Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 RNU6-457P-201ENST00000363999 107 ntBASIC2.2□□□□□ -2.06
VAMP4O75379 RNU6-1067P-201ENST00000384752 107 ntBASIC2.2□□□□□ -2.06
VAMP4O75379 AC007012.1-201ENST00000567192 175 ntBASIC2.2□□□□□ -2.06
VAMP4O75379 MIR4679-2-201ENST00000578358 77 ntBASIC2.2□□□□□ -2.06
VAMP4O75379 AL391516.1-201ENST00000554380 2449 ntBASIC2.2□□□□□ -2.06
VAMP4O75379 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
VAMP4O75379 MIR342-201ENST00000362212 99 ntBASIC2.19□□□□□ -2.06
VAMP4O75379 Y_RNA.281-201ENST00000364774 94 ntBASIC2.19□□□□□ -2.06
VAMP4O75379 RNU6-203P-201ENST00000384038 104 ntBASIC2.19□□□□□ -2.06
VAMP4O75379 AC004965.1-201ENST00000413033 213 ntBASIC2.19□□□□□ -2.06
VAMP4O75379 SNX2P2-201ENST00000424553 323 ntBASIC2.19□□□□□ -2.06
VAMP4O75379 RNU2-11P-201ENST00000459191 187 ntBASIC2.19□□□□□ -2.06
VAMP4O75379 RNU7-164P-201ENST00000459221 62 ntBASIC2.19□□□□□ -2.06
VAMP4O75379 RNA5SP57-201ENST00000459463 123 ntBASIC2.19□□□□□ -2.06
VAMP4O75379 RNU6-412P-201ENST00000516434 106 ntBASIC2.19□□□□□ -2.06
VAMP4O75379 RNA5SP364-201ENST00000516938 78 ntBASIC2.19□□□□□ -2.06
VAMP4O75379 SNORA74.3-201ENST00000517108 154 ntBASIC2.19□□□□□ -2.06
VAMP4O75379 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.19□□□□□ -2.06
VAMP4O75379 RNY4P6-201ENST00000363667 96 ntBASIC2.18□□□□□ -2.06
VAMP4O75379 Y_RNA.537-201ENST00000384626 109 ntBASIC2.18□□□□□ -2.06
VAMP4O75379 MIR759-201ENST00000390224 91 ntBASIC2.18□□□□□ -2.06
VAMP4O75379 AL161935.2-201ENST00000414627 60 ntBASIC2.18□□□□□ -2.06
VAMP4O75379 RPS29P29-201ENST00000456396 171 ntBASIC2.18□□□□□ -2.06
VAMP4O75379 snoU13.23-201ENST00000458863 104 ntBASIC2.18□□□□□ -2.06
VAMP4O75379 AC015712.3-201ENST00000559380 164 ntBASIC2.18□□□□□ -2.06
VAMP4O75379 FAM106DP-201ENST00000586416 501 ntBASIC2.18□□□□□ -2.06
VAMP4O75379 SNORA63.4-201ENST00000362763 126 ntBASIC2.17□□□□□ -2.06
VAMP4O75379 Y_RNA.213-201ENST00000364178 111 ntBASIC2.17□□□□□ -2.06
VAMP4O75379 RNU6-1319P-201ENST00000390855 104 ntBASIC2.17□□□□□ -2.06
VAMP4O75379 RNU6-747P-201ENST00000390928 104 ntBASIC2.17□□□□□ -2.06
VAMP4O75379 RNU6-241P-201ENST00000391148 104 ntBASIC2.17□□□□□ -2.06
VAMP4O75379 RNU6-177P-201ENST00000411257 104 ntBASIC2.17□□□□□ -2.06
VAMP4O75379 RNU7-123P-201ENST00000515911 60 ntBASIC2.17□□□□□ -2.06
VAMP4O75379 RNU7-53P-201ENST00000516705 60 ntBASIC2.17□□□□□ -2.06
VAMP4O75379 SUMO2P16-201ENST00000519475 264 ntBASIC2.17□□□□□ -2.06
VAMP4O75379 MIR4524B-201ENST00000581569 115 ntBASIC2.17□□□□□ -2.06
VAMP4O75379 HSPE1P19-201ENST00000603327 295 ntBASIC2.17□□□□□ -2.06
VAMP4O75379 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.17□□□□□ -2.06
VAMP4O75379 AC021613.1-201ENST00000623880 111 ntBASIC2.17□□□□□ -2.06
VAMP4O75379 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.17□□□□□ -2.06
VAMP4O75379 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
VAMP4O75379 MIR653-201ENST00000385279 96 ntBASIC2.16□□□□□ -2.06
VAMP4O75379 RNU7-73P-201ENST00000458743 63 ntBASIC2.16□□□□□ -2.06
VAMP4O75379 RNU6-893P-201ENST00000458841 100 ntBASIC2.16□□□□□ -2.06
VAMP4O75379 RNU7-67P-201ENST00000459003 62 ntBASIC2.16□□□□□ -2.06
VAMP4O75379 RNU6-237P-201ENST00000515985 71 ntBASIC2.16□□□□□ -2.06
VAMP4O75379 RNU2-35P-201ENST00000516446 142 ntBASIC2.16□□□□□ -2.06
VAMP4O75379 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.16□□□□□ -2.06
VAMP4O75379 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.16□□□□□ -2.06
VAMP4O75379 AC022254.1-201ENST00000567857 235 ntBASIC2.16□□□□□ -2.06
VAMP4O75379 DEFB122-202ENST00000569013 197 ntBASIC2.16□□□□□ -2.06
VAMP4O75379 MIR3152-201ENST00000579801 74 ntBASIC2.16□□□□□ -2.06
VAMP4O75379 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.16□□□□□ -2.06
VAMP4O75379 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
VAMP4O75379 SNORD28B-201ENST00000390993 75 ntBASIC2.15□□□□□ -2.07
VAMP4O75379 RNA5SP144-201ENST00000410846 116 ntBASIC2.15□□□□□ -2.07
VAMP4O75379 JTBP1-201ENST00000441314 247 ntBASIC2.15□□□□□ -2.07
VAMP4O75379 RNU6-958P-201ENST00000516995 106 ntBASIC2.15□□□□□ -2.07
VAMP4O75379 MIR3618-201ENST00000580330 88 ntBASIC2.15□□□□□ -2.07
VAMP4O75379 MIR4791-201ENST00000607666 84 ntBASIC2.15□□□□□ -2.07
VAMP4O75379 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.15□□□□□ -2.07
VAMP4O75379 RNU6-661P-201ENST00000362409 107 ntBASIC2.14□□□□□ -2.07
VAMP4O75379 RNA5SP261-201ENST00000410536 106 ntBASIC2.14□□□□□ -2.07
VAMP4O75379 RNU6-917P-201ENST00000516294 104 ntBASIC2.14□□□□□ -2.07
VAMP4O75379 RNU7-43P-201ENST00000516554 64 ntBASIC2.14□□□□□ -2.07
VAMP4O75379 AC243994.1-201ENST00000618627 109 ntBASIC2.14□□□□□ -2.07
VAMP4O75379 Y_RNA.85-201ENST00000363014 111 ntBASIC2.13□□□□□ -2.07
VAMP4O75379 RNU6-414P-201ENST00000363705 104 ntBASIC2.13□□□□□ -2.07
VAMP4O75379 RNU6-1104P-201ENST00000384723 104 ntBASIC2.13□□□□□ -2.07
VAMP4O75379 MT-TI-201ENST00000387365 69 ntBASIC2.13□□□□□ -2.07
VAMP4O75379 AL022718.1-201ENST00000412004 84 ntBASIC2.13□□□□□ -2.07
VAMP4O75379 SNORA25.15-201ENST00000516487 89 ntBASIC2.13□□□□□ -2.07
VAMP4O75379 DNAJC19P9-201ENST00000555084 351 ntBASIC2.13□□□□□ -2.07
VAMP4O75379 uc_338.20-201ENST00000621563 178 ntBASIC2.13□□□□□ -2.07
VAMP4O75379 AC095038.3-201ENST00000634439 195 ntBASIC2.13□□□□□ -2.07
VAMP4O75379 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
VAMP4O75379 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.12□□□□□ -2.07
VAMP4O75379 RNU1-17P-201ENST00000363022 152 ntBASIC2.12□□□□□ -2.07
VAMP4O75379 RNU4-16P-201ENST00000364737 141 ntBASIC2.12□□□□□ -2.07
VAMP4O75379 Y_RNA.430-201ENST00000384081 110 ntBASIC2.12□□□□□ -2.07
VAMP4O75379 POLR2J4-204ENST00000418424 324 ntBASIC2.12□□□□□ -2.07
VAMP4O75379 RNA5SP432-201ENST00000362480 116 ntBASIC2.11□□□□□ -2.07
VAMP4O75379 RNA5SP190-201ENST00000365222 118 ntBASIC2.11□□□□□ -2.07
VAMP4O75379 Y_RNA.531-201ENST00000384589 121 ntBASIC2.11□□□□□ -2.07
VAMP4O75379 SNORD12C-201ENST00000386307 89 ntBASIC2.11□□□□□ -2.07
VAMP4O75379 SNORA26.6-201ENST00000391256 115 ntBASIC2.11□□□□□ -2.07
VAMP4O75379 snoU13.16-201ENST00000459350 104 ntBASIC2.11□□□□□ -2.07
VAMP4O75379 AC108210.2-201ENST00000503681 201 ntBASIC2.11□□□□□ -2.07
VAMP4O75379 RNU6-322P-201ENST00000516010 103 ntBASIC2.11□□□□□ -2.07
VAMP4O75379 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.11□□□□□ -2.07
VAMP4O75379 AC004812.1-201ENST00000540773 146 ntBASIC2.11□□□□□ -2.07
VAMP4O75379 AC024614.2-201ENST00000577584 372 ntBASIC2.11□□□□□ -2.07
VAMP4O75379 MIR3163-201ENST00000581592 73 ntBASIC2.11□□□□□ -2.07
VAMP4O75379 MIR4713-201ENST00000582691 75 ntBASIC2.11□□□□□ -2.07
VAMP4O75379 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
VAMP4O75379 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
VAMP4O75379 SNORD115-2-201ENST00000362842 82 ntBASIC2.1□□□□□ -2.07
VAMP4O75379 RNU6-1107P-201ENST00000364817 104 ntBASIC2.1□□□□□ -2.07
VAMP4O75379 SNORD115-20-201ENST00000365099 82 ntBASIC2.1□□□□□ -2.07
VAMP4O75379 RPL31P63-201ENST00000422565 375 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 178.3 ms