Protein–RNA interactions for Protein: A4FU49

SH3D21, SH3 domain-containing protein 21, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21A4FU49 MIR548Z-201ENST00000584743 97 ntBASIC2.19□□□□□ -2.06
SH3D21A4FU49 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
SH3D21A4FU49 AP006437.1-201ENST00000641440 3685 ntBASIC2.19□□□□□ -2.06
SH3D21A4FU49 Y_RNA.17-201ENST00000362433 111 ntBASIC2.18□□□□□ -2.06
SH3D21A4FU49 SNORA70.7-201ENST00000384159 133 ntBASIC2.18□□□□□ -2.06
SH3D21A4FU49 RNU6-616P-201ENST00000384353 107 ntBASIC2.18□□□□□ -2.06
SH3D21A4FU49 SNORA18-201ENST00000384416 132 ntBASIC2.18□□□□□ -2.06
SH3D21A4FU49 MIR136-201ENST00000385207 82 ntBASIC2.18□□□□□ -2.06
SH3D21A4FU49 RNU6-1319P-201ENST00000390855 104 ntBASIC2.18□□□□□ -2.06
SH3D21A4FU49 RNU6-747P-201ENST00000390928 104 ntBASIC2.18□□□□□ -2.06
SH3D21A4FU49 RNU6-241P-201ENST00000391148 104 ntBASIC2.18□□□□□ -2.06
SH3D21A4FU49 SNORA3.2-201ENST00000408221 125 ntBASIC2.18□□□□□ -2.06
SH3D21A4FU49 Y_RNA.593-201ENST00000410292 98 ntBASIC2.18□□□□□ -2.06
SH3D21A4FU49 RNU6-177P-201ENST00000411257 104 ntBASIC2.18□□□□□ -2.06
SH3D21A4FU49 AC004941.2-201ENST00000427009 228 ntBASIC2.18□□□□□ -2.06
SH3D21A4FU49 AC055731.1-201ENST00000474387 401 ntBASIC2.18□□□□□ -2.06
SH3D21A4FU49 RPL23AP63-201ENST00000498752 471 ntBASIC2.18□□□□□ -2.06
SH3D21A4FU49 AC022254.1-201ENST00000567857 235 ntBASIC2.18□□□□□ -2.06
SH3D21A4FU49 MIR3152-201ENST00000579801 74 ntBASIC2.18□□□□□ -2.06
SH3D21A4FU49 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.18□□□□□ -2.06
SH3D21A4FU49 U7.3-201ENST00000616123 62 ntBASIC2.18□□□□□ -2.06
SH3D21A4FU49 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
SH3D21A4FU49 AL359851.1-201ENST00000569460 4997 ntBASIC2.17□□□□□ -2.06
SH3D21A4FU49 SNORA22.1-201ENST00000362701 134 ntBASIC2.17□□□□□ -2.06
SH3D21A4FU49 Y_RNA.470-201ENST00000384307 117 ntBASIC2.17□□□□□ -2.06
SH3D21A4FU49 MIR452-201ENST00000385020 85 ntBASIC2.17□□□□□ -2.06
SH3D21A4FU49 RNU6-679P-201ENST00000391003 106 ntBASIC2.17□□□□□ -2.06
SH3D21A4FU49 SNORD77B-201ENST00000391112 67 ntBASIC2.17□□□□□ -2.06
SH3D21A4FU49 RNU2-7P-201ENST00000410794 178 ntBASIC2.17□□□□□ -2.06
SH3D21A4FU49 RNU7-34P-201ENST00000459394 64 ntBASIC2.17□□□□□ -2.06
SH3D21A4FU49 RNU7-53P-201ENST00000516705 60 ntBASIC2.17□□□□□ -2.06
SH3D21A4FU49 MIR548AE2-201ENST00000583456 67 ntBASIC2.17□□□□□ -2.06
SH3D21A4FU49 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.17□□□□□ -2.06
SH3D21A4FU49 AC016717.2-201ENST00000609089 5141 ntBASIC2.17□□□□□ -2.06
SH3D21A4FU49 RNU6-1152P-201ENST00000384576 107 ntBASIC2.16□□□□□ -2.06
SH3D21A4FU49 RNU6-1031P-201ENST00000384773 107 ntBASIC2.16□□□□□ -2.06
SH3D21A4FU49 AL359511.1-201ENST00000402970 211 ntBASIC2.16□□□□□ -2.06
SH3D21A4FU49 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.16□□□□□ -2.06
SH3D21A4FU49 RNA5SP425-201ENST00000410336 112 ntBASIC2.16□□□□□ -2.06
SH3D21A4FU49 HMGN2P3-201ENST00000433603 273 ntBASIC2.16□□□□□ -2.06
SH3D21A4FU49 HMGN2P5-201ENST00000436882 273 ntBASIC2.16□□□□□ -2.06
SH3D21A4FU49 AL353813.1-201ENST00000440700 253 ntBASIC2.16□□□□□ -2.06
SH3D21A4FU49 AC104435.1-201ENST00000483483 166 ntBASIC2.16□□□□□ -2.06
SH3D21A4FU49 AC234781.5-201ENST00000508429 271 ntBASIC2.16□□□□□ -2.06
SH3D21A4FU49 Y_RNA.659-201ENST00000515994 113 ntBASIC2.16□□□□□ -2.06
SH3D21A4FU49 RNU6-638P-201ENST00000516582 104 ntBASIC2.16□□□□□ -2.06
SH3D21A4FU49 RNA5SP137-201ENST00000516833 135 ntBASIC2.16□□□□□ -2.06
SH3D21A4FU49 RNU2-19P-201ENST00000517288 84 ntBASIC2.16□□□□□ -2.06
SH3D21A4FU49 MIR4791-201ENST00000607666 84 ntBASIC2.16□□□□□ -2.06
SH3D21A4FU49 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.16□□□□□ -2.06
SH3D21A4FU49 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
SH3D21A4FU49 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
SH3D21A4FU49 AL442644.1-201ENST00000454390 3105 ntBASIC2.15□□□□□ -2.06
SH3D21A4FU49 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
SH3D21A4FU49 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.06
SH3D21A4FU49 HMGN2P39-201ENST00000398005 273 ntBASIC2.15□□□□□ -2.07
SH3D21A4FU49 RNU6-1190P-201ENST00000410811 104 ntBASIC2.15□□□□□ -2.07
SH3D21A4FU49 Z98742.3-201ENST00000418637 326 ntBASIC2.15□□□□□ -2.07
SH3D21A4FU49 RPS29P29-201ENST00000456396 171 ntBASIC2.15□□□□□ -2.07
SH3D21A4FU49 RNU2-13P-201ENST00000515909 113 ntBASIC2.15□□□□□ -2.07
SH3D21A4FU49 RNVU1-2-201ENST00000516326 135 ntBASIC2.15□□□□□ -2.07
SH3D21A4FU49 AC091304.10-201ENST00000641554 121 ntBASIC2.15□□□□□ -2.07
SH3D21A4FU49 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.15□□□□□ -2.07
SH3D21A4FU49 SNORD115-2-201ENST00000362842 82 ntBASIC2.14□□□□□ -2.07
SH3D21A4FU49 Y_RNA.219-201ENST00000364232 113 ntBASIC2.14□□□□□ -2.07
SH3D21A4FU49 RNY1P1-201ENST00000364372 112 ntBASIC2.14□□□□□ -2.07
SH3D21A4FU49 SNORD115-20-201ENST00000365099 82 ntBASIC2.14□□□□□ -2.07
SH3D21A4FU49 RNA5SP37-201ENST00000365420 130 ntBASIC2.14□□□□□ -2.07
SH3D21A4FU49 SNORA32-201ENST00000384072 121 ntBASIC2.14□□□□□ -2.07
SH3D21A4FU49 MIR17-201ENST00000385012 84 ntBASIC2.14□□□□□ -2.07
SH3D21A4FU49 SNORD78.1-201ENST00000390866 65 ntBASIC2.14□□□□□ -2.07
SH3D21A4FU49 MIR1283-2-201ENST00000408621 87 ntBASIC2.14□□□□□ -2.07
SH3D21A4FU49 MIR1270-201ENST00000459320 83 ntBASIC2.14□□□□□ -2.07
SH3D21A4FU49 SCARNA16.3-201ENST00000516595 184 ntBASIC2.14□□□□□ -2.07
SH3D21A4FU49 RNU6-521P-201ENST00000516663 105 ntBASIC2.14□□□□□ -2.07
SH3D21A4FU49 MIR548AR-201ENST00000582191 57 ntBASIC2.14□□□□□ -2.07
SH3D21A4FU49 IGLL4P-201ENST00000614590 133 ntBASIC2.14□□□□□ -2.07
SH3D21A4FU49 MIR6841-201ENST00000637129 72 ntBASIC2.14□□□□□ -2.07
SH3D21A4FU49 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.14□□□□□ -2.07
SH3D21A4FU49 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
SH3D21A4FU49 SNORD45B-201ENST00000364617 72 ntBASIC2.13□□□□□ -2.07
SH3D21A4FU49 RNU6-60P-201ENST00000364792 103 ntBASIC2.13□□□□□ -2.07
SH3D21A4FU49 MIR520A-201ENST00000384862 85 ntBASIC2.13□□□□□ -2.07
SH3D21A4FU49 SNORD28B-201ENST00000390993 75 ntBASIC2.13□□□□□ -2.07
SH3D21A4FU49 SNORA26.6-201ENST00000391256 115 ntBASIC2.13□□□□□ -2.07
SH3D21A4FU49 RNA5SP261-201ENST00000410536 106 ntBASIC2.13□□□□□ -2.07
SH3D21A4FU49 AC096949.1-201ENST00000412047 152 ntBASIC2.13□□□□□ -2.07
SH3D21A4FU49 MRPL35P3-201ENST00000421557 364 ntBASIC2.13□□□□□ -2.07
SH3D21A4FU49 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.13□□□□□ -2.07
SH3D21A4FU49 snoU13.26-201ENST00000459452 105 ntBASIC2.13□□□□□ -2.07
SH3D21A4FU49 SNORD123-201ENST00000459473 70 ntBASIC2.13□□□□□ -2.07
SH3D21A4FU49 AC022137.1-201ENST00000483735 151 ntBASIC2.13□□□□□ -2.07
SH3D21A4FU49 MIR4777-201ENST00000583710 86 ntBASIC2.13□□□□□ -2.07
SH3D21A4FU49 AC243994.1-201ENST00000618627 109 ntBASIC2.13□□□□□ -2.07
SH3D21A4FU49 MIR6717-201ENST00000622747 73 ntBASIC2.13□□□□□ -2.07
SH3D21A4FU49 MIR1291-201ENST00000627649 87 ntBASIC2.13□□□□□ -2.07
SH3D21A4FU49 AL512310.12-203ENST00000640543 90 ntBASIC2.13□□□□□ -2.07
SH3D21A4FU49 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
SH3D21A4FU49 RNU6-913P-201ENST00000390913 95 ntBASIC2.12□□□□□ -2.07
SH3D21A4FU49 BTF3P4-201ENST00000418852 495 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms