Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 SCARNA24.2-201ENST00000516968 130 ntBASIC0.09□□□□□ -2.4
HMGB1P1B2RPK0 AC131281.1-201ENST00000522984 164 ntBASIC0.09□□□□□ -2.4
HMGB1P1B2RPK0 Y_RNA.13-201ENST00000362403 112 ntBASIC0.08□□□□□ -2.4
HMGB1P1B2RPK0 Y_RNA.214-201ENST00000364201 112 ntBASIC0.08□□□□□ -2.4
HMGB1P1B2RPK0 Y_RNA.338-201ENST00000365320 114 ntBASIC0.08□□□□□ -2.4
HMGB1P1B2RPK0 Y_RNA.354-201ENST00000365448 111 ntBASIC0.08□□□□□ -2.4
HMGB1P1B2RPK0 RNU6-211P-201ENST00000384047 107 ntBASIC0.08□□□□□ -2.4
HMGB1P1B2RPK0 RNU6-1228P-201ENST00000391014 107 ntBASIC0.08□□□□□ -2.4
HMGB1P1B2RPK0 AC112693.2-201ENST00000556538 232 ntBASIC0.08□□□□□ -2.4
HMGB1P1B2RPK0 MIR151B-201ENST00000584249 96 ntBASIC0.08□□□□□ -2.4
HMGB1P1B2RPK0 SNORA4-201ENST00000584302 138 ntBASIC0.08□□□□□ -2.4
HMGB1P1B2RPK0 RNA5SP432-201ENST00000362480 116 ntBASIC0.07□□□□□ -2.4
HMGB1P1B2RPK0 Y_RNA.42-201ENST00000362660 108 ntBASIC0.07□□□□□ -2.4
HMGB1P1B2RPK0 SNORD42.2-201ENST00000365570 69 ntBASIC0.07□□□□□ -2.4
HMGB1P1B2RPK0 Y_RNA.410-201ENST00000383992 113 ntBASIC0.07□□□□□ -2.4
HMGB1P1B2RPK0 SNORA26.6-201ENST00000391256 115 ntBASIC0.07□□□□□ -2.4
HMGB1P1B2RPK0 AL512326.2-201ENST00000426359 151 ntBASIC0.07□□□□□ -2.4
HMGB1P1B2RPK0 RNA5SP268-201ENST00000516828 124 ntBASIC0.07□□□□□ -2.4
HMGB1P1B2RPK0 Y_RNA.721-201ENST00000517207 102 ntBASIC0.07□□□□□ -2.4
HMGB1P1B2RPK0 MIR6504-201ENST00000613520 61 ntBASIC0.07□□□□□ -2.4
HMGB1P1B2RPK0 Y_RNA.210-201ENST00000364161 110 ntBASIC0.06□□□□□ -2.4
HMGB1P1B2RPK0 SNORA1-201ENST00000384107 130 ntBASIC0.06□□□□□ -2.4
HMGB1P1B2RPK0 RNY3P14-201ENST00000384309 102 ntBASIC0.06□□□□□ -2.4
HMGB1P1B2RPK0 MT-TD-201ENST00000387419 68 ntBASIC0.06□□□□□ -2.4
HMGB1P1B2RPK0 SNORA26-201ENST00000391286 122 ntBASIC0.06□□□□□ -2.4
HMGB1P1B2RPK0 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.06□□□□□ -2.4
HMGB1P1B2RPK0 MIR4315-1-201ENST00000636800 73 ntBASIC0.06□□□□□ -2.4
HMGB1P1B2RPK0 MIR4315-2-201ENST00000640925 73 ntBASIC0.06□□□□□ -2.4
HMGB1P1B2RPK0 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.05□□□□□ -2.4
HMGB1P1B2RPK0 Y_RNA.64-201ENST00000362845 102 ntBASIC0.05□□□□□ -2.4
HMGB1P1B2RPK0 RNU2-59P-201ENST00000410482 191 ntBASIC0.05□□□□□ -2.4
HMGB1P1B2RPK0 AC069271.1-201ENST00000445577 156 ntBASIC0.05□□□□□ -2.4
HMGB1P1B2RPK0 MTND5P22-201ENST00000458380 195 ntBASIC0.05□□□□□ -2.4
HMGB1P1B2RPK0 AL662814.1-201ENST00000617364 121 ntBASIC0.05□□□□□ -2.4
HMGB1P1B2RPK0 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC0.05□□□□□ -2.4
HMGB1P1B2RPK0 MIR376A2-201ENST00000636782 80 ntBASIC0.05□□□□□ -2.4
HMGB1P1B2RPK0 AL589743.1-201ENST00000551932 2712 ntBASIC0.04□□□□□ -2.4
HMGB1P1B2RPK0 Y_RNA.28-201ENST00000362554 111 ntBASIC0.04□□□□□ -2.4
HMGB1P1B2RPK0 Y_RNA.117-201ENST00000363294 101 ntBASIC0.04□□□□□ -2.4
HMGB1P1B2RPK0 RNU1-133P-201ENST00000364867 167 ntBASIC0.04□□□□□ -2.4
HMGB1P1B2RPK0 RNU6-484P-201ENST00000384016 107 ntBASIC0.04□□□□□ -2.4
HMGB1P1B2RPK0 Y_RNA.432-201ENST00000384087 111 ntBASIC0.04□□□□□ -2.4
HMGB1P1B2RPK0 RNU6-1289P-201ENST00000384431 106 ntBASIC0.04□□□□□ -2.4
HMGB1P1B2RPK0 SNORA72.6-201ENST00000384520 129 ntBASIC0.04□□□□□ -2.4
HMGB1P1B2RPK0 MIR626-201ENST00000385032 94 ntBASIC0.04□□□□□ -2.4
HMGB1P1B2RPK0 RNA5SP193-201ENST00000410353 107 ntBASIC0.04□□□□□ -2.4
HMGB1P1B2RPK0 SEPT7P4-201ENST00000437076 306 ntBASIC0.04□□□□□ -2.4
HMGB1P1B2RPK0 SUMO1P3-201ENST00000439961 304 ntBASIC0.04□□□□□ -2.4
HMGB1P1B2RPK0 RNU6-863P-201ENST00000515989 104 ntBASIC0.04□□□□□ -2.4
HMGB1P1B2RPK0 AL596211.1-201ENST00000569873 2277 ntBASIC0.04□□□□□ -2.4
HMGB1P1B2RPK0 Y_RNA.152-201ENST00000363578 100 ntBASIC0.03□□□□□ -2.4
HMGB1P1B2RPK0 Y_RNA.191-201ENST00000363972 113 ntBASIC0.03□□□□□ -2.4
HMGB1P1B2RPK0 SNRPGP8-201ENST00000454064 226 ntBASIC0.03□□□□□ -2.4
HMGB1P1B2RPK0 Y_RNA.32-201ENST00000362589 110 ntBASIC0.02□□□□□ -2.41
HMGB1P1B2RPK0 Y_RNA.199-201ENST00000364014 102 ntBASIC0.02□□□□□ -2.41
HMGB1P1B2RPK0 Y_RNA.423-201ENST00000384057 113 ntBASIC0.02□□□□□ -2.41
HMGB1P1B2RPK0 RNU6-474P-201ENST00000384243 107 ntBASIC0.02□□□□□ -2.41
HMGB1P1B2RPK0 Y_RNA.527-201ENST00000384573 102 ntBASIC0.02□□□□□ -2.41
HMGB1P1B2RPK0 U8.15-201ENST00000390947 134 ntBASIC0.02□□□□□ -2.41
HMGB1P1B2RPK0 MIR936-201ENST00000401264 98 ntBASIC0.02□□□□□ -2.41
HMGB1P1B2RPK0 RNU6-988P-201ENST00000519081 107 ntBASIC0.02□□□□□ -2.41
HMGB1P1B2RPK0 MIR5688-201ENST00000580619 83 ntBASIC0.02□□□□□ -2.41
HMGB1P1B2RPK0 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC0.02□□□□□ -2.41
HMGB1P1B2RPK0 MIR3129-201ENST00000581095 76 ntBASIC0.02□□□□□ -2.41
HMGB1P1B2RPK0 MIR4801-201ENST00000582704 82 ntBASIC0.02□□□□□ -2.41
HMGB1P1B2RPK0 RNU6-653P-201ENST00000363074 106 ntBASIC0.01□□□□□ -2.41
HMGB1P1B2RPK0 Y_RNA.431-201ENST00000384086 102 ntBASIC0.01□□□□□ -2.41
HMGB1P1B2RPK0 RNA5SP261-201ENST00000410536 106 ntBASIC0.01□□□□□ -2.41
HMGB1P1B2RPK0 RNU6-237P-201ENST00000515985 71 ntBASIC0.01□□□□□ -2.41
HMGB1P1B2RPK0 SNORA31.14-201ENST00000516728 116 ntBASIC0.01□□□□□ -2.41
HMGB1P1B2RPK0 MIR4452-201ENST00000583004 71 ntBASIC0.01□□□□□ -2.41
HMGB1P1B2RPK0 MIR6082-201ENST00000613604 109 ntBASIC0.01□□□□□ -2.41
HMGB1P1B2RPK0 Y_RNA.23-201ENST00000362496 106 ntBASIC0□□□□□ -2.41
HMGB1P1B2RPK0 RNA5SP214-201ENST00000363378 118 ntBASIC0□□□□□ -2.41
HMGB1P1B2RPK0 RNU7-129P-201ENST00000516128 62 ntBASIC0□□□□□ -2.41
HMGB1P1B2RPK0 RNU6-453P-201ENST00000516819 85 ntBASIC0□□□□□ -2.41
HMGB1P1B2RPK0 MIR7107-201ENST00000611489 80 ntBASIC0□□□□□ -2.41
HMGB1P1B2RPK0 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0□□□□□ -2.41
HMGB1P1B2RPK0 AL606845.1-201ENST00000404881 255 ntBASIC-0.01□□□□□ -2.41
HMGB1P1B2RPK0 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC-0.01□□□□□ -2.41
HMGB1P1B2RPK0 RNU2-55P-201ENST00000411146 174 ntBASIC-0.01□□□□□ -2.41
HMGB1P1B2RPK0 SERF1AP1-201ENST00000514575 187 ntBASIC-0.01□□□□□ -2.41
HMGB1P1B2RPK0 RNA5SP227-201ENST00000516184 113 ntBASIC-0.01□□□□□ -2.41
HMGB1P1B2RPK0 AP003327.1-201ENST00000529684 127 ntBASIC-0.01□□□□□ -2.41
HMGB1P1B2RPK0 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-0.01□□□□□ -2.41
HMGB1P1B2RPK0 PCNPP3-201ENST00000393579 471 ntBASIC-0.02□□□□□ -2.41
HMGB1P1B2RPK0 RNA5SP247-201ENST00000411181 105 ntBASIC-0.02□□□□□ -2.41
HMGB1P1B2RPK0 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-0.02□□□□□ -2.41
HMGB1P1B2RPK0 RNA5SP153-201ENST00000516498 76 ntBASIC-0.02□□□□□ -2.41
HMGB1P1B2RPK0 AC141846.1-201ENST00000568348 142 ntBASIC-0.02□□□□□ -2.41
HMGB1P1B2RPK0 AC104408.1-201ENST00000605241 170 ntBASIC-0.02□□□□□ -2.41
HMGB1P1B2RPK0 AC091932.4-201ENST00000623386 200 ntBASIC-0.02□□□□□ -2.41
HMGB1P1B2RPK0 MIR924-201ENST00000638017 53 ntBASIC-0.02□□□□□ -2.41
HMGB1P1B2RPK0 UBE2WP1-201ENST00000362030 340 ntBASIC-0.03□□□□□ -2.41
HMGB1P1B2RPK0 Y_RNA.84-201ENST00000363011 104 ntBASIC-0.03□□□□□ -2.41
HMGB1P1B2RPK0 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.03□□□□□ -2.41
HMGB1P1B2RPK0 RNU6-187P-201ENST00000384139 106 ntBASIC-0.03□□□□□ -2.41
HMGB1P1B2RPK0 Y_RNA.588-201ENST00000391254 102 ntBASIC-0.03□□□□□ -2.41
HMGB1P1B2RPK0 RNU6-1203P-201ENST00000410703 110 ntBASIC-0.03□□□□□ -2.41
HMGB1P1B2RPK0 MIR4491-201ENST00000581087 68 ntBASIC-0.03□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 171.6 ms