Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 Y_RNA.337-201ENST00000365312 102 ntBASIC0.97□□□□□ -2.25
CDX4O14627 Y_RNA.398-201ENST00000383952 99 ntBASIC0.97□□□□□ -2.25
CDX4O14627 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
CDX4O14627 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.97□□□□□ -2.25
CDX4O14627 RNU4-57P-201ENST00000515980 135 ntBASIC0.97□□□□□ -2.25
CDX4O14627 RNU7-40P-201ENST00000516397 64 ntBASIC0.97□□□□□ -2.25
CDX4O14627 MTND5P41-201ENST00000517498 206 ntBASIC0.97□□□□□ -2.25
CDX4O14627 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC0.96□□□□□ -2.26
CDX4O14627 Y_RNA.37-201ENST00000362606 108 ntBASIC0.96□□□□□ -2.26
CDX4O14627 SNORD115-28-201ENST00000363931 81 ntBASIC0.96□□□□□ -2.26
CDX4O14627 RNU6-1082P-201ENST00000364574 107 ntBASIC0.96□□□□□ -2.26
CDX4O14627 SNORD116-18-201ENST00000383961 92 ntBASIC0.96□□□□□ -2.26
CDX4O14627 Y_RNA.464-201ENST00000384282 110 ntBASIC0.96□□□□□ -2.26
CDX4O14627 Y_RNA.494-201ENST00000384432 111 ntBASIC0.96□□□□□ -2.26
CDX4O14627 MIR618-201ENST00000385287 98 ntBASIC0.96□□□□□ -2.26
CDX4O14627 SNORD28B-201ENST00000390993 75 ntBASIC0.96□□□□□ -2.26
CDX4O14627 SNORD77.3-201ENST00000391113 65 ntBASIC0.96□□□□□ -2.26
CDX4O14627 U8.17-201ENST00000391292 132 ntBASIC0.96□□□□□ -2.26
CDX4O14627 RNU6-588P-201ENST00000410281 105 ntBASIC0.96□□□□□ -2.26
CDX4O14627 RNU6-938P-201ENST00000411285 103 ntBASIC0.96□□□□□ -2.26
CDX4O14627 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.96□□□□□ -2.26
CDX4O14627 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.96□□□□□ -2.26
CDX4O14627 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.96□□□□□ -2.26
CDX4O14627 SNORD123-201ENST00000459473 70 ntBASIC0.96□□□□□ -2.26
CDX4O14627 SNORA31.4-201ENST00000516049 129 ntBASIC0.96□□□□□ -2.26
CDX4O14627 RNU6-830P-201ENST00000516353 107 ntBASIC0.96□□□□□ -2.26
CDX4O14627 SNORD36C-201ENST00000516733 66 ntBASIC0.96□□□□□ -2.26
CDX4O14627 MIR548AR-201ENST00000582191 57 ntBASIC0.96□□□□□ -2.26
CDX4O14627 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
CDX4O14627 MIR376A2-201ENST00000636782 80 ntBASIC0.96□□□□□ -2.26
CDX4O14627 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.96□□□□□ -2.26
CDX4O14627 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.96□□□□□ -2.26
CDX4O14627 Y_RNA.170-201ENST00000363746 110 ntBASIC0.95□□□□□ -2.26
CDX4O14627 RNY1P11-201ENST00000363759 113 ntBASIC0.95□□□□□ -2.26
CDX4O14627 RNU6-151P-201ENST00000364158 107 ntBASIC0.95□□□□□ -2.26
CDX4O14627 RNU6-449P-201ENST00000383914 107 ntBASIC0.95□□□□□ -2.26
CDX4O14627 MIR570-201ENST00000384917 97 ntBASIC0.95□□□□□ -2.26
CDX4O14627 SNORD41-201ENST00000386967 70 ntBASIC0.95□□□□□ -2.26
CDX4O14627 SNORA74.3-201ENST00000517108 154 ntBASIC0.95□□□□□ -2.26
CDX4O14627 DNAJC19P2-201ENST00000593340 302 ntBASIC0.95□□□□□ -2.26
CDX4O14627 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.95□□□□□ -2.26
CDX4O14627 MIR6844-201ENST00000637122 62 ntBASIC0.95□□□□□ -2.26
CDX4O14627 AL442644.1-201ENST00000454390 3105 ntBASIC0.95□□□□□ -2.26
CDX4O14627 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
CDX4O14627 SNORA25.7-201ENST00000364375 127 ntBASIC0.94□□□□□ -2.26
CDX4O14627 RNU4-11P-201ENST00000365287 132 ntBASIC0.94□□□□□ -2.26
CDX4O14627 RNU6-597P-201ENST00000365620 102 ntBASIC0.94□□□□□ -2.26
CDX4O14627 Y_RNA.580-201ENST00000391004 95 ntBASIC0.94□□□□□ -2.26
CDX4O14627 SNORD37.2-201ENST00000391075 66 ntBASIC0.94□□□□□ -2.26
CDX4O14627 AP003484.1-201ENST00000530974 250 ntBASIC0.94□□□□□ -2.26
CDX4O14627 AL365205.2-201ENST00000594586 68 ntBASIC0.94□□□□□ -2.26
CDX4O14627 AC134878.1-201ENST00000619901 243 ntBASIC0.94□□□□□ -2.26
CDX4O14627 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
CDX4O14627 RNU6-774P-201ENST00000363238 107 ntBASIC0.93□□□□□ -2.26
CDX4O14627 Y_RNA.241-201ENST00000364470 117 ntBASIC0.93□□□□□ -2.26
CDX4O14627 Y_RNA.370-201ENST00000365589 108 ntBASIC0.93□□□□□ -2.26
CDX4O14627 RNU6-1062P-201ENST00000383908 107 ntBASIC0.93□□□□□ -2.26
CDX4O14627 RNU6-1054P-201ENST00000411293 104 ntBASIC0.93□□□□□ -2.26
CDX4O14627 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.93□□□□□ -2.26
CDX4O14627 RNU6-947P-201ENST00000516264 106 ntBASIC0.93□□□□□ -2.26
CDX4O14627 RNU6-346P-201ENST00000516288 111 ntBASIC0.93□□□□□ -2.26
CDX4O14627 SNORA18.4-201ENST00000516440 124 ntBASIC0.93□□□□□ -2.26
CDX4O14627 RNU6-1212P-201ENST00000517023 104 ntBASIC0.93□□□□□ -2.26
CDX4O14627 RNU6-165P-201ENST00000517170 99 ntBASIC0.93□□□□□ -2.26
CDX4O14627 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.93□□□□□ -2.26
CDX4O14627 Y_RNA.778-201ENST00000620203 90 ntBASIC0.93□□□□□ -2.26
CDX4O14627 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.93□□□□□ -2.26
CDX4O14627 RNU6-1292P-201ENST00000383856 107 ntBASIC0.92□□□□□ -2.26
CDX4O14627 RNU6-1189P-201ENST00000383958 107 ntBASIC0.92□□□□□ -2.26
CDX4O14627 SNORA25-201ENST00000384384 134 ntBASIC0.92□□□□□ -2.26
CDX4O14627 Y_RNA.542-201ENST00000384641 111 ntBASIC0.92□□□□□ -2.26
CDX4O14627 MIR520C-201ENST00000385005 87 ntBASIC0.92□□□□□ -2.26
CDX4O14627 RNA5SP127-201ENST00000411051 133 ntBASIC0.92□□□□□ -2.26
CDX4O14627 AC087499.4-201ENST00000448505 178 ntBASIC0.92□□□□□ -2.26
CDX4O14627 OR2A41P-201ENST00000473586 105 ntBASIC0.92□□□□□ -2.26
CDX4O14627 RPS26P48-201ENST00000491713 339 ntBASIC0.92□□□□□ -2.26
CDX4O14627 RNU7-41P-201ENST00000515917 61 ntBASIC0.92□□□□□ -2.26
CDX4O14627 SNORA31.2-201ENST00000516019 134 ntBASIC0.92□□□□□ -2.26
CDX4O14627 RNU7-200P-201ENST00000516105 62 ntBASIC0.92□□□□□ -2.26
CDX4O14627 SNORD111.1-201ENST00000516421 86 ntBASIC0.92□□□□□ -2.26
CDX4O14627 SNORA70.22-201ENST00000517160 124 ntBASIC0.92□□□□□ -2.26
CDX4O14627 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.92□□□□□ -2.26
CDX4O14627 MIR4698-201ENST00000577795 80 ntBASIC0.92□□□□□ -2.26
CDX4O14627 MIR4764-201ENST00000580680 88 ntBASIC0.92□□□□□ -2.26
CDX4O14627 MIR4714-201ENST00000580728 77 ntBASIC0.92□□□□□ -2.26
CDX4O14627 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.92□□□□□ -2.26
CDX4O14627 AC008133.2-201ENST00000624540 351 ntBASIC0.92□□□□□ -2.26
CDX4O14627 MIR342-201ENST00000362212 99 ntBASIC0.91□□□□□ -2.26
CDX4O14627 Y_RNA.410-201ENST00000383992 113 ntBASIC0.91□□□□□ -2.26
CDX4O14627 Y_RNA.506-201ENST00000384494 102 ntBASIC0.91□□□□□ -2.26
CDX4O14627 MIR193B-201ENST00000384907 83 ntBASIC0.91□□□□□ -2.26
CDX4O14627 MIR624-201ENST00000385217 97 ntBASIC0.91□□□□□ -2.26
CDX4O14627 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
CDX4O14627 SNORA75.5-201ENST00000391291 81 ntBASIC0.91□□□□□ -2.26
CDX4O14627 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.91□□□□□ -2.26
CDX4O14627 AC245047.7-201ENST00000440265 293 ntBASIC0.91□□□□□ -2.26
CDX4O14627 RNA5SP272-201ENST00000516095 111 ntBASIC0.91□□□□□ -2.26
CDX4O14627 RNA5SP404-201ENST00000517118 132 ntBASIC0.91□□□□□ -2.26
CDX4O14627 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.91□□□□□ -2.26
CDX4O14627 AC112693.2-201ENST00000556538 232 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 172.7 ms