Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 SNORD115-1-201ENST00000364961 82 ntBASIC1.77□□□□□ -2.13
PROM1O43490 SNORD115-26-201ENST00000365067 82 ntBASIC1.77□□□□□ -2.13
PROM1O43490 SNORD115-10-201ENST00000365073 81 ntBASIC1.77□□□□□ -2.13
PROM1O43490 SNORD115-43-201ENST00000365503 82 ntBASIC1.77□□□□□ -2.13
PROM1O43490 Y_RNA.370-201ENST00000365589 108 ntBASIC1.77□□□□□ -2.13
PROM1O43490 SNORD115-36-201ENST00000365629 82 ntBASIC1.77□□□□□ -2.13
PROM1O43490 RNU6-439P-201ENST00000384188 106 ntBASIC1.77□□□□□ -2.13
PROM1O43490 RNY1P6-201ENST00000384193 109 ntBASIC1.77□□□□□ -2.13
PROM1O43490 Y_RNA.494-201ENST00000384432 111 ntBASIC1.77□□□□□ -2.13
PROM1O43490 Y_RNA.508-201ENST00000384502 114 ntBASIC1.77□□□□□ -2.13
PROM1O43490 RPS29P24-201ENST00000486345 171 ntBASIC1.77□□□□□ -2.13
PROM1O43490 SNORD115-40-201ENST00000606510 82 ntBASIC1.77□□□□□ -2.13
PROM1O43490 MIR6129-201ENST00000616087 109 ntBASIC1.77□□□□□ -2.13
PROM1O43490 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.77□□□□□ -2.13
PROM1O43490 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
PROM1O43490 RNU6-1123P-201ENST00000362347 106 ntBASIC1.76□□□□□ -2.13
PROM1O43490 RNU6-215P-201ENST00000365169 102 ntBASIC1.76□□□□□ -2.13
PROM1O43490 Y_RNA.346-201ENST00000365385 112 ntBASIC1.76□□□□□ -2.13
PROM1O43490 MIR548A3-201ENST00000385297 97 ntBASIC1.76□□□□□ -2.13
PROM1O43490 SNORD123-201ENST00000459473 70 ntBASIC1.76□□□□□ -2.13
PROM1O43490 AC021443.1-201ENST00000604478 211 ntBASIC1.76□□□□□ -2.13
PROM1O43490 AL670379.3-201ENST00000605040 251 ntBASIC1.76□□□□□ -2.13
PROM1O43490 snoU13.31-201ENST00000607291 104 ntBASIC1.76□□□□□ -2.13
PROM1O43490 RNA5SP259-201ENST00000365541 109 ntBASIC1.75□□□□□ -2.13
PROM1O43490 RNU6-1144P-201ENST00000384247 104 ntBASIC1.75□□□□□ -2.13
PROM1O43490 Y_RNA.528-201ENST00000384575 108 ntBASIC1.75□□□□□ -2.13
PROM1O43490 AL445685.2-201ENST00000422551 342 ntBASIC1.75□□□□□ -2.13
PROM1O43490 AL035398.1-201ENST00000430869 322 ntBASIC1.75□□□□□ -2.13
PROM1O43490 RNU7-67P-201ENST00000459003 62 ntBASIC1.75□□□□□ -2.13
PROM1O43490 RNU2-11P-201ENST00000459191 187 ntBASIC1.75□□□□□ -2.13
PROM1O43490 RNU7-96P-201ENST00000459535 64 ntBASIC1.75□□□□□ -2.13
PROM1O43490 RNU6-998P-201ENST00000515894 101 ntBASIC1.75□□□□□ -2.13
PROM1O43490 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.75□□□□□ -2.13
PROM1O43490 HSPE1P19-201ENST00000603327 295 ntBASIC1.75□□□□□ -2.13
PROM1O43490 AC095038.3-201ENST00000634439 195 ntBASIC1.75□□□□□ -2.13
PROM1O43490 MTND5P18-201ENST00000445624 1801 ntBASIC1.75□□□□□ -2.13
PROM1O43490 RNU6-349P-201ENST00000362402 107 ntBASIC1.74□□□□□ -2.13
PROM1O43490 Y_RNA.81-201ENST00000362997 102 ntBASIC1.74□□□□□ -2.13
PROM1O43490 MIR570-201ENST00000384917 97 ntBASIC1.74□□□□□ -2.13
PROM1O43490 SNORD28B-201ENST00000390993 75 ntBASIC1.74□□□□□ -2.13
PROM1O43490 SNORA17.3-201ENST00000391159 129 ntBASIC1.74□□□□□ -2.13
PROM1O43490 AC004965.1-201ENST00000413033 213 ntBASIC1.74□□□□□ -2.13
PROM1O43490 RNU6-919P-201ENST00000516731 104 ntBASIC1.74□□□□□ -2.13
PROM1O43490 RNU6-958P-201ENST00000516995 106 ntBASIC1.74□□□□□ -2.13
PROM1O43490 MIR4285-201ENST00000581001 85 ntBASIC1.74□□□□□ -2.13
PROM1O43490 MIR8074-201ENST00000615081 81 ntBASIC1.74□□□□□ -2.13
PROM1O43490 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.74□□□□□ -2.13
PROM1O43490 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
PROM1O43490 MIR378A-201ENST00000362177 66 ntBASIC1.73□□□□□ -2.13
PROM1O43490 SNORA16.1-201ENST00000364597 132 ntBASIC1.73□□□□□ -2.13
PROM1O43490 RNU6-44P-201ENST00000384045 107 ntBASIC1.73□□□□□ -2.13
PROM1O43490 SNORA70.7-201ENST00000384159 133 ntBASIC1.73□□□□□ -2.13
PROM1O43490 RNU6-429P-201ENST00000384582 108 ntBASIC1.73□□□□□ -2.13
PROM1O43490 MIR548A1-201ENST00000385041 97 ntBASIC1.73□□□□□ -2.13
PROM1O43490 MIR513A1-201ENST00000385138 129 ntBASIC1.73□□□□□ -2.13
PROM1O43490 AL035461.1-201ENST00000421490 332 ntBASIC1.73□□□□□ -2.13
PROM1O43490 AC245517.4-201ENST00000448601 281 ntBASIC1.73□□□□□ -2.13
PROM1O43490 Y_RNA.649-201ENST00000459077 103 ntBASIC1.73□□□□□ -2.13
PROM1O43490 RPS29P11-201ENST00000496507 171 ntBASIC1.73□□□□□ -2.13
PROM1O43490 AC024614.2-201ENST00000577584 372 ntBASIC1.73□□□□□ -2.13
PROM1O43490 MIR548AR-201ENST00000582191 57 ntBASIC1.73□□□□□ -2.13
PROM1O43490 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
PROM1O43490 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
PROM1O43490 RNA5SP136-201ENST00000410906 107 ntBASIC1.72□□□□□ -2.13
PROM1O43490 JTBP1-201ENST00000441314 247 ntBASIC1.72□□□□□ -2.13
PROM1O43490 RNU7-164P-201ENST00000459221 62 ntBASIC1.72□□□□□ -2.13
PROM1O43490 RNU6-917P-201ENST00000516294 104 ntBASIC1.72□□□□□ -2.13
PROM1O43490 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.72□□□□□ -2.13
PROM1O43490 RNY4P20-201ENST00000516678 93 ntBASIC1.72□□□□□ -2.13
PROM1O43490 SNORD116-21-201ENST00000384507 92 ntBASIC1.71□□□□□ -2.14
PROM1O43490 RNU6-1067P-201ENST00000384752 107 ntBASIC1.71□□□□□ -2.14
PROM1O43490 MIRLET7F2-201ENST00000385277 83 ntBASIC1.71□□□□□ -2.14
PROM1O43490 RNU7-45P-201ENST00000459460 63 ntBASIC1.71□□□□□ -2.14
PROM1O43490 RNU6-322P-201ENST00000516010 103 ntBASIC1.71□□□□□ -2.14
PROM1O43490 RNU7-53P-201ENST00000516705 60 ntBASIC1.71□□□□□ -2.14
PROM1O43490 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.71□□□□□ -2.14
PROM1O43490 AC243994.1-201ENST00000618627 109 ntBASIC1.71□□□□□ -2.14
PROM1O43490 AL442644.1-201ENST00000454390 3105 ntBASIC1.71□□□□□ -2.14
PROM1O43490 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
PROM1O43490 MIR194-1-201ENST00000384892 85 ntBASIC1.7□□□□□ -2.14
PROM1O43490 MIR9-3-201ENST00000385084 90 ntBASIC1.7□□□□□ -2.14
PROM1O43490 RPS29P29-201ENST00000456396 171 ntBASIC1.7□□□□□ -2.14
PROM1O43490 SNORA74.3-201ENST00000517108 154 ntBASIC1.7□□□□□ -2.14
PROM1O43490 MIR4419B-201ENST00000577260 68 ntBASIC1.7□□□□□ -2.14
PROM1O43490 MIR4305-201ENST00000583252 102 ntBASIC1.7□□□□□ -2.14
PROM1O43490 SNORA51.10-201ENST00000384418 136 ntBASIC1.69□□□□□ -2.14
PROM1O43490 MIR518E-201ENST00000385252 88 ntBASIC1.69□□□□□ -2.14
PROM1O43490 MIR759-201ENST00000390224 91 ntBASIC1.69□□□□□ -2.14
PROM1O43490 RNU6-321P-201ENST00000410912 106 ntBASIC1.69□□□□□ -2.14
PROM1O43490 BTF3P4-201ENST00000418852 495 ntBASIC1.69□□□□□ -2.14
PROM1O43490 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.69□□□□□ -2.14
PROM1O43490 COX6CP6-201ENST00000490840 228 ntBASIC1.69□□□□□ -2.14
PROM1O43490 MIR4791-201ENST00000607666 84 ntBASIC1.69□□□□□ -2.14
PROM1O43490 AC021613.1-201ENST00000623880 111 ntBASIC1.69□□□□□ -2.14
PROM1O43490 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.69□□□□□ -2.14
PROM1O43490 Y_RNA.213-201ENST00000364178 111 ntBASIC1.68□□□□□ -2.14
PROM1O43490 Y_RNA.298-201ENST00000364960 107 ntBASIC1.68□□□□□ -2.14
PROM1O43490 RNA5SP190-201ENST00000365222 118 ntBASIC1.68□□□□□ -2.14
PROM1O43490 MIR520C-201ENST00000385005 87 ntBASIC1.68□□□□□ -2.14
PROM1O43490 AL451046.2-201ENST00000403074 277 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms