Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 snoU13.2-201ENST00000459201 104 ntBASIC0.41□□□□□ -2.34
SLC28A1O00337 MTATP8P1-201ENST00000467115 207 ntBASIC0.41□□□□□ -2.34
SLC28A1O00337 MIR5087-201ENST00000635826 76 ntBASIC0.41□□□□□ -2.34
SLC28A1O00337 RNU6-639P-201ENST00000384074 107 ntBASIC0.4□□□□□ -2.35
SLC28A1O00337 MT-TW-201ENST00000387382 68 ntBASIC0.4□□□□□ -2.35
SLC28A1O00337 RNU6-1109P-201ENST00000391187 107 ntBASIC0.4□□□□□ -2.35
SLC28A1O00337 Y_RNA.622-201ENST00000411091 108 ntBASIC0.4□□□□□ -2.35
SLC28A1O00337 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.4□□□□□ -2.35
SLC28A1O00337 SNRPGP8-201ENST00000454064 226 ntBASIC0.4□□□□□ -2.35
SLC28A1O00337 TRBVB-201ENST00000477100 408 ntBASIC0.4□□□□□ -2.35
SLC28A1O00337 RNU6-229P-201ENST00000516614 102 ntBASIC0.4□□□□□ -2.35
SLC28A1O00337 RNU6-1223P-201ENST00000517124 104 ntBASIC0.4□□□□□ -2.35
SLC28A1O00337 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.4□□□□□ -2.35
SLC28A1O00337 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC0.4□□□□□ -2.35
SLC28A1O00337 AC008608.1-201ENST00000603910 127 ntBASIC0.4□□□□□ -2.35
SLC28A1O00337 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.4□□□□□ -2.35
SLC28A1O00337 Y_RNA.23-201ENST00000362496 106 ntBASIC0.39□□□□□ -2.35
SLC28A1O00337 SNORA1-201ENST00000384107 130 ntBASIC0.39□□□□□ -2.35
SLC28A1O00337 Y_RNA.440-201ENST00000384120 114 ntBASIC0.39□□□□□ -2.35
SLC28A1O00337 Y_RNA.483-201ENST00000384380 101 ntBASIC0.39□□□□□ -2.35
SLC28A1O00337 RNU6-342P-201ENST00000384521 104 ntBASIC0.39□□□□□ -2.35
SLC28A1O00337 RNU6-713P-201ENST00000384761 107 ntBASIC0.39□□□□□ -2.35
SLC28A1O00337 MIR125B2-201ENST00000385128 89 ntBASIC0.39□□□□□ -2.35
SLC28A1O00337 RNU6-1319P-201ENST00000390855 104 ntBASIC0.39□□□□□ -2.35
SLC28A1O00337 RNU6-747P-201ENST00000390928 104 ntBASIC0.39□□□□□ -2.35
SLC28A1O00337 RNU6-241P-201ENST00000391148 104 ntBASIC0.39□□□□□ -2.35
SLC28A1O00337 RNU6-447P-201ENST00000410293 104 ntBASIC0.39□□□□□ -2.35
SLC28A1O00337 RNU6-1118P-201ENST00000410382 104 ntBASIC0.39□□□□□ -2.35
SLC28A1O00337 RNU6-1076P-201ENST00000410397 104 ntBASIC0.39□□□□□ -2.35
SLC28A1O00337 RNU6-355P-201ENST00000410427 104 ntBASIC0.39□□□□□ -2.35
SLC28A1O00337 RNU6-791P-201ENST00000410467 104 ntBASIC0.39□□□□□ -2.35
SLC28A1O00337 RNU6-705P-201ENST00000410601 104 ntBASIC0.39□□□□□ -2.35
SLC28A1O00337 RNU6-1100P-201ENST00000410691 104 ntBASIC0.39□□□□□ -2.35
SLC28A1O00337 RNU6-860P-201ENST00000410860 104 ntBASIC0.39□□□□□ -2.35
SLC28A1O00337 RNU6-1217P-201ENST00000411276 104 ntBASIC0.39□□□□□ -2.35
SLC28A1O00337 RNU6-785P-201ENST00000411324 104 ntBASIC0.39□□□□□ -2.35
SLC28A1O00337 RNU7-185P-201ENST00000459215 60 ntBASIC0.39□□□□□ -2.35
SLC28A1O00337 SNORA68.3-201ENST00000515906 83 ntBASIC0.39□□□□□ -2.35
SLC28A1O00337 RNU6-561P-201ENST00000516222 102 ntBASIC0.39□□□□□ -2.35
SLC28A1O00337 AC097639.2-201ENST00000603159 172 ntBASIC0.39□□□□□ -2.35
SLC28A1O00337 U6.90-201ENST00000614007 104 ntBASIC0.39□□□□□ -2.35
SLC28A1O00337 U6.70-201ENST00000620287 104 ntBASIC0.39□□□□□ -2.35
SLC28A1O00337 MIR302B-201ENST00000362188 73 ntBASIC0.38□□□□□ -2.35
SLC28A1O00337 MIR342-201ENST00000362212 99 ntBASIC0.38□□□□□ -2.35
SLC28A1O00337 RNU6-597P-201ENST00000365620 102 ntBASIC0.38□□□□□ -2.35
SLC28A1O00337 SNORA50A-201ENST00000384225 134 ntBASIC0.38□□□□□ -2.35
SLC28A1O00337 SNORD12C-201ENST00000386307 89 ntBASIC0.38□□□□□ -2.35
SLC28A1O00337 MT-TF-201ENST00000387314 71 ntBASIC0.38□□□□□ -2.35
SLC28A1O00337 RNU7-102P-201ENST00000458948 62 ntBASIC0.38□□□□□ -2.35
SLC28A1O00337 RNU7-45P-201ENST00000459460 63 ntBASIC0.38□□□□□ -2.35
SLC28A1O00337 MIR4643-201ENST00000577473 78 ntBASIC0.38□□□□□ -2.35
SLC28A1O00337 AC090897.1-201ENST00000580909 226 ntBASIC0.38□□□□□ -2.35
SLC28A1O00337 U2.14-201ENST00000615943 113 ntBASIC0.38□□□□□ -2.35
SLC28A1O00337 Y_RNA.82-201ENST00000363000 102 ntBASIC0.37□□□□□ -2.35
SLC28A1O00337 Y_RNA.92-201ENST00000363043 102 ntBASIC0.37□□□□□ -2.35
SLC28A1O00337 Y_RNA.199-201ENST00000364014 102 ntBASIC0.37□□□□□ -2.35
SLC28A1O00337 Y_RNA.235-201ENST00000364412 102 ntBASIC0.37□□□□□ -2.35
SLC28A1O00337 Y_RNA.304-201ENST00000365011 112 ntBASIC0.37□□□□□ -2.35
SLC28A1O00337 Y_RNA.306-201ENST00000365015 102 ntBASIC0.37□□□□□ -2.35
SLC28A1O00337 Y_RNA.312-201ENST00000365089 102 ntBASIC0.37□□□□□ -2.35
SLC28A1O00337 Y_RNA.322-201ENST00000365151 102 ntBASIC0.37□□□□□ -2.35
SLC28A1O00337 Y_RNA.354-201ENST00000365448 111 ntBASIC0.37□□□□□ -2.35
SLC28A1O00337 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.37□□□□□ -2.35
SLC28A1O00337 RNU6-1227P-201ENST00000383981 107 ntBASIC0.37□□□□□ -2.35
SLC28A1O00337 RNU6-472P-201ENST00000384299 107 ntBASIC0.37□□□□□ -2.35
SLC28A1O00337 MIR563-201ENST00000385080 79 ntBASIC0.37□□□□□ -2.35
SLC28A1O00337 MIR616-201ENST00000385293 97 ntBASIC0.37□□□□□ -2.35
SLC28A1O00337 SNORA26.6-201ENST00000391256 115 ntBASIC0.37□□□□□ -2.35
SLC28A1O00337 AL606845.1-201ENST00000404881 255 ntBASIC0.37□□□□□ -2.35
SLC28A1O00337 SNORD100-201ENST00000408573 76 ntBASIC0.37□□□□□ -2.35
SLC28A1O00337 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.37□□□□□ -2.35
SLC28A1O00337 Y_RNA.650-201ENST00000459002 102 ntBASIC0.37□□□□□ -2.35
SLC28A1O00337 RNA5SP220-201ENST00000516298 104 ntBASIC0.37□□□□□ -2.35
SLC28A1O00337 Y_RNA.777-201ENST00000516982 102 ntBASIC0.37□□□□□ -2.35
SLC28A1O00337 AL442663.2-201ENST00000554385 511 ntBASIC0.37□□□□□ -2.35
SLC28A1O00337 Y_RNA.771-201ENST00000598668 102 ntBASIC0.37□□□□□ -2.35
SLC28A1O00337 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.37□□□□□ -2.35
SLC28A1O00337 AC092634.7-201ENST00000621022 103 ntBASIC0.37□□□□□ -2.35
SLC28A1O00337 Y_RNA.789-201ENST00000622480 102 ntBASIC0.37□□□□□ -2.35
SLC28A1O00337 RNU6-381P-201ENST00000391259 108 ntBASIC0.36□□□□□ -2.35
SLC28A1O00337 Y_RNA.590-201ENST00000410140 107 ntBASIC0.36□□□□□ -2.35
SLC28A1O00337 RNA5SP261-201ENST00000410536 106 ntBASIC0.36□□□□□ -2.35
SLC28A1O00337 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.36□□□□□ -2.35
SLC28A1O00337 AC098934.3-201ENST00000430450 190 ntBASIC0.36□□□□□ -2.35
SLC28A1O00337 RNU6-635P-201ENST00000516651 102 ntBASIC0.36□□□□□ -2.35
SLC28A1O00337 RNU7-156P-201ENST00000517214 74 ntBASIC0.36□□□□□ -2.35
SLC28A1O00337 AP003072.1-201ENST00000531740 145 ntBASIC0.36□□□□□ -2.35
SLC28A1O00337 MIR4282-201ENST00000583613 67 ntBASIC0.36□□□□□ -2.35
SLC28A1O00337 SNORD92-201ENST00000585078 85 ntBASIC0.36□□□□□ -2.35
SLC28A1O00337 AC044792.1-201ENST00000593294 196 ntBASIC0.36□□□□□ -2.35
SLC28A1O00337 MIRLET7D-201ENST00000362263 87 ntBASIC0.35□□□□□ -2.35
SLC28A1O00337 MIR30D-201ENST00000362283 70 ntBASIC0.35□□□□□ -2.35
SLC28A1O00337 RNU6-653P-201ENST00000363074 106 ntBASIC0.35□□□□□ -2.35
SLC28A1O00337 Y_RNA.122-201ENST00000363331 96 ntBASIC0.35□□□□□ -2.35
SLC28A1O00337 Y_RNA.416-201ENST00000384014 113 ntBASIC0.35□□□□□ -2.35
SLC28A1O00337 RNU6-679P-201ENST00000391003 106 ntBASIC0.35□□□□□ -2.35
SLC28A1O00337 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.35□□□□□ -2.35
SLC28A1O00337 RNA5SP247-201ENST00000411181 105 ntBASIC0.35□□□□□ -2.35
SLC28A1O00337 Y_RNA.676-201ENST00000516393 96 ntBASIC0.35□□□□□ -2.35
SLC28A1O00337 Y_RNA.679-201ENST00000516416 91 ntBASIC0.35□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 520.1 ms