Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 RNU6-365P-201ENST00000517113 106 ntBASIC0.5□□□□□ -2.33
SMIM28A0A1B0GU29 RN7SL793P-201ENST00000583259 296 ntBASIC0.5□□□□□ -2.33
SMIM28A0A1B0GU29 Y_RNA.771-201ENST00000598668 102 ntBASIC0.5□□□□□ -2.33
SMIM28A0A1B0GU29 AC097639.2-201ENST00000603159 172 ntBASIC0.5□□□□□ -2.33
SMIM28A0A1B0GU29 Y_RNA.789-201ENST00000622480 102 ntBASIC0.5□□□□□ -2.33
SMIM28A0A1B0GU29 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.5□□□□□ -2.33
SMIM28A0A1B0GU29 AC010332.2-201ENST00000613083 1904 ntBASIC0.5□□□□□ -2.33
SMIM28A0A1B0GU29 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.49□□□□□ -2.33
SMIM28A0A1B0GU29 RNU6-934P-201ENST00000365154 107 ntBASIC0.49□□□□□ -2.33
SMIM28A0A1B0GU29 RNU6-713P-201ENST00000384761 107 ntBASIC0.49□□□□□ -2.33
SMIM28A0A1B0GU29 MIR520F-201ENST00000384824 87 ntBASIC0.49□□□□□ -2.33
SMIM28A0A1B0GU29 MIR520H-201ENST00000385126 88 ntBASIC0.49□□□□□ -2.33
SMIM28A0A1B0GU29 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.49□□□□□ -2.33
SMIM28A0A1B0GU29 RNA5SP222-201ENST00000411039 105 ntBASIC0.49□□□□□ -2.33
SMIM28A0A1B0GU29 AL442663.2-201ENST00000554385 511 ntBASIC0.49□□□□□ -2.33
SMIM28A0A1B0GU29 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
SMIM28A0A1B0GU29 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.48□□□□□ -2.33
SMIM28A0A1B0GU29 Y_RNA.23-201ENST00000362496 106 ntBASIC0.48□□□□□ -2.33
SMIM28A0A1B0GU29 SNORA1-201ENST00000384107 130 ntBASIC0.48□□□□□ -2.33
SMIM28A0A1B0GU29 Y_RNA.461-201ENST00000384263 103 ntBASIC0.48□□□□□ -2.33
SMIM28A0A1B0GU29 Y_RNA.518-201ENST00000384552 113 ntBASIC0.48□□□□□ -2.33
SMIM28A0A1B0GU29 AL606845.1-201ENST00000404881 255 ntBASIC0.48□□□□□ -2.33
SMIM28A0A1B0GU29 MIR548I3-201ENST00000408378 149 ntBASIC0.48□□□□□ -2.33
SMIM28A0A1B0GU29 RNU6-602P-201ENST00000411155 105 ntBASIC0.48□□□□□ -2.33
SMIM28A0A1B0GU29 SNRPGP8-201ENST00000454064 226 ntBASIC0.48□□□□□ -2.33
SMIM28A0A1B0GU29 RNU6-998P-201ENST00000515894 101 ntBASIC0.48□□□□□ -2.33
SMIM28A0A1B0GU29 RNU6-1299P-201ENST00000516316 100 ntBASIC0.48□□□□□ -2.33
SMIM28A0A1B0GU29 MIR4676-201ENST00000583078 72 ntBASIC0.48□□□□□ -2.33
SMIM28A0A1B0GU29 MIR8062-201ENST00000621515 85 ntBASIC0.48□□□□□ -2.33
SMIM28A0A1B0GU29 RNU6-653P-201ENST00000363074 106 ntBASIC0.47□□□□□ -2.33
SMIM28A0A1B0GU29 RNU6-238P-201ENST00000363313 106 ntBASIC0.47□□□□□ -2.33
SMIM28A0A1B0GU29 Y_RNA.304-201ENST00000365011 112 ntBASIC0.47□□□□□ -2.33
SMIM28A0A1B0GU29 Y_RNA.326-201ENST00000365176 113 ntBASIC0.47□□□□□ -2.33
SMIM28A0A1B0GU29 Y_RNA.432-201ENST00000384087 111 ntBASIC0.47□□□□□ -2.33
SMIM28A0A1B0GU29 Y_RNA.440-201ENST00000384120 114 ntBASIC0.47□□□□□ -2.33
SMIM28A0A1B0GU29 RNU6-381P-201ENST00000391259 108 ntBASIC0.47□□□□□ -2.33
SMIM28A0A1B0GU29 RNU6-177P-201ENST00000411257 104 ntBASIC0.47□□□□□ -2.33
SMIM28A0A1B0GU29 RNU2-11P-201ENST00000459191 187 ntBASIC0.47□□□□□ -2.33
SMIM28A0A1B0GU29 RNU6-561P-201ENST00000516222 102 ntBASIC0.47□□□□□ -2.33
SMIM28A0A1B0GU29 RNU6-977P-201ENST00000516411 103 ntBASIC0.47□□□□□ -2.33
SMIM28A0A1B0GU29 RNU4-54P-201ENST00000516428 129 ntBASIC0.47□□□□□ -2.33
SMIM28A0A1B0GU29 RNU6-504P-201ENST00000516568 104 ntBASIC0.47□□□□□ -2.33
SMIM28A0A1B0GU29 RNU7-53P-201ENST00000516705 60 ntBASIC0.47□□□□□ -2.33
SMIM28A0A1B0GU29 RNA5SP480-201ENST00000516840 109 ntBASIC0.47□□□□□ -2.33
SMIM28A0A1B0GU29 Y_RNA.720-201ENST00000517166 92 ntBASIC0.47□□□□□ -2.33
SMIM28A0A1B0GU29 MIR4643-201ENST00000577473 78 ntBASIC0.47□□□□□ -2.33
SMIM28A0A1B0GU29 MIR4804-201ENST00000581683 73 ntBASIC0.47□□□□□ -2.33
SMIM28A0A1B0GU29 MIR4282-201ENST00000583613 67 ntBASIC0.47□□□□□ -2.33
SMIM28A0A1B0GU29 MIR5087-201ENST00000635826 76 ntBASIC0.47□□□□□ -2.33
SMIM28A0A1B0GU29 AL589743.1-201ENST00000551932 2712 ntBASIC0.47□□□□□ -2.33
SMIM28A0A1B0GU29 MIR335-201ENST00000362173 94 ntBASIC0.46□□□□□ -2.34
SMIM28A0A1B0GU29 SNORD114-26-201ENST00000363543 72 ntBASIC0.46□□□□□ -2.34
SMIM28A0A1B0GU29 SNORD18A-201ENST00000363753 72 ntBASIC0.46□□□□□ -2.34
SMIM28A0A1B0GU29 Y_RNA.396-201ENST00000383949 103 ntBASIC0.46□□□□□ -2.34
SMIM28A0A1B0GU29 SNORA36.2-201ENST00000384004 127 ntBASIC0.46□□□□□ -2.34
SMIM28A0A1B0GU29 RNY1P4-201ENST00000384595 115 ntBASIC0.46□□□□□ -2.34
SMIM28A0A1B0GU29 MIR588-201ENST00000384900 83 ntBASIC0.46□□□□□ -2.34
SMIM28A0A1B0GU29 MIR616-201ENST00000385293 97 ntBASIC0.46□□□□□ -2.34
SMIM28A0A1B0GU29 SNORD77.3-201ENST00000391113 65 ntBASIC0.46□□□□□ -2.34
SMIM28A0A1B0GU29 Y_RNA.590-201ENST00000410140 107 ntBASIC0.46□□□□□ -2.34
SMIM28A0A1B0GU29 RNU2-70P-201ENST00000410718 179 ntBASIC0.46□□□□□ -2.34
SMIM28A0A1B0GU29 RNU7-45P-201ENST00000459460 63 ntBASIC0.46□□□□□ -2.34
SMIM28A0A1B0GU29 RNU7-96P-201ENST00000459535 64 ntBASIC0.46□□□□□ -2.34
SMIM28A0A1B0GU29 RNA5SP153-201ENST00000516498 76 ntBASIC0.46□□□□□ -2.34
SMIM28A0A1B0GU29 RNU6-126P-201ENST00000516685 103 ntBASIC0.46□□□□□ -2.34
SMIM28A0A1B0GU29 AC011921.3-201ENST00000605540 361 ntBASIC0.46□□□□□ -2.34
SMIM28A0A1B0GU29 AL365265.1-201ENST00000621045 234 ntBASIC0.46□□□□□ -2.34
SMIM28A0A1B0GU29 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.45□□□□□ -2.34
SMIM28A0A1B0GU29 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.45□□□□□ -2.34
SMIM28A0A1B0GU29 Y_RNA.7-201ENST00000362352 102 ntBASIC0.45□□□□□ -2.34
SMIM28A0A1B0GU29 Y_RNA.36-201ENST00000362602 112 ntBASIC0.45□□□□□ -2.34
SMIM28A0A1B0GU29 SNORD114-23-201ENST00000363536 72 ntBASIC0.45□□□□□ -2.34
SMIM28A0A1B0GU29 SNORA1.1-201ENST00000364671 133 ntBASIC0.45□□□□□ -2.34
SMIM28A0A1B0GU29 RNU6-1160P-201ENST00000384546 104 ntBASIC0.45□□□□□ -2.34
SMIM28A0A1B0GU29 SNORD38B-201ENST00000384690 67 ntBASIC0.45□□□□□ -2.34
SMIM28A0A1B0GU29 Y_RNA.574-201ENST00000384766 95 ntBASIC0.45□□□□□ -2.34
SMIM28A0A1B0GU29 SNORD12C-201ENST00000386307 89 ntBASIC0.45□□□□□ -2.34
SMIM28A0A1B0GU29 SNORA26.6-201ENST00000391256 115 ntBASIC0.45□□□□□ -2.34
SMIM28A0A1B0GU29 RNU6-1165P-201ENST00000410119 107 ntBASIC0.45□□□□□ -2.34
SMIM28A0A1B0GU29 RNU2-55P-201ENST00000411146 174 ntBASIC0.45□□□□□ -2.34
SMIM28A0A1B0GU29 AC018659.1-201ENST00000551083 169 ntBASIC0.45□□□□□ -2.34
SMIM28A0A1B0GU29 Z83818.1-201ENST00000603584 150 ntBASIC0.45□□□□□ -2.34
SMIM28A0A1B0GU29 uc_338.17-201ENST00000619633 179 ntBASIC0.45□□□□□ -2.34
SMIM28A0A1B0GU29 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.45□□□□□ -2.34
SMIM28A0A1B0GU29 SNORD38B-202ENST00000625943 69 ntBASIC0.45□□□□□ -2.34
SMIM28A0A1B0GU29 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
SMIM28A0A1B0GU29 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.45□□□□□ -2.34
SMIM28A0A1B0GU29 Y_RNA.11-201ENST00000362375 109 ntBASIC0.44□□□□□ -2.34
SMIM28A0A1B0GU29 RNU6-1309P-201ENST00000363305 108 ntBASIC0.44□□□□□ -2.34
SMIM28A0A1B0GU29 SNORA63C-201ENST00000364578 129 ntBASIC0.44□□□□□ -2.34
SMIM28A0A1B0GU29 RNY3P5-201ENST00000384127 102 ntBASIC0.44□□□□□ -2.34
SMIM28A0A1B0GU29 MIR563-201ENST00000385080 79 ntBASIC0.44□□□□□ -2.34
SMIM28A0A1B0GU29 RNU7-56P-201ENST00000458744 62 ntBASIC0.44□□□□□ -2.34
SMIM28A0A1B0GU29 snoU13.2-201ENST00000459201 104 ntBASIC0.44□□□□□ -2.34
SMIM28A0A1B0GU29 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.44□□□□□ -2.34
SMIM28A0A1B0GU29 MIR3612-201ENST00000579753 87 ntBASIC0.44□□□□□ -2.34
SMIM28A0A1B0GU29 AC008608.1-201ENST00000603910 127 ntBASIC0.44□□□□□ -2.34
SMIM28A0A1B0GU29 AC243829.6-201ENST00000612652 106 ntBASIC0.44□□□□□ -2.34
SMIM28A0A1B0GU29 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.44□□□□□ -2.34
SMIM28A0A1B0GU29 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.43□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 130.1 ms