Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 RNA5SP153-201ENST00000516498 76 ntBASIC0.78□□□□□ -2.28
CLDN4O14493 RNU7-53P-201ENST00000516705 60 ntBASIC0.78□□□□□ -2.28
CLDN4O14493 MIR4643-201ENST00000577473 78 ntBASIC0.78□□□□□ -2.28
CLDN4O14493 AC025627.3-201ENST00000582078 182 ntBASIC0.78□□□□□ -2.28
CLDN4O14493 MIR4653-201ENST00000585107 83 ntBASIC0.78□□□□□ -2.28
CLDN4O14493 AC013244.2-201ENST00000603396 103 ntBASIC0.78□□□□□ -2.28
CLDN4O14493 FAM71BP1-201ENST00000604431 523 ntBASIC0.78□□□□□ -2.28
CLDN4O14493 AL353765.1-201ENST00000605514 183 ntBASIC0.78□□□□□ -2.28
CLDN4O14493 RNU6-653P-201ENST00000363074 106 ntBASIC0.77□□□□□ -2.29
CLDN4O14493 Y_RNA.262-201ENST00000364641 102 ntBASIC0.77□□□□□ -2.29
CLDN4O14493 Y_RNA.288-201ENST00000364854 92 ntBASIC0.77□□□□□ -2.29
CLDN4O14493 MIR193B-201ENST00000384907 83 ntBASIC0.77□□□□□ -2.29
CLDN4O14493 RNU6-913P-201ENST00000390913 95 ntBASIC0.77□□□□□ -2.29
CLDN4O14493 MIR1827-201ENST00000408549 66 ntBASIC0.77□□□□□ -2.29
CLDN4O14493 SNORD99-201ENST00000408612 74 ntBASIC0.77□□□□□ -2.29
CLDN4O14493 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.77□□□□□ -2.29
CLDN4O14493 RNU7-73P-201ENST00000458743 63 ntBASIC0.77□□□□□ -2.29
CLDN4O14493 RNU6-351P-201ENST00000516097 100 ntBASIC0.77□□□□□ -2.29
CLDN4O14493 MIR4264-201ENST00000583520 66 ntBASIC0.77□□□□□ -2.29
CLDN4O14493 MIR6866-201ENST00000638146 69 ntBASIC0.77□□□□□ -2.29
CLDN4O14493 MIR1-1-201ENST00000362147 71 ntBASIC0.76□□□□□ -2.29
CLDN4O14493 MIR100-201ENST00000385259 80 ntBASIC0.76□□□□□ -2.29
CLDN4O14493 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.76□□□□□ -2.29
CLDN4O14493 AL138752.1-201ENST00000452964 351 ntBASIC0.76□□□□□ -2.29
CLDN4O14493 SNORD127-201ENST00000458892 86 ntBASIC0.76□□□□□ -2.29
CLDN4O14493 AC113410.1-201ENST00000505029 247 ntBASIC0.76□□□□□ -2.29
CLDN4O14493 RNU6-327P-201ENST00000516270 127 ntBASIC0.76□□□□□ -2.29
CLDN4O14493 MIR1273G-201ENST00000577677 100 ntBASIC0.76□□□□□ -2.29
CLDN4O14493 AC097639.2-201ENST00000603159 172 ntBASIC0.76□□□□□ -2.29
CLDN4O14493 AL442067.1-201ENST00000613261 223 ntBASIC0.76□□□□□ -2.29
CLDN4O14493 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
CLDN4O14493 HSBP1P2-201ENST00000299671 229 ntBASIC0.75□□□□□ -2.29
CLDN4O14493 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
CLDN4O14493 Y_RNA.76-201ENST00000362931 109 ntBASIC0.75□□□□□ -2.29
CLDN4O14493 RNU6-580P-201ENST00000365159 107 ntBASIC0.75□□□□□ -2.29
CLDN4O14493 Y_RNA.410-201ENST00000383992 113 ntBASIC0.75□□□□□ -2.29
CLDN4O14493 MIR548H3-201ENST00000408771 118 ntBASIC0.75□□□□□ -2.29
CLDN4O14493 HMGN1P33-201ENST00000432945 451 ntBASIC0.75□□□□□ -2.29
CLDN4O14493 snoU13.21-201ENST00000459368 105 ntBASIC0.75□□□□□ -2.29
CLDN4O14493 AL590095.2-201ENST00000604136 117 ntBASIC0.75□□□□□ -2.29
CLDN4O14493 AC108706.1-201ENST00000611053 297 ntBASIC0.75□□□□□ -2.29
CLDN4O14493 Y_RNA.292-201ENST00000364904 97 ntBASIC0.74□□□□□ -2.29
CLDN4O14493 RNU6-1189P-201ENST00000383958 107 ntBASIC0.74□□□□□ -2.29
CLDN4O14493 RPS26P5-201ENST00000418544 335 ntBASIC0.74□□□□□ -2.29
CLDN4O14493 MTND2P23-201ENST00000422990 651 ntBASIC0.74□□□□□ -2.29
CLDN4O14493 AC004941.2-201ENST00000427009 228 ntBASIC0.74□□□□□ -2.29
CLDN4O14493 RNU7-96P-201ENST00000459535 64 ntBASIC0.74□□□□□ -2.29
CLDN4O14493 RNU6-561P-201ENST00000516222 102 ntBASIC0.74□□□□□ -2.29
CLDN4O14493 MIR4714-201ENST00000580728 77 ntBASIC0.74□□□□□ -2.29
CLDN4O14493 AC104465.1-201ENST00000611365 139 ntBASIC0.74□□□□□ -2.29
CLDN4O14493 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
CLDN4O14493 MIR342-201ENST00000362212 99 ntBASIC0.73□□□□□ -2.29
CLDN4O14493 Y_RNA.7-201ENST00000362352 102 ntBASIC0.73□□□□□ -2.29
CLDN4O14493 Y_RNA.23-201ENST00000362496 106 ntBASIC0.73□□□□□ -2.29
CLDN4O14493 RNU6-728P-201ENST00000365375 104 ntBASIC0.73□□□□□ -2.29
CLDN4O14493 SNORA1-201ENST00000384107 130 ntBASIC0.73□□□□□ -2.29
CLDN4O14493 SNORD38B-201ENST00000384690 67 ntBASIC0.73□□□□□ -2.29
CLDN4O14493 SNORA79-201ENST00000408376 140 ntBASIC0.73□□□□□ -2.29
CLDN4O14493 SNORD83.1-201ENST00000411362 77 ntBASIC0.73□□□□□ -2.29
CLDN4O14493 AC006461.1-201ENST00000412637 326 ntBASIC0.73□□□□□ -2.29
CLDN4O14493 AC244023.1-201ENST00000426884 112 ntBASIC0.73□□□□□ -2.29
CLDN4O14493 MTCYBP9-201ENST00000431021 303 ntBASIC0.73□□□□□ -2.29
CLDN4O14493 RNU7-62P-201ENST00000458856 62 ntBASIC0.73□□□□□ -2.29
CLDN4O14493 RNU2-11P-201ENST00000459191 187 ntBASIC0.73□□□□□ -2.29
CLDN4O14493 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.73□□□□□ -2.29
CLDN4O14493 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.73□□□□□ -2.29
CLDN4O14493 AC242498.1-201ENST00000604134 111 ntBASIC0.73□□□□□ -2.29
CLDN4O14493 AC011921.3-201ENST00000605540 361 ntBASIC0.73□□□□□ -2.29
CLDN4O14493 MIR6513-201ENST00000621188 64 ntBASIC0.73□□□□□ -2.29
CLDN4O14493 SNORD38B-202ENST00000625943 69 ntBASIC0.73□□□□□ -2.29
CLDN4O14493 Z97988.1-201ENST00000637697 135 ntBASIC0.73□□□□□ -2.29
CLDN4O14493 Y_RNA.30-201ENST00000362572 97 ntBASIC0.72□□□□□ -2.29
CLDN4O14493 RNA5SP457-201ENST00000363657 124 ntBASIC0.72□□□□□ -2.29
CLDN4O14493 RNU6-103P-201ENST00000363686 107 ntBASIC0.72□□□□□ -2.29
CLDN4O14493 SNORD27-201ENST00000363981 72 ntBASIC0.72□□□□□ -2.29
CLDN4O14493 SNORA1.1-201ENST00000364671 133 ntBASIC0.72□□□□□ -2.29
CLDN4O14493 RNU6-934P-201ENST00000365154 107 ntBASIC0.72□□□□□ -2.29
CLDN4O14493 Y_RNA.440-201ENST00000384120 114 ntBASIC0.72□□□□□ -2.29
CLDN4O14493 SNORD105-201ENST00000386910 85 ntBASIC0.72□□□□□ -2.29
CLDN4O14493 MIR548I3-201ENST00000408378 149 ntBASIC0.72□□□□□ -2.29
CLDN4O14493 RNU6-998P-201ENST00000515894 101 ntBASIC0.72□□□□□ -2.29
CLDN4O14493 MIR8055-201ENST00000610739 97 ntBASIC0.72□□□□□ -2.29
CLDN4O14493 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.72□□□□□ -2.29
CLDN4O14493 Y_RNA.133-201ENST00000363428 110 ntBASIC0.71□□□□□ -2.3
CLDN4O14493 Y_RNA.562-201ENST00000384695 113 ntBASIC0.71□□□□□ -2.3
CLDN4O14493 SNORD77.3-201ENST00000391113 65 ntBASIC0.71□□□□□ -2.3
CLDN4O14493 MIR1302-3-201ENST00000408128 138 ntBASIC0.71□□□□□ -2.3
CLDN4O14493 RNU6-1190P-201ENST00000410811 104 ntBASIC0.71□□□□□ -2.3
CLDN4O14493 AC015818.7-201ENST00000428754 109 ntBASIC0.71□□□□□ -2.3
CLDN4O14493 AC087499.7-201ENST00000441958 109 ntBASIC0.71□□□□□ -2.3
CLDN4O14493 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.71□□□□□ -2.3
CLDN4O14493 RNY3P16-201ENST00000516338 101 ntBASIC0.71□□□□□ -2.3
CLDN4O14493 SCARNA15.1-201ENST00000516384 125 ntBASIC0.71□□□□□ -2.3
CLDN4O14493 AC133485.1-201ENST00000567176 124 ntBASIC0.71□□□□□ -2.3
CLDN4O14493 AC138907.6-201ENST00000568401 126 ntBASIC0.71□□□□□ -2.3
CLDN4O14493 MIR4771-2-201ENST00000577758 74 ntBASIC0.71□□□□□ -2.3
CLDN4O14493 MIR3129-201ENST00000581095 76 ntBASIC0.71□□□□□ -2.3
CLDN4O14493 MIR4771-1-201ENST00000582617 74 ntBASIC0.71□□□□□ -2.3
CLDN4O14493 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.7□□□□□ -2.3
CLDN4O14493 RNU6-369P-201ENST00000362515 102 ntBASIC0.7□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 260.5 ms