Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 Y_RNA.92-201ENST00000363043 102 ntBASIC0.51□□□□□ -2.33
PDLIM1O00151 Y_RNA.235-201ENST00000364412 102 ntBASIC0.51□□□□□ -2.33
PDLIM1O00151 Y_RNA.306-201ENST00000365015 102 ntBASIC0.51□□□□□ -2.33
PDLIM1O00151 Y_RNA.312-201ENST00000365089 102 ntBASIC0.51□□□□□ -2.33
PDLIM1O00151 Y_RNA.322-201ENST00000365151 102 ntBASIC0.51□□□□□ -2.33
PDLIM1O00151 RNU6-484P-201ENST00000384016 107 ntBASIC0.51□□□□□ -2.33
PDLIM1O00151 Y_RNA.461-201ENST00000384263 103 ntBASIC0.51□□□□□ -2.33
PDLIM1O00151 MIR616-201ENST00000385293 97 ntBASIC0.51□□□□□ -2.33
PDLIM1O00151 SNORD2.1-201ENST00000458762 69 ntBASIC0.51□□□□□ -2.33
PDLIM1O00151 Y_RNA.650-201ENST00000459002 102 ntBASIC0.51□□□□□ -2.33
PDLIM1O00151 RNU7-96P-201ENST00000459535 64 ntBASIC0.51□□□□□ -2.33
PDLIM1O00151 Y_RNA.777-201ENST00000516982 102 ntBASIC0.51□□□□□ -2.33
PDLIM1O00151 Y_RNA.771-201ENST00000598668 102 ntBASIC0.51□□□□□ -2.33
PDLIM1O00151 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.51□□□□□ -2.33
PDLIM1O00151 MIR8062-201ENST00000621515 85 ntBASIC0.51□□□□□ -2.33
PDLIM1O00151 Y_RNA.789-201ENST00000622480 102 ntBASIC0.51□□□□□ -2.33
PDLIM1O00151 MIR335-201ENST00000362173 94 ntBASIC0.5□□□□□ -2.33
PDLIM1O00151 RNA5SP499-201ENST00000363982 119 ntBASIC0.5□□□□□ -2.33
PDLIM1O00151 snoU2_19.4-201ENST00000364329 80 ntBASIC0.5□□□□□ -2.33
PDLIM1O00151 MIR588-201ENST00000384900 83 ntBASIC0.5□□□□□ -2.33
PDLIM1O00151 RNU6-1228P-201ENST00000391014 107 ntBASIC0.5□□□□□ -2.33
PDLIM1O00151 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.5□□□□□ -2.33
PDLIM1O00151 AC018659.1-201ENST00000551083 169 ntBASIC0.5□□□□□ -2.33
PDLIM1O00151 MIR4676-201ENST00000583078 72 ntBASIC0.5□□□□□ -2.33
PDLIM1O00151 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.5□□□□□ -2.33
PDLIM1O00151 AL365265.1-201ENST00000621045 234 ntBASIC0.5□□□□□ -2.33
PDLIM1O00151 AC010332.2-201ENST00000613083 1904 ntBASIC0.5□□□□□ -2.33
PDLIM1O00151 Y_RNA.304-201ENST00000365011 112 ntBASIC0.49□□□□□ -2.33
PDLIM1O00151 Y_RNA.416-201ENST00000384014 113 ntBASIC0.49□□□□□ -2.33
PDLIM1O00151 Y_RNA.483-201ENST00000384380 101 ntBASIC0.49□□□□□ -2.33
PDLIM1O00151 MT-TW-201ENST00000387382 68 ntBASIC0.49□□□□□ -2.33
PDLIM1O00151 SNORA79-201ENST00000408376 140 ntBASIC0.49□□□□□ -2.33
PDLIM1O00151 MIR548I3-201ENST00000408378 149 ntBASIC0.49□□□□□ -2.33
PDLIM1O00151 AC092628.1-201ENST00000436250 252 ntBASIC0.49□□□□□ -2.33
PDLIM1O00151 snoU13.18-201ENST00000459483 104 ntBASIC0.49□□□□□ -2.33
PDLIM1O00151 RNU6-998P-201ENST00000515894 101 ntBASIC0.49□□□□□ -2.33
PDLIM1O00151 AL442663.2-201ENST00000554385 511 ntBASIC0.49□□□□□ -2.33
PDLIM1O00151 MIR4804-201ENST00000581683 73 ntBASIC0.49□□□□□ -2.33
PDLIM1O00151 AC020891.4-201ENST00000605745 93 ntBASIC0.49□□□□□ -2.33
PDLIM1O00151 MIR6740-201ENST00000618268 113 ntBASIC0.49□□□□□ -2.33
PDLIM1O00151 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.49□□□□□ -2.33
PDLIM1O00151 Y_RNA.54-201ENST00000362766 105 ntBASIC0.48□□□□□ -2.33
PDLIM1O00151 Y_RNA.176-201ENST00000363815 109 ntBASIC0.48□□□□□ -2.33
PDLIM1O00151 Y_RNA.351-201ENST00000365436 96 ntBASIC0.48□□□□□ -2.33
PDLIM1O00151 Y_RNA.440-201ENST00000384120 114 ntBASIC0.48□□□□□ -2.33
PDLIM1O00151 RNU6-1160P-201ENST00000384546 104 ntBASIC0.48□□□□□ -2.33
PDLIM1O00151 Y_RNA.574-201ENST00000384766 95 ntBASIC0.48□□□□□ -2.33
PDLIM1O00151 MIR573-201ENST00000384964 99 ntBASIC0.48□□□□□ -2.33
PDLIM1O00151 RNU6-1165P-201ENST00000410119 107 ntBASIC0.48□□□□□ -2.33
PDLIM1O00151 RNU6-602P-201ENST00000411155 105 ntBASIC0.48□□□□□ -2.33
PDLIM1O00151 MIR18B-201ENST00000454574 71 ntBASIC0.48□□□□□ -2.33
PDLIM1O00151 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.48□□□□□ -2.33
PDLIM1O00151 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.48□□□□□ -2.33
PDLIM1O00151 MIR6513-201ENST00000621188 64 ntBASIC0.48□□□□□ -2.33
PDLIM1O00151 SNORA63-201ENST00000363450 132 ntBASIC0.47□□□□□ -2.33
PDLIM1O00151 RNU6-945P-201ENST00000383947 107 ntBASIC0.47□□□□□ -2.33
PDLIM1O00151 SNORA1-201ENST00000384107 130 ntBASIC0.47□□□□□ -2.33
PDLIM1O00151 RNU6-364P-201ENST00000384387 107 ntBASIC0.47□□□□□ -2.33
PDLIM1O00151 MIR938-201ENST00000401216 83 ntBASIC0.47□□□□□ -2.33
PDLIM1O00151 RNU6-1190P-201ENST00000410811 104 ntBASIC0.47□□□□□ -2.33
PDLIM1O00151 snoU13.2-201ENST00000459201 104 ntBASIC0.47□□□□□ -2.33
PDLIM1O00151 RNA5SP436-201ENST00000516020 115 ntBASIC0.47□□□□□ -2.33
PDLIM1O00151 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
PDLIM1O00151 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.47□□□□□ -2.33
PDLIM1O00151 uc_338.6-201ENST00000613544 171 ntBASIC0.47□□□□□ -2.33
PDLIM1O00151 RNA5SP347-201ENST00000362445 119 ntBASIC0.46□□□□□ -2.34
PDLIM1O00151 Y_RNA.23-201ENST00000362496 106 ntBASIC0.46□□□□□ -2.34
PDLIM1O00151 Y_RNA.262-201ENST00000364641 102 ntBASIC0.46□□□□□ -2.34
PDLIM1O00151 RNU6-728P-201ENST00000365375 104 ntBASIC0.46□□□□□ -2.34
PDLIM1O00151 MIR606-201ENST00000384851 96 ntBASIC0.46□□□□□ -2.34
PDLIM1O00151 SNORD12C-201ENST00000386307 89 ntBASIC0.46□□□□□ -2.34
PDLIM1O00151 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
PDLIM1O00151 RNU7-56P-201ENST00000458744 62 ntBASIC0.46□□□□□ -2.34
PDLIM1O00151 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.46□□□□□ -2.34
PDLIM1O00151 MIR3129-201ENST00000581095 76 ntBASIC0.46□□□□□ -2.34
PDLIM1O00151 MIR4282-201ENST00000583613 67 ntBASIC0.46□□□□□ -2.34
PDLIM1O00151 AC008737.2-201ENST00000599446 118 ntBASIC0.46□□□□□ -2.34
PDLIM1O00151 AL162730.1-201ENST00000605734 292 ntBASIC0.46□□□□□ -2.34
PDLIM1O00151 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.46□□□□□ -2.34
PDLIM1O00151 Y_RNA.118-201ENST00000363300 101 ntBASIC0.45□□□□□ -2.34
PDLIM1O00151 Y_RNA.277-201ENST00000364754 102 ntBASIC0.45□□□□□ -2.34
PDLIM1O00151 Y_RNA.326-201ENST00000365176 113 ntBASIC0.45□□□□□ -2.34
PDLIM1O00151 RNU4-17P-201ENST00000365598 141 ntBASIC0.45□□□□□ -2.34
PDLIM1O00151 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.45□□□□□ -2.34
PDLIM1O00151 RNY1P8-201ENST00000383970 114 ntBASIC0.45□□□□□ -2.34
PDLIM1O00151 RNU6-1237P-201ENST00000384777 107 ntBASIC0.45□□□□□ -2.34
PDLIM1O00151 RNU6-1319P-201ENST00000390855 104 ntBASIC0.45□□□□□ -2.34
PDLIM1O00151 RNU6-747P-201ENST00000390928 104 ntBASIC0.45□□□□□ -2.34
PDLIM1O00151 RNU6-241P-201ENST00000391148 104 ntBASIC0.45□□□□□ -2.34
PDLIM1O00151 RNU6-381P-201ENST00000391259 108 ntBASIC0.45□□□□□ -2.34
PDLIM1O00151 MIR1257-201ENST00000408490 117 ntBASIC0.45□□□□□ -2.34
PDLIM1O00151 RNU6-447P-201ENST00000410293 104 ntBASIC0.45□□□□□ -2.34
PDLIM1O00151 RNU6-1118P-201ENST00000410382 104 ntBASIC0.45□□□□□ -2.34
PDLIM1O00151 RNU6-1076P-201ENST00000410397 104 ntBASIC0.45□□□□□ -2.34
PDLIM1O00151 RNU6-355P-201ENST00000410427 104 ntBASIC0.45□□□□□ -2.34
PDLIM1O00151 RNU6-791P-201ENST00000410467 104 ntBASIC0.45□□□□□ -2.34
PDLIM1O00151 RNU6-705P-201ENST00000410601 104 ntBASIC0.45□□□□□ -2.34
PDLIM1O00151 RNU6-1100P-201ENST00000410691 104 ntBASIC0.45□□□□□ -2.34
PDLIM1O00151 RNU6-860P-201ENST00000410860 104 ntBASIC0.45□□□□□ -2.34
PDLIM1O00151 RNU6-177P-201ENST00000411257 104 ntBASIC0.45□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms