Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 Y_RNA.165-201ENST00000363721 102 ntBASIC-1.61□□□□□ -2.67
COL6A5A8TX70 RNU6-522P-201ENST00000364497 107 ntBASIC-1.61□□□□□ -2.67
COL6A5A8TX70 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC-1.61□□□□□ -2.67
COL6A5A8TX70 AC091179.3-201ENST00000474761 144 ntBASIC-1.61□□□□□ -2.67
COL6A5A8TX70 AC021451.1-201ENST00000523498 1129 ntBASIC-1.61□□□□□ -2.67
COL6A5A8TX70 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC-1.61□□□□□ -2.67
COL6A5A8TX70 MIR548AG2-201ENST00000581228 64 ntBASIC-1.61□□□□□ -2.67
COL6A5A8TX70 AC096586.1-201ENST00000610267 561 ntBASIC-1.61□□□□□ -2.67
COL6A5A8TX70 MIR8055-201ENST00000610739 97 ntBASIC-1.61□□□□□ -2.67
COL6A5A8TX70 AP001282.2-201ENST00000616149 309 ntBASIC-1.61□□□□□ -2.67
COL6A5A8TX70 Y_RNA.110-201ENST00000363220 99 ntBASIC-1.61□□□□□ -2.67
COL6A5A8TX70 RNU4-85P-201ENST00000364675 123 ntBASIC-1.61□□□□□ -2.67
COL6A5A8TX70 AL590004.1-201ENST00000405321 300 ntBASIC-1.61□□□□□ -2.67
COL6A5A8TX70 AC002542.1-201ENST00000440683 193 ntBASIC-1.61□□□□□ -2.67
COL6A5A8TX70 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC-1.61□□□□□ -2.67
COL6A5A8TX70 AC104072.1-201ENST00000568817 668 ntBASIC-1.61□□□□□ -2.67
COL6A5A8TX70 AC022441.3-201ENST00000605737 136 ntBASIC-1.61□□□□□ -2.67
COL6A5A8TX70 AL008718.3-201ENST00000610217 321 ntBASIC-1.61□□□□□ -2.67
COL6A5A8TX70 PISRT1.1-201ENST00000616930 107 ntBASIC-1.61□□□□□ -2.67
COL6A5A8TX70 RNU5E-7P-201ENST00000365290 117 ntBASIC-1.62□□□□□ -2.67
COL6A5A8TX70 MIR586-201ENST00000385035 97 ntBASIC-1.62□□□□□ -2.67
COL6A5A8TX70 MIR599-201ENST00000385069 95 ntBASIC-1.62□□□□□ -2.67
COL6A5A8TX70 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC-1.62□□□□□ -2.67
COL6A5A8TX70 AL139421.1-201ENST00000423010 169 ntBASIC-1.62□□□□□ -2.67
COL6A5A8TX70 MTCO1P57-201ENST00000432182 261 ntBASIC-1.62□□□□□ -2.67
COL6A5A8TX70 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC-1.62□□□□□ -2.67
COL6A5A8TX70 RNU6-559P-201ENST00000516151 98 ntBASIC-1.62□□□□□ -2.67
COL6A5A8TX70 RNU6-531P-201ENST00000516694 104 ntBASIC-1.62□□□□□ -2.67
COL6A5A8TX70 AC124312.5-201ENST00000604451 268 ntBASIC-1.62□□□□□ -2.67
COL6A5A8TX70 RNU4-58P-201ENST00000363192 141 ntBASIC-1.62□□□□□ -2.67
COL6A5A8TX70 RNU6-324P-201ENST00000363957 106 ntBASIC-1.62□□□□□ -2.67
COL6A5A8TX70 SNORD114-4-201ENST00000363962 75 ntBASIC-1.62□□□□□ -2.67
COL6A5A8TX70 MIR548E-201ENST00000408287 88 ntBASIC-1.62□□□□□ -2.67
COL6A5A8TX70 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC-1.62□□□□□ -2.67
COL6A5A8TX70 RNU7-67P-201ENST00000459003 62 ntBASIC-1.62□□□□□ -2.67
COL6A5A8TX70 AC091946.2-201ENST00000606105 291 ntBASIC-1.62□□□□□ -2.67
COL6A5A8TX70 Six3os1_7.1-201ENST00000621512 201 ntBASIC-1.62□□□□□ -2.67
COL6A5A8TX70 RNU6-552P-201ENST00000362869 119 ntBASIC-1.63□□□□□ -2.67
COL6A5A8TX70 snoU2-30.1-201ENST00000365012 70 ntBASIC-1.63□□□□□ -2.67
COL6A5A8TX70 RNU6-325P-201ENST00000411132 105 ntBASIC-1.63□□□□□ -2.67
COL6A5A8TX70 AL157392.4-201ENST00000609756 345 ntBASIC-1.63□□□□□ -2.67
COL6A5A8TX70 RNU6-181P-201ENST00000363225 107 ntBASIC-1.63□□□□□ -2.67
COL6A5A8TX70 RNU6-1169P-201ENST00000363537 103 ntBASIC-1.63□□□□□ -2.67
COL6A5A8TX70 RNU6-1284P-201ENST00000363701 100 ntBASIC-1.63□□□□□ -2.67
COL6A5A8TX70 Y_RNA.281-201ENST00000364774 94 ntBASIC-1.63□□□□□ -2.67
COL6A5A8TX70 RNU6-136P-201ENST00000384663 107 ntBASIC-1.63□□□□□ -2.67
COL6A5A8TX70 MTND5P42-201ENST00000637720 498 ntBASIC-1.63□□□□□ -2.67
COL6A5A8TX70 AC103706.2-201ENST00000638080 240 ntBASIC-1.63□□□□□ -2.67
COL6A5A8TX70 MTCO1P29-201ENST00000496868 288 ntBASIC-1.64□□□□□ -2.67
COL6A5A8TX70 RNU7-172P-201ENST00000517125 64 ntBASIC-1.64□□□□□ -2.67
COL6A5A8TX70 SNORA72.3-201ENST00000365074 132 ntBASIC-1.64□□□□□ -2.67
COL6A5A8TX70 RNU6-831P-201ENST00000384548 107 ntBASIC-1.64□□□□□ -2.67
COL6A5A8TX70 RNU5A-5P-201ENST00000411054 116 ntBASIC-1.64□□□□□ -2.67
COL6A5A8TX70 RNU6-830P-201ENST00000516353 107 ntBASIC-1.64□□□□□ -2.67
COL6A5A8TX70 RNU6-1057P-201ENST00000517162 102 ntBASIC-1.64□□□□□ -2.67
COL6A5A8TX70 AC087883.1-201ENST00000551882 391 ntBASIC-1.64□□□□□ -2.67
COL6A5A8TX70 AC009159.2-201ENST00000617603 606 ntBASIC-1.64□□□□□ -2.67
COL6A5A8TX70 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC-1.65□□□□□ -2.67
COL6A5A8TX70 AC078809.1-201ENST00000427601 140 ntBASIC-1.65□□□□□ -2.67
COL6A5A8TX70 MIR23C-201ENST00000579846 100 ntBASIC-1.65□□□□□ -2.67
COL6A5A8TX70 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-1.65□□□□□ -2.67
COL6A5A8TX70 MIR548AJ2-201ENST00000408539 92 ntBASIC-1.65□□□□□ -2.67
COL6A5A8TX70 AL512360.1-201ENST00000555346 234 ntBASIC-1.65□□□□□ -2.67
COL6A5A8TX70 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC-1.65□□□□□ -2.67
COL6A5A8TX70 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC-1.65□□□□□ -2.67
COL6A5A8TX70 MIR3646-201ENST00000578301 84 ntBASIC-1.65□□□□□ -2.67
COL6A5A8TX70 Y_RNA.342-201ENST00000365352 113 ntBASIC-1.66□□□□□ -2.67
COL6A5A8TX70 RNU6-108P-201ENST00000365558 107 ntBASIC-1.66□□□□□ -2.67
COL6A5A8TX70 RNU6-167P-201ENST00000384292 106 ntBASIC-1.66□□□□□ -2.67
COL6A5A8TX70 MIR522-201ENST00000385071 87 ntBASIC-1.66□□□□□ -2.67
COL6A5A8TX70 Y_RNA.601-201ENST00000410500 113 ntBASIC-1.66□□□□□ -2.67
COL6A5A8TX70 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC-1.66□□□□□ -2.67
COL6A5A8TX70 TRAJ51-201ENST00000504127 63 ntBASIC-1.66□□□□□ -2.67
COL6A5A8TX70 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC-1.66□□□□□ -2.67
COL6A5A8TX70 AC090502.2-201ENST00000549267 280 ntBASIC-1.66□□□□□ -2.67
COL6A5A8TX70 RNU7-10P-201ENST00000607194 63 ntBASIC-1.66□□□□□ -2.67
COL6A5A8TX70 AC127459.3-201ENST00000624328 466 ntBASIC-1.66□□□□□ -2.67
COL6A5A8TX70 RNA5SP133-201ENST00000363368 119 ntBASIC-1.66□□□□□ -2.68
COL6A5A8TX70 RNU6-961P-201ENST00000363893 105 ntBASIC-1.66□□□□□ -2.68
COL6A5A8TX70 RNU6-645P-201ENST00000364649 106 ntBASIC-1.66□□□□□ -2.68
COL6A5A8TX70 RNU6-867P-201ENST00000364956 107 ntBASIC-1.66□□□□□ -2.68
COL6A5A8TX70 Y_RNA.504-201ENST00000384481 104 ntBASIC-1.66□□□□□ -2.68
COL6A5A8TX70 MIR1255B2-201ENST00000408618 67 ntBASIC-1.66□□□□□ -2.68
COL6A5A8TX70 MTCO2P11-201ENST00000431069 680 ntBASIC-1.66□□□□□ -2.68
COL6A5A8TX70 SNORD65B-201ENST00000459126 73 ntBASIC-1.66□□□□□ -2.68
COL6A5A8TX70 PIGPP4-201ENST00000584447 307 ntBASIC-1.66□□□□□ -2.68
COL6A5A8TX70 TUSC7.1-201ENST00000610969 165 ntBASIC-1.66□□□□□ -2.68
COL6A5A8TX70 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC-1.66□□□□□ -2.68
COL6A5A8TX70 AF228730.4-201ENST00000421457 183 ntBASIC-1.67□□□□□ -2.68
COL6A5A8TX70 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC-1.67□□□□□ -2.68
COL6A5A8TX70 AC023449.1-201ENST00000454464 154 ntBASIC-1.67□□□□□ -2.68
COL6A5A8TX70 RNU6-1208P-201ENST00000459588 107 ntBASIC-1.67□□□□□ -2.68
COL6A5A8TX70 AC008507.2-201ENST00000588402 1176 ntBASIC-1.67□□□□□ -2.68
COL6A5A8TX70 AC006435.5-201ENST00000624486 112 ntBASIC-1.67□□□□□ -2.68
COL6A5A8TX70 Y_RNA.24-201ENST00000362508 103 ntBASIC-1.67□□□□□ -2.68
COL6A5A8TX70 Y_RNA.159-201ENST00000363674 87 ntBASIC-1.67□□□□□ -2.68
COL6A5A8TX70 RNY1P1-201ENST00000364372 112 ntBASIC-1.67□□□□□ -2.68
COL6A5A8TX70 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.67□□□□□ -2.68
COL6A5A8TX70 Y_RNA.401-201ENST00000383965 117 ntBASIC-1.67□□□□□ -2.68
COL6A5A8TX70 Y_RNA.534-201ENST00000384599 112 ntBASIC-1.67□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms