Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 RNU6-306P-201ENST00000384617 107 ntBASIC-1.44□□□□□ -2.64
TRAV1-2A0A0B4J238 MIR519E-201ENST00000385075 84 ntBASIC-1.44□□□□□ -2.64
TRAV1-2A0A0B4J238 SNORA49-201ENST00000386157 136 ntBASIC-1.44□□□□□ -2.64
TRAV1-2A0A0B4J238 RNA5SP266-201ENST00000410273 108 ntBASIC-1.44□□□□□ -2.64
TRAV1-2A0A0B4J238 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC-1.44□□□□□ -2.64
TRAV1-2A0A0B4J238 AC244090.1-201ENST00000441884 93 ntBASIC-1.44□□□□□ -2.64
TRAV1-2A0A0B4J238 AC098826.2-201ENST00000452011 651 ntBASIC-1.44□□□□□ -2.64
TRAV1-2A0A0B4J238 NDUFAF4P4-201ENST00000454883 502 ntBASIC-1.44□□□□□ -2.64
TRAV1-2A0A0B4J238 RNU7-79P-201ENST00000516082 62 ntBASIC-1.44□□□□□ -2.64
TRAV1-2A0A0B4J238 SNORA40.17-201ENST00000517256 115 ntBASIC-1.44□□□□□ -2.64
TRAV1-2A0A0B4J238 AC024933.1-201ENST00000608472 348 ntBASIC-1.44□□□□□ -2.64
TRAV1-2A0A0B4J238 SNORD115-25-201ENST00000362619 82 ntBASIC-1.45□□□□□ -2.64
TRAV1-2A0A0B4J238 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.45□□□□□ -2.64
TRAV1-2A0A0B4J238 Y_RNA.372-201ENST00000365599 102 ntBASIC-1.45□□□□□ -2.64
TRAV1-2A0A0B4J238 Y_RNA.407-201ENST00000383986 113 ntBASIC-1.45□□□□□ -2.64
TRAV1-2A0A0B4J238 MIR513B-201ENST00000385136 84 ntBASIC-1.45□□□□□ -2.64
TRAV1-2A0A0B4J238 MTND3P8-201ENST00000412909 339 ntBASIC-1.45□□□□□ -2.64
TRAV1-2A0A0B4J238 AF228730.3-201ENST00000436691 102 ntBASIC-1.45□□□□□ -2.64
TRAV1-2A0A0B4J238 AC023449.1-201ENST00000454464 154 ntBASIC-1.45□□□□□ -2.64
TRAV1-2A0A0B4J238 RNU5B-6P-201ENST00000516765 68 ntBASIC-1.45□□□□□ -2.64
TRAV1-2A0A0B4J238 MIR548AG2-201ENST00000581228 64 ntBASIC-1.45□□□□□ -2.64
TRAV1-2A0A0B4J238 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.45□□□□□ -2.64
TRAV1-2A0A0B4J238 Y_RNA.52-201ENST00000362760 96 ntBASIC-1.46□□□□□ -2.64
TRAV1-2A0A0B4J238 AL160004.2-201ENST00000432935 350 ntBASIC-1.46□□□□□ -2.64
TRAV1-2A0A0B4J238 AP003733.2-201ENST00000529409 171 ntBASIC-1.46□□□□□ -2.64
TRAV1-2A0A0B4J238 Y_RNA.757-201ENST00000578934 114 ntBASIC-1.46□□□□□ -2.64
TRAV1-2A0A0B4J238 MIR5704-201ENST00000584029 77 ntBASIC-1.46□□□□□ -2.64
TRAV1-2A0A0B4J238 RNU6-89P-201ENST00000606519 100 ntBASIC-1.46□□□□□ -2.64
TRAV1-2A0A0B4J238 AL021707.8-201ENST00000609428 183 ntBASIC-1.46□□□□□ -2.64
TRAV1-2A0A0B4J238 AC079248.2-201ENST00000623779 326 ntBASIC-1.46□□□□□ -2.64
TRAV1-2A0A0B4J238 Y_RNA.6-201ENST00000362350 114 ntBASIC-1.47□□□□□ -2.64
TRAV1-2A0A0B4J238 RNU6-888P-201ENST00000363010 101 ntBASIC-1.47□□□□□ -2.64
TRAV1-2A0A0B4J238 RNU6-626P-201ENST00000363354 107 ntBASIC-1.47□□□□□ -2.64
TRAV1-2A0A0B4J238 Y_RNA.410-201ENST00000383992 113 ntBASIC-1.47□□□□□ -2.64
TRAV1-2A0A0B4J238 RNU6-20P-201ENST00000384106 107 ntBASIC-1.47□□□□□ -2.64
TRAV1-2A0A0B4J238 RNU6-842P-201ENST00000384269 107 ntBASIC-1.47□□□□□ -2.64
TRAV1-2A0A0B4J238 RNU6-429P-201ENST00000384582 108 ntBASIC-1.47□□□□□ -2.64
TRAV1-2A0A0B4J238 MIR617-201ENST00000385030 97 ntBASIC-1.47□□□□□ -2.64
TRAV1-2A0A0B4J238 RNU2-14P-201ENST00000411053 191 ntBASIC-1.47□□□□□ -2.64
TRAV1-2A0A0B4J238 RNU7-141P-201ENST00000459304 62 ntBASIC-1.47□□□□□ -2.64
TRAV1-2A0A0B4J238 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC-1.47□□□□□ -2.64
TRAV1-2A0A0B4J238 MTCO2P4-201ENST00000517968 247 ntBASIC-1.47□□□□□ -2.64
TRAV1-2A0A0B4J238 ZNF519P2-201ENST00000557032 169 ntBASIC-1.47□□□□□ -2.64
TRAV1-2A0A0B4J238 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC-1.47□□□□□ -2.64
TRAV1-2A0A0B4J238 MIR3672-201ENST00000584290 82 ntBASIC-1.47□□□□□ -2.64
TRAV1-2A0A0B4J238 RN7SKP299-201ENST00000606679 301 ntBASIC-1.47□□□□□ -2.64
TRAV1-2A0A0B4J238 AC005014.2-201ENST00000607795 599 ntBASIC-1.47□□□□□ -2.64
TRAV1-2A0A0B4J238 Y_RNA.802-201ENST00000614892 130 ntBASIC-1.47□□□□□ -2.64
TRAV1-2A0A0B4J238 MIR6854-201ENST00000614935 69 ntBASIC-1.47□□□□□ -2.64
TRAV1-2A0A0B4J238 SNORA22.1-201ENST00000362701 134 ntBASIC-1.48□□□□□ -2.65
TRAV1-2A0A0B4J238 RNU6-1252P-201ENST00000363054 104 ntBASIC-1.48□□□□□ -2.65
TRAV1-2A0A0B4J238 RNU6-1059P-201ENST00000363752 98 ntBASIC-1.48□□□□□ -2.65
TRAV1-2A0A0B4J238 Y_RNA.178-201ENST00000363832 102 ntBASIC-1.48□□□□□ -2.65
TRAV1-2A0A0B4J238 Y_RNA.212-201ENST00000364177 102 ntBASIC-1.48□□□□□ -2.65
TRAV1-2A0A0B4J238 SNORD115-35-201ENST00000365122 82 ntBASIC-1.48□□□□□ -2.65
TRAV1-2A0A0B4J238 MIR122-201ENST00000385044 85 ntBASIC-1.48□□□□□ -2.65
TRAV1-2A0A0B4J238 HAR1A.1-201ENST00000459583 118 ntBASIC-1.48□□□□□ -2.65
TRAV1-2A0A0B4J238 Y_RNA.631-201ENST00000459607 101 ntBASIC-1.48□□□□□ -2.65
TRAV1-2A0A0B4J238 MIR2355-201ENST00000517199 87 ntBASIC-1.48□□□□□ -2.65
TRAV1-2A0A0B4J238 MIR4460-201ENST00000577862 86 ntBASIC-1.48□□□□□ -2.65
TRAV1-2A0A0B4J238 AC005357.1-201ENST00000588399 301 ntBASIC-1.48□□□□□ -2.65
TRAV1-2A0A0B4J238 AC027449.1-201ENST00000608890 407 ntBASIC-1.48□□□□□ -2.65
TRAV1-2A0A0B4J238 AC097520.1-201ENST00000624435 385 ntBASIC-1.48□□□□□ -2.65
TRAV1-2A0A0B4J238 Y_RNA.27-201ENST00000362540 103 ntBASIC-1.49□□□□□ -2.65
TRAV1-2A0A0B4J238 Y_RNA.201-201ENST00000364052 96 ntBASIC-1.49□□□□□ -2.65
TRAV1-2A0A0B4J238 Y_RNA.351-201ENST00000365436 96 ntBASIC-1.49□□□□□ -2.65
TRAV1-2A0A0B4J238 RNU6-1189P-201ENST00000383958 107 ntBASIC-1.49□□□□□ -2.65
TRAV1-2A0A0B4J238 Y_RNA.572-201ENST00000384757 98 ntBASIC-1.49□□□□□ -2.65
TRAV1-2A0A0B4J238 AL009048.1-201ENST00000450437 298 ntBASIC-1.49□□□□□ -2.65
TRAV1-2A0A0B4J238 MTND1P27-201ENST00000451117 902 ntBASIC-1.49□□□□□ -2.65
TRAV1-2A0A0B4J238 UBE2V1P12-201ENST00000503954 474 ntBASIC-1.49□□□□□ -2.65
TRAV1-2A0A0B4J238 MTND2P31-201ENST00000512602 616 ntBASIC-1.49□□□□□ -2.65
TRAV1-2A0A0B4J238 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-1.49□□□□□ -2.65
TRAV1-2A0A0B4J238 MIR8068-201ENST00000618032 68 ntBASIC-1.49□□□□□ -2.65
TRAV1-2A0A0B4J238 FGF7P2-201ENST00000332473 296 ntBASIC-1.5□□□□□ -2.65
TRAV1-2A0A0B4J238 Y_RNA.231-201ENST00000364358 102 ntBASIC-1.5□□□□□ -2.65
TRAV1-2A0A0B4J238 MTND2P14-201ENST00000482139 351 ntBASIC-1.5□□□□□ -2.65
TRAV1-2A0A0B4J238 RNA5SP476-201ENST00000516613 103 ntBASIC-1.5□□□□□ -2.65
TRAV1-2A0A0B4J238 RNU7-35P-201ENST00000517174 62 ntBASIC-1.5□□□□□ -2.65
TRAV1-2A0A0B4J238 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-1.5□□□□□ -2.65
TRAV1-2A0A0B4J238 MIR4662B-201ENST00000579498 81 ntBASIC-1.5□□□□□ -2.65
TRAV1-2A0A0B4J238 AC098479.1-201ENST00000609225 154 ntBASIC-1.5□□□□□ -2.65
TRAV1-2A0A0B4J238 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-1.5□□□□□ -2.65
TRAV1-2A0A0B4J238 U4.1-201ENST00000620349 87 ntBASIC-1.5□□□□□ -2.65
TRAV1-2A0A0B4J238 RNU4-80P-201ENST00000363200 141 ntBASIC-1.51□□□□□ -2.65
TRAV1-2A0A0B4J238 SNORD116-11-201ENST00000383882 92 ntBASIC-1.51□□□□□ -2.65
TRAV1-2A0A0B4J238 MIR519A1-201ENST00000385257 85 ntBASIC-1.51□□□□□ -2.65
TRAV1-2A0A0B4J238 MIR652-201ENST00000385278 98 ntBASIC-1.51□□□□□ -2.65
TRAV1-2A0A0B4J238 MTND2P39-201ENST00000457230 764 ntBASIC-1.51□□□□□ -2.65
TRAV1-2A0A0B4J238 SERF1AP1-201ENST00000514575 187 ntBASIC-1.51□□□□□ -2.65
TRAV1-2A0A0B4J238 SNORD77.4-201ENST00000516158 81 ntBASIC-1.51□□□□□ -2.65
TRAV1-2A0A0B4J238 RNU6-256P-201ENST00000516747 97 ntBASIC-1.51□□□□□ -2.65
TRAV1-2A0A0B4J238 RNU6-1270P-201ENST00000517128 108 ntBASIC-1.51□□□□□ -2.65
TRAV1-2A0A0B4J238 AC026421.1-201ENST00000519101 163 ntBASIC-1.51□□□□□ -2.65
TRAV1-2A0A0B4J238 AC100767.1-201ENST00000528178 123 ntBASIC-1.51□□□□□ -2.65
TRAV1-2A0A0B4J238 Y_RNA.121-201ENST00000363309 113 ntBASIC-1.52□□□□□ -2.65
TRAV1-2A0A0B4J238 Y_RNA.220-201ENST00000364244 109 ntBASIC-1.52□□□□□ -2.65
TRAV1-2A0A0B4J238 RNU4-28P-201ENST00000364739 141 ntBASIC-1.52□□□□□ -2.65
TRAV1-2A0A0B4J238 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.52□□□□□ -2.65
TRAV1-2A0A0B4J238 SNORA20-201ENST00000384662 132 ntBASIC-1.52□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms