Protein–RNA interactions for Protein: O43542

XRCC3, DNA repair protein XRCC3, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3O43542 Y_RNA.797-201ENST00000515977 94 ntBASIC0.91□□□□□ -2.26
XRCC3O43542 MIR4295-201ENST00000585286 85 ntBASIC0.91□□□□□ -2.26
XRCC3O43542 AL020996.3-201ENST00000606617 222 ntBASIC0.91□□□□□ -2.26
XRCC3O43542 MIR8055-201ENST00000610739 97 ntBASIC0.91□□□□□ -2.26
XRCC3O43542 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.9□□□□□ -2.27
XRCC3O43542 Y_RNA.168-201ENST00000363740 102 ntBASIC0.9□□□□□ -2.27
XRCC3O43542 RNU6-1292P-201ENST00000383856 107 ntBASIC0.9□□□□□ -2.27
XRCC3O43542 MIR7-2-201ENST00000384970 110 ntBASIC0.9□□□□□ -2.27
XRCC3O43542 RNU6-913P-201ENST00000390913 95 ntBASIC0.9□□□□□ -2.27
XRCC3O43542 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.9□□□□□ -2.27
XRCC3O43542 PDCD5P2-201ENST00000507570 312 ntBASIC0.9□□□□□ -2.27
XRCC3O43542 RNU6-998P-201ENST00000515894 101 ntBASIC0.9□□□□□ -2.27
XRCC3O43542 AL365205.2-201ENST00000594586 68 ntBASIC0.9□□□□□ -2.27
XRCC3O43542 MIR6515-201ENST00000619843 57 ntBASIC0.9□□□□□ -2.27
XRCC3O43542 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
XRCC3O43542 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
XRCC3O43542 MIR377-201ENST00000362145 69 ntBASIC0.89□□□□□ -2.27
XRCC3O43542 RNU6-580P-201ENST00000365159 107 ntBASIC0.89□□□□□ -2.27
XRCC3O43542 RNU6-125P-201ENST00000384505 107 ntBASIC0.89□□□□□ -2.27
XRCC3O43542 RNU4-70P-201ENST00000384579 139 ntBASIC0.89□□□□□ -2.27
XRCC3O43542 AC090844.1-201ENST00000422019 156 ntBASIC0.89□□□□□ -2.27
XRCC3O43542 RPS29P1-201ENST00000465274 159 ntBASIC0.89□□□□□ -2.27
XRCC3O43542 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.89□□□□□ -2.27
XRCC3O43542 SNORD116-25-201ENST00000516517 92 ntBASIC0.89□□□□□ -2.27
XRCC3O43542 MIR378D2-201ENST00000580636 98 ntBASIC0.89□□□□□ -2.27
XRCC3O43542 MIR96-201ENST00000362288 78 ntBASIC0.88□□□□□ -2.27
XRCC3O43542 Y_RNA.200-201ENST00000364018 102 ntBASIC0.88□□□□□ -2.27
XRCC3O43542 SNORA2B-201ENST00000384583 137 ntBASIC0.88□□□□□ -2.27
XRCC3O43542 RNA5SP95-201ENST00000410319 137 ntBASIC0.88□□□□□ -2.27
XRCC3O43542 Y_RNA.618-201ENST00000410949 107 ntBASIC0.88□□□□□ -2.27
XRCC3O43542 POLR2J4-204ENST00000418424 324 ntBASIC0.88□□□□□ -2.27
XRCC3O43542 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.88□□□□□ -2.27
XRCC3O43542 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.88□□□□□ -2.27
XRCC3O43542 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.88□□□□□ -2.27
XRCC3O43542 RNA5SP255-201ENST00000516370 107 ntBASIC0.88□□□□□ -2.27
XRCC3O43542 MIR3129-201ENST00000581095 76 ntBASIC0.88□□□□□ -2.27
XRCC3O43542 MIR4264-201ENST00000583520 66 ntBASIC0.88□□□□□ -2.27
XRCC3O43542 AC009779.6-201ENST00000603972 165 ntBASIC0.88□□□□□ -2.27
XRCC3O43542 AP000753.3-201ENST00000604083 169 ntBASIC0.88□□□□□ -2.27
XRCC3O43542 SNORD114-21-201ENST00000606412 72 ntBASIC0.88□□□□□ -2.27
XRCC3O43542 Z97988.1-201ENST00000637697 135 ntBASIC0.88□□□□□ -2.27
XRCC3O43542 Y_RNA.182-201ENST00000363880 111 ntBASIC0.87□□□□□ -2.27
XRCC3O43542 RNU6-978P-201ENST00000364371 103 ntBASIC0.87□□□□□ -2.27
XRCC3O43542 RNU6-275P-201ENST00000364910 107 ntBASIC0.87□□□□□ -2.27
XRCC3O43542 Y_RNA.435-201ENST00000384095 112 ntBASIC0.87□□□□□ -2.27
XRCC3O43542 Y_RNA.489-201ENST00000384410 101 ntBASIC0.87□□□□□ -2.27
XRCC3O43542 RNU6-918P-201ENST00000391219 106 ntBASIC0.87□□□□□ -2.27
XRCC3O43542 AC244023.1-201ENST00000426884 112 ntBASIC0.87□□□□□ -2.27
XRCC3O43542 RNU2-11P-201ENST00000459191 187 ntBASIC0.87□□□□□ -2.27
XRCC3O43542 U7.7-201ENST00000459276 60 ntBASIC0.87□□□□□ -2.27
XRCC3O43542 MIR5197-201ENST00000583721 112 ntBASIC0.87□□□□□ -2.27
XRCC3O43542 AC242498.1-201ENST00000604134 111 ntBASIC0.87□□□□□ -2.27
XRCC3O43542 RNU6-94P-201ENST00000607728 107 ntBASIC0.87□□□□□ -2.27
XRCC3O43542 MIR376A2-201ENST00000636782 80 ntBASIC0.87□□□□□ -2.27
XRCC3O43542 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
XRCC3O43542 MIR411-201ENST00000362239 96 ntBASIC0.86□□□□□ -2.27
XRCC3O43542 Y_RNA.75-201ENST00000362927 97 ntBASIC0.86□□□□□ -2.27
XRCC3O43542 Y_RNA.83-201ENST00000363005 113 ntBASIC0.86□□□□□ -2.27
XRCC3O43542 RNU1-36P-201ENST00000365130 165 ntBASIC0.86□□□□□ -2.27
XRCC3O43542 SNORD38B-201ENST00000384690 67 ntBASIC0.86□□□□□ -2.27
XRCC3O43542 MIR520E-201ENST00000384867 87 ntBASIC0.86□□□□□ -2.27
XRCC3O43542 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.86□□□□□ -2.27
XRCC3O43542 AC087343.1-201ENST00000477341 475 ntBASIC0.86□□□□□ -2.27
XRCC3O43542 RNA5SP480-201ENST00000516840 109 ntBASIC0.86□□□□□ -2.27
XRCC3O43542 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.86□□□□□ -2.27
XRCC3O43542 Z83818.1-201ENST00000603584 150 ntBASIC0.86□□□□□ -2.27
XRCC3O43542 SNORD38B-202ENST00000625943 69 ntBASIC0.86□□□□□ -2.27
XRCC3O43542 Y_RNA.401-201ENST00000383965 117 ntBASIC0.85□□□□□ -2.27
XRCC3O43542 RNU6-643P-201ENST00000384018 107 ntBASIC0.85□□□□□ -2.27
XRCC3O43542 MIR548I3-201ENST00000408378 149 ntBASIC0.85□□□□□ -2.27
XRCC3O43542 AL138752.1-201ENST00000452964 351 ntBASIC0.85□□□□□ -2.27
XRCC3O43542 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.85□□□□□ -2.27
XRCC3O43542 RNU6-1110P-201ENST00000516462 101 ntBASIC0.85□□□□□ -2.27
XRCC3O43542 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.85□□□□□ -2.27
XRCC3O43542 Y_RNA.188-201ENST00000363952 111 ntBASIC0.84□□□□□ -2.27
XRCC3O43542 RNU6-1187P-201ENST00000364771 110 ntBASIC0.84□□□□□ -2.27
XRCC3O43542 Y_RNA.351-201ENST00000365436 96 ntBASIC0.84□□□□□ -2.27
XRCC3O43542 Y_RNA.412-201ENST00000384001 104 ntBASIC0.84□□□□□ -2.27
XRCC3O43542 MT-TG-201ENST00000387429 68 ntBASIC0.84□□□□□ -2.27
XRCC3O43542 snosnR66.1-201ENST00000391095 99 ntBASIC0.84□□□□□ -2.27
XRCC3O43542 RNU6-994P-201ENST00000410507 111 ntBASIC0.84□□□□□ -2.27
XRCC3O43542 RPS3AP1-201ENST00000413190 320 ntBASIC0.84□□□□□ -2.27
XRCC3O43542 AC067940.1-201ENST00000458411 300 ntBASIC0.84□□□□□ -2.27
XRCC3O43542 RNU7-80P-201ENST00000459562 61 ntBASIC0.84□□□□□ -2.27
XRCC3O43542 MRPS18CP4-201ENST00000535821 231 ntBASIC0.84□□□□□ -2.27
XRCC3O43542 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.84□□□□□ -2.27
XRCC3O43542 U6.106-201ENST00000636360 105 ntBASIC0.84□□□□□ -2.27
XRCC3O43542 RNU4-38P-201ENST00000364472 129 ntBASIC0.83□□□□□ -2.28
XRCC3O43542 SNORA1.1-201ENST00000364671 133 ntBASIC0.83□□□□□ -2.28
XRCC3O43542 RNU6-205P-201ENST00000390858 107 ntBASIC0.83□□□□□ -2.28
XRCC3O43542 HMGN1P33-201ENST00000432945 451 ntBASIC0.83□□□□□ -2.28
XRCC3O43542 MIR151B-201ENST00000584249 96 ntBASIC0.83□□□□□ -2.28
XRCC3O43542 AL136317.1-201ENST00000612653 226 ntBASIC0.83□□□□□ -2.28
XRCC3O43542 AC141273.2-201ENST00000618989 130 ntBASIC0.83□□□□□ -2.28
XRCC3O43542 RNU6-1020P-201ENST00000363684 107 ntBASIC0.82□□□□□ -2.28
XRCC3O43542 Y_RNA.454-201ENST00000384224 113 ntBASIC0.82□□□□□ -2.28
XRCC3O43542 MIR624-201ENST00000385217 97 ntBASIC0.82□□□□□ -2.28
XRCC3O43542 SNORD89-201ENST00000390981 114 ntBASIC0.82□□□□□ -2.28
XRCC3O43542 MIR1827-201ENST00000408549 66 ntBASIC0.82□□□□□ -2.28
XRCC3O43542 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 177.1 ms