Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 AC024995.1-201ENST00000523014 93 ntBASIC2.11□□□□□ -2.07
FOXN1O15353 AC084364.2-201ENST00000546924 395 ntBASIC2.11□□□□□ -2.07
FOXN1O15353 MIR6840-201ENST00000611937 71 ntBASIC2.11□□□□□ -2.07
FOXN1O15353 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC2.11□□□□□ -2.07
FOXN1O15353 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
FOXN1O15353 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
FOXN1O15353 SNORA7.1-201ENST00000363750 139 ntBASIC2.1□□□□□ -2.07
FOXN1O15353 Y_RNA.351-201ENST00000365436 96 ntBASIC2.1□□□□□ -2.07
FOXN1O15353 MIR548D2-201ENST00000384955 97 ntBASIC2.1□□□□□ -2.07
FOXN1O15353 RNA5SP61-201ENST00000516453 100 ntBASIC2.1□□□□□ -2.07
FOXN1O15353 AP003484.1-201ENST00000530974 250 ntBASIC2.1□□□□□ -2.07
FOXN1O15353 AC141557.1-201ENST00000540982 400 ntBASIC2.1□□□□□ -2.07
FOXN1O15353 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.1□□□□□ -2.07
FOXN1O15353 AL645939.4-201ENST00000604495 135 ntBASIC2.1□□□□□ -2.07
FOXN1O15353 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
FOXN1O15353 Y_RNA.78-201ENST00000362970 110 ntBASIC2.09□□□□□ -2.07
FOXN1O15353 Y_RNA.265-201ENST00000364677 108 ntBASIC2.09□□□□□ -2.07
FOXN1O15353 MIR515-2-201ENST00000384883 83 ntBASIC2.09□□□□□ -2.07
FOXN1O15353 MIR515-1-201ENST00000384884 83 ntBASIC2.09□□□□□ -2.07
FOXN1O15353 HMGN2P19-201ENST00000425149 265 ntBASIC2.09□□□□□ -2.07
FOXN1O15353 CST2P1-201ENST00000425770 87 ntBASIC2.09□□□□□ -2.07
FOXN1O15353 HMGN1P33-201ENST00000432945 451 ntBASIC2.09□□□□□ -2.07
FOXN1O15353 MTATP8P2-201ENST00000435212 202 ntBASIC2.09□□□□□ -2.07
FOXN1O15353 RNU6-904P-201ENST00000516206 101 ntBASIC2.09□□□□□ -2.07
FOXN1O15353 RNU2-35P-201ENST00000516446 142 ntBASIC2.09□□□□□ -2.07
FOXN1O15353 RNA5SP137-201ENST00000516833 135 ntBASIC2.09□□□□□ -2.07
FOXN1O15353 SNORA18.7-201ENST00000516910 131 ntBASIC2.09□□□□□ -2.07
FOXN1O15353 MIR4305-201ENST00000583252 102 ntBASIC2.09□□□□□ -2.07
FOXN1O15353 AC062037.1-201ENST00000605302 128 ntBASIC2.09□□□□□ -2.07
FOXN1O15353 AL442128.1-201ENST00000615151 90 ntBASIC2.09□□□□□ -2.07
FOXN1O15353 Y_RNA.818-201ENST00000618813 71 ntBASIC2.09□□□□□ -2.07
FOXN1O15353 AC015726.2-201ENST00000620112 122 ntBASIC2.09□□□□□ -2.07
FOXN1O15353 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.08
FOXN1O15353 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.08
FOXN1O15353 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.08□□□□□ -2.08
FOXN1O15353 RNU6-53P-201ENST00000365367 106 ntBASIC2.08□□□□□ -2.08
FOXN1O15353 RNU6-160P-201ENST00000384591 107 ntBASIC2.08□□□□□ -2.08
FOXN1O15353 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.08□□□□□ -2.08
FOXN1O15353 RN7SL274P-201ENST00000492268 272 ntBASIC2.08□□□□□ -2.08
FOXN1O15353 RNU6-1116P-201ENST00000517269 99 ntBASIC2.08□□□□□ -2.08
FOXN1O15353 AC091932.4-201ENST00000623386 200 ntBASIC2.08□□□□□ -2.08
FOXN1O15353 MIR342-201ENST00000362212 99 ntBASIC2.07□□□□□ -2.08
FOXN1O15353 RNA5SP493-201ENST00000364115 91 ntBASIC2.07□□□□□ -2.08
FOXN1O15353 Y_RNA.220-201ENST00000364244 109 ntBASIC2.07□□□□□ -2.08
FOXN1O15353 SNORA16.1-201ENST00000364597 132 ntBASIC2.07□□□□□ -2.08
FOXN1O15353 RNU4-16P-201ENST00000364737 141 ntBASIC2.07□□□□□ -2.08
FOXN1O15353 Y_RNA.336-201ENST00000365307 109 ntBASIC2.07□□□□□ -2.08
FOXN1O15353 RNA5SP109-201ENST00000391010 116 ntBASIC2.07□□□□□ -2.08
FOXN1O15353 RPS3AP1-201ENST00000413190 320 ntBASIC2.07□□□□□ -2.08
FOXN1O15353 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.07□□□□□ -2.08
FOXN1O15353 AC245047.3-201ENST00000429428 127 ntBASIC2.07□□□□□ -2.08
FOXN1O15353 RNU7-80P-201ENST00000459562 61 ntBASIC2.07□□□□□ -2.08
FOXN1O15353 MIR3163-201ENST00000581592 73 ntBASIC2.07□□□□□ -2.08
FOXN1O15353 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.07□□□□□ -2.08
FOXN1O15353 AC245884.12-201ENST00000615364 59 ntBASIC2.07□□□□□ -2.08
FOXN1O15353 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC2.07□□□□□ -2.08
FOXN1O15353 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
FOXN1O15353 SNORA63D-201ENST00000364359 132 ntBASIC2.06□□□□□ -2.08
FOXN1O15353 RNA5SP173-201ENST00000364857 136 ntBASIC2.06□□□□□ -2.08
FOXN1O15353 RNA5SP482-201ENST00000391269 118 ntBASIC2.06□□□□□ -2.08
FOXN1O15353 SNX2P2-201ENST00000424553 323 ntBASIC2.06□□□□□ -2.08
FOXN1O15353 RPL39P25-201ENST00000449384 154 ntBASIC2.06□□□□□ -2.08
FOXN1O15353 SNORA31.4-201ENST00000516049 129 ntBASIC2.06□□□□□ -2.08
FOXN1O15353 RNU7-6P-201ENST00000516845 62 ntBASIC2.06□□□□□ -2.08
FOXN1O15353 MIR3169-201ENST00000578032 83 ntBASIC2.06□□□□□ -2.08
FOXN1O15353 SNORD14A-201ENST00000606526 91 ntBASIC2.06□□□□□ -2.08
FOXN1O15353 AL157834.3-201ENST00000615543 103 ntBASIC2.06□□□□□ -2.08
FOXN1O15353 uc_338.20-201ENST00000621563 178 ntBASIC2.06□□□□□ -2.08
FOXN1O15353 AL162726.3-218ENST00000636401 95 ntBASIC2.06□□□□□ -2.08
FOXN1O15353 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
FOXN1O15353 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.05□□□□□ -2.08
FOXN1O15353 RNU1-42P-201ENST00000364033 160 ntBASIC2.05□□□□□ -2.08
FOXN1O15353 SNORD48-201ENST00000364953 64 ntBASIC2.05□□□□□ -2.08
FOXN1O15353 AC087499.4-201ENST00000448505 178 ntBASIC2.05□□□□□ -2.08
FOXN1O15353 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.05□□□□□ -2.08
FOXN1O15353 AC114811.1-201ENST00000507207 168 ntBASIC2.05□□□□□ -2.08
FOXN1O15353 RNU6-158P-201ENST00000517104 100 ntBASIC2.05□□□□□ -2.08
FOXN1O15353 MIR4419B-201ENST00000577260 68 ntBASIC2.05□□□□□ -2.08
FOXN1O15353 AC026271.5-201ENST00000577873 130 ntBASIC2.05□□□□□ -2.08
FOXN1O15353 SNORD115-40-201ENST00000606510 82 ntBASIC2.05□□□□□ -2.08
FOXN1O15353 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.05□□□□□ -2.08
FOXN1O15353 MALAT1.1-201ENST00000618249 95 ntBASIC2.05□□□□□ -2.08
FOXN1O15353 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
FOXN1O15353 MIR302B-201ENST00000362188 73 ntBASIC2.04□□□□□ -2.08
FOXN1O15353 Y_RNA.342-201ENST00000365352 113 ntBASIC2.04□□□□□ -2.08
FOXN1O15353 RNU6-573P-201ENST00000383938 106 ntBASIC2.04□□□□□ -2.08
FOXN1O15353 Y_RNA.454-201ENST00000384224 113 ntBASIC2.04□□□□□ -2.08
FOXN1O15353 Y_RNA.494-201ENST00000384432 111 ntBASIC2.04□□□□□ -2.08
FOXN1O15353 RNU6-816P-201ENST00000390914 107 ntBASIC2.04□□□□□ -2.08
FOXN1O15353 RNU6-1268P-201ENST00000391214 107 ntBASIC2.04□□□□□ -2.08
FOXN1O15353 RNU6-1239P-201ENST00000391310 107 ntBASIC2.04□□□□□ -2.08
FOXN1O15353 ATP6V0E1P1-201ENST00000412537 226 ntBASIC2.04□□□□□ -2.08
FOXN1O15353 AC107297.1-201ENST00000459991 176 ntBASIC2.04□□□□□ -2.08
FOXN1O15353 RNU6-1223P-201ENST00000517124 104 ntBASIC2.04□□□□□ -2.08
FOXN1O15353 MIR3126-201ENST00000577443 74 ntBASIC2.04□□□□□ -2.08
FOXN1O15353 MIR4778-201ENST00000577635 80 ntBASIC2.04□□□□□ -2.08
FOXN1O15353 AC022513.1-201ENST00000624512 117 ntBASIC2.04□□□□□ -2.08
FOXN1O15353 MIR2052-201ENST00000636055 55 ntBASIC2.04□□□□□ -2.08
FOXN1O15353 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
FOXN1O15353 Y_RNA.93-201ENST00000363066 109 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms