201ENST00000516370 107 ntBASIC0.93□□□□□ -2.26
GPC4O75487 MIR378D2-201ENST00000580636 98 ntBASIC0.93□□□□□ -2.26
GPC4O75487 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.93□□□□□ -2.26
GPC4O75487 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
GPC4O75487 Y_RNA.168-201ENST00000363740 102 ntBASIC0.92□□□□□ -2.26
GPC4O75487 RNU6-643P-201ENST00000384018 107 ntBASIC0.92□□□□□ -2.26
GPC4O75487 Y_RNA.521-201ENST00000384560 114 ntBASIC0.92□□□□□ -2.26
GPC4O75487 MT-TN-201ENST00000387400 73 ntBASIC0.92□□□□□ -2.26
GPC4O75487 Y_RNA.644-201ENST00000459006 113 ntBASIC0.92□□□□□ -2.26
GPC4O75487 Y_RNA.674-201ENST00000516362 113 ntBASIC0.92□□□□□ -2.26
GPC4O75487 RNU7-53P-201ENST00000516705 60 ntBASIC0.92□□□□□ -2.26
GPC4O75487 MIR4661-201ENST00000582720 75 ntBASIC0.92□□□□□ -2.26
GPC4O75487 AL365205.2-201ENST00000594586 68 ntBASIC0.92□□□□□ -2.26
GPC4O75487 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.92□□□□□ -2.26
GPC4O75487 Z97988.1-201ENST00000637697 135 ntBASIC0.92□□□□□ -2.26
GPC4O75487 AL596211.1-201ENST00000569873 2277 ntBASIC0.92□□□□□ -2.26
GPC4O75487 SNORD114-27-201ENST00000363766 70 ntBASIC0.91□□□□□ -2.26
GPC4O75487 Y_RNA.191-201ENST00000363972 113 ntBASIC0.91□□□□□ -2.26
GPC4O75487 RNU6-275P-201ENST00000364910 107 ntBASIC0.91□□□□□ -2.26
GPC4O75487 Y_RNA.351-201ENST00000365436 96 ntBASIC0.91□□□□□ -2.26
GPC4O75487 Y_RNA.542-201ENST00000384641 111 ntBASIC0.91□□□□□ -2.26
GPC4O75487 Y_RNA.552-201ENST00000384665 112 ntBASIC0.91□□□□□ -2.26
GPC4O75487 MIR532-201ENST00000385025 91 ntBASIC0.91□□□□□ -2.26
GPC4O75487 SNORD89-201ENST00000390981 114 ntBASIC0.91□□□□□ -2.26
GPC4O75487 FABP5P4-201ENST00000437203 171 ntBASIC0.91□□□□□ -2.26
GPC4O75487 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.91□□□□□ -2.26
GPC4O75487 RNU7-96P-201ENST00000459535 64 ntBASIC0.91□□□□□ -2.26
GPC4O75487 SNORD116-25-201ENST00000516517 92 ntBASIC0.91□□□□□ -2.26
GPC4O75487 RNU6-861P-201ENST00000516745 106 ntBASIC0.91□□□□□ -2.26
GPC4O75487 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.91□□□□□ -2.26
GPC4O75487 AP002392.1-201ENST00000537692 208 ntBASIC0.91□□□□□ -2.26
GPC4O75487 MIR5197-201ENST00000583721 112 ntBASIC0.91□□□□□ -2.26
GPC4O75487 uc_338.6-201ENST00000613544 171 ntBASIC0.91□□□□□ -2.26
GPC4O75487 MIR6767-201ENST00000637302 66 ntBASIC0.91□□□□□ -2.26
GPC4O75487 MIR302B-201ENST00000362188 73 ntBASIC0.9□□□□□ -2.27
GPC4O75487 Y_RNA.233-201ENST00000364407 101 ntBASIC0.9□□□□□ -2.27
GPC4O75487 RNU1-93P-201ENST00000364704 169 ntBASIC0.9□□□□□ -2.27
GPC4O75487 RNU4-16P-201ENST00000364737 141 ntBASIC0.9□□□□□ -2.27
GPC4O75487 RPS3AP1-201ENST00000413190 320 ntBASIC0.9□□□□□ -2.27
GPC4O75487 MIR4452-201ENST00000583004 71 ntBASIC0.9□□□□□ -2.27
GPC4O75487 AP000753.3-201ENST00000604083 169 ntBASIC0.9□□□□□ -2.27
GPC4O75487 AC141273.2-201ENST00000618989 130 ntBASIC0.9□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms