| S4R3C0 | SENP7-207 | ENST00000394095 | 4945 nt | APPRIS P3 TSL 1 (best) BASIC | 0.4 | □□□□□ -2.35 | | |
| S4R3C0 | UBE2WP1-201 | ENST00000362030 | 340 nt | BASIC | 0.4 | □□□□□ -2.35 | | |
| S4R3C0 | Y_RNA.37-201 | ENST00000362606 | 108 nt | BASIC | 0.4 | □□□□□ -2.35 | | |
| S4R3C0 | Y_RNA.275-201 | ENST00000364726 | 110 nt | BASIC | 0.4 | □□□□□ -2.35 | | |
| S4R3C0 | IL6ST-202 | ENST00000381286 | 201 nt | TSL 1 (best) BASIC | 0.4 | □□□□□ -2.35 | | |
| S4R3C0 | SNORD61-201 | ENST00000384252 | 73 nt | BASIC | 0.4 | □□□□□ -2.35 | | |
| S4R3C0 | SNORA8.3-201 | ENST00000384679 | 139 nt | BASIC | 0.4 | □□□□□ -2.35 | | |
| S4R3C0 | MIR548A2-201 | ENST00000384956 | 97 nt | BASIC | 0.4 | □□□□□ -2.35 | | |
| S4R3C0 | RNU6-913P-201 | ENST00000390913 | 95 nt | BASIC | 0.4 | □□□□□ -2.35 | | |
| S4R3C0 | RNU6-985P-201 | ENST00000410182 | 104 nt | BASIC | 0.4 | □□□□□ -2.35 | | |
| S4R3C0 | RNA5SP222-201 | ENST00000411039 | 105 nt | BASIC | 0.4 | □□□□□ -2.35 | | |
| S4R3C0 | AC113618.1-201 | ENST00000416747 | 285 nt | BASIC | 0.4 | □□□□□ -2.35 | | |
| S4R3C0 | AC100767.1-201 | ENST00000528178 | 123 nt | BASIC | 0.4 | □□□□□ -2.35 | | |
| S4R3C0 | MIR4771-2-201 | ENST00000577758 | 74 nt | BASIC | 0.4 | □□□□□ -2.35 | | |
| S4R3C0 | MIR4771-1-201 | ENST00000582617 | 74 nt | BASIC | 0.4 | □□□□□ -2.35 | | |
| S4R3C0 | MIR4264-201 | ENST00000583520 | 66 nt | BASIC | 0.4 | □□□□□ -2.35 | | |
| S4R3C0 | MIR6513-201 | ENST00000621188 | 64 nt | BASIC | 0.4 | □□□□□ -2.35 | | |
| S4R3C0 | CEP57L1-213 | ENST00000520883 | 2055 nt | TSL 5 BASIC | 0.39 | □□□□□ -2.35 | | |
| S4R3C0 | CXADR-202 | ENST00000356275 | 270 nt | TSL 1 (best) BASIC | 0.39 | □□□□□ -2.35 | | |
| S4R3C0 | RNU6-934P-201 | ENST00000365154 | 107 nt | BASIC | 0.39 | □□□□□ -2.35 | | |
| S4R3C0 | RNU6-580P-201 | ENST00000365159 | 107 nt | BASIC | 0.39 | □□□□□ -2.35 | | |
| S4R3C0 | RNY1P8-201 | ENST00000383970 | 114 nt | BASIC | 0.39 | □□□□□ -2.35 | | |
| S4R3C0 | SNORA36.2-201 | ENST00000384004 | 127 nt | BASIC | 0.39 | □□□□□ -2.35 | | |
| S4R3C0 | RNU6-639P-201 | ENST00000384074 | 107 nt | BASIC | 0.39 | □□□□□ -2.35 | | |
| S4R3C0 | SNORA27-201 | ENST00000384323 | 126 nt | BASIC | 0.39 | □□□□□ -2.35 | | |
| S4R3C0 | Y_RNA.512-201 | ENST00000384518 | 102 nt | BASIC | 0.39 | □□□□□ -2.35 | | |
| S4R3C0 | RNU6-342P-201 | ENST00000384521 | 104 nt | BASIC | 0.39 | □□□□□ -2.35 | | |
| S4R3C0 | AC244023.1-201 | ENST00000426884 | 112 nt | BASIC | 0.39 | □□□□□ -2.35 | | |
| S4R3C0 | HMGN1P33-201 | ENST00000432945 | 451 nt | BASIC | 0.39 | □□□□□ -2.35 | | |
| S4R3C0 | MTCYBP6-201 | ENST00000441810 | 138 nt | BASIC | 0.39 | □□□□□ -2.35 | | |
| S4R3C0 | AC087499.4-201 | ENST00000448505 | 178 nt | BASIC | 0.39 | □□□□□ -2.35 | | |
| S4R3C0 | RNU7-62P-201 | ENST00000458856 | 62 nt | BASIC | 0.39 | □□□□□ -2.35 | | |
| S4R3C0 | RNU6-977P-201 | ENST00000516411 | 103 nt | BASIC | 0.39 | □□□□□ -2.35 | | |
| S4R3C0 | RNU6-365P-201 | ENST00000517113 | 106 nt | BASIC | 0.39 | □□□□□ -2.35 | | |
| S4R3C0 | AC242498.1-201 | ENST00000604134 | 111 nt | BASIC | 0.39 | □□□□□ -2.35 | | |
| S4R3C0 | uc_338.6-201 | ENST00000613544 | 171 nt | BASIC | 0.39 | □□□□□ -2.35 | | |
| S4R3C0 | MIR5087-201 | ENST00000635826 | 76 nt | BASIC | 0.39 | □□□□□ -2.35 | | |
| S4R3C0 | Y_RNA.44-201 | ENST00000362676 | 108 nt | BASIC | 0.38 | □□□□□ -2.35 | | |
| S4R3C0 | Y_RNA.91-201 | ENST00000363042 | 107 nt | BASIC | 0.38 | □□□□□ -2.35 | | |
| S4R3C0 | Y_RNA.237-201 | ENST00000364439 | 102 nt | BASIC | 0.38 | □□□□□ -2.35 | | |
| S4R3C0 | RNU6-740P-201 | ENST00000364734 | 105 nt | BASIC | 0.38 | □□□□□ -2.35 | | |
| S4R3C0 | SNORD24-201 | ENST00000383884 | 75 nt | BASIC | 0.38 | □□□□□ -2.35 | | |
| S4R3C0 | RNU6-945P-201 | ENST00000383947 | 107 nt | BASIC | 0.38 | □□□□□ -2.35 | | |
| S4R3C0 | MIR520F-201 | ENST00000384824 | 87 nt | BASIC | 0.38 | □□□□□ -2.35 | | |
| S4R3C0 | MIR626-201 | ENST00000385032 | 94 nt | BASIC | 0.38 | □□□□□ -2.35 | | |
| S4R3C0 | MIR520H-201 | ENST00000385126 | 88 nt | BASIC | 0.38 | □□□□□ -2.35 | | |
| S4R3C0 | MT-TT-201 | ENST00000387460 | 66 nt | BASIC | 0.38 | □□□□□ -2.35 | | |
| S4R3C0 | SNORA40.5-201 | ENST00000391061 | 128 nt | BASIC | 0.38 | □□□□□ -2.35 | | |
| S4R3C0 | RNU6-651P-201 | ENST00000411040 | 105 nt | BASIC | 0.38 | □□□□□ -2.35 | | |
| S4R3C0 | AL138752.1-201 | ENST00000452964 | 351 nt | BASIC | 0.38 | □□□□□ -2.35 | | |
| S4R3C0 | RNU6-1132P-201 | ENST00000459214 | 107 nt | BASIC | 0.38 | □□□□□ -2.35 | | |
| S4R3C0 | TRBVB-201 | ENST00000477100 | 408 nt | BASIC | 0.38 | □□□□□ -2.35 | | |
| S4R3C0 | AC044792.1-201 | ENST00000593294 | 196 nt | BASIC | 0.38 | □□□□□ -2.35 | | |
| S4R3C0 | AP001282.2-201 | ENST00000616149 | 309 nt | BASIC | 0.38 | □□□□□ -2.35 | | |
| S4R3C0 | KCNQ1OT1_5.1-201 | ENST00000621902 | 226 nt | BASIC | 0.38 | □□□□□ -2.35 | | |
| S4R3C0 | SAMD9-203 | ENST00000620985 | 6754 nt | APPRIS P1 TSL 2 BASIC | 0.37 | □□□□□ -2.35 | | |
| S4R3C0 | ZNF518A-209 | ENST00000614149 | 7911 nt | APPRIS P1 TSL 5 BASIC | 0.37 | □□□□□ -2.35 | | |
| S4R3C0 | RNU6-888P-201 | ENST00000363010 | 101 nt | BASIC | 0.37 | □□□□□ -2.35 | | |
| S4R3C0 | RNU6-713P-201 | ENST00000384761 | 107 nt | BASIC | 0.37 | □□□□□ -2.35 | | |
| S4R3C0 | MIR573-201 | ENST00000384964 | 99 nt | BASIC | 0.37 | □□□□□ -2.35 | | |
| S4R3C0 | RNU6ATAC6P-201 | ENST00000408132 | 126 nt | BASIC | 0.37 | □□□□□ -2.35 | | |
| S4R3C0 | RNU6-1190P-201 | ENST00000410811 | 104 nt | BASIC | 0.37 | □□□□□ -2.35 | | |
| S4R3C0 | Y_RNA.622-201 | ENST00000411091 | 108 nt | BASIC | 0.37 | □□□□□ -2.35 | | |
| S4R3C0 | AL353742.1-201 | ENST00000453455 | 224 nt | TSL 3 BASIC | 0.37 | □□□□□ -2.35 | | |
| S4R3C0 | RNU7-73P-201 | ENST00000458743 | 63 nt | BASIC | 0.37 | □□□□□ -2.35 | | |
| S4R3C0 | MTATP8P1-201 | ENST00000467115 | 207 nt | BASIC | 0.37 | □□□□□ -2.35 | | |
| S4R3C0 | RPS29P24-201 | ENST00000486345 | 171 nt | BASIC | 0.37 | □□□□□ -2.35 | | |
| S4R3C0 | AC068658.1-201 | ENST00000507509 | 388 nt | TSL 2 BASIC | 0.37 | □□□□□ -2.35 | | |
| S4R3C0 | RNA5SP436-201 | ENST00000516020 | 115 nt | BASIC | 0.37 | □□□□□ -2.35 | | |
| S4R3C0 | MIR6740-201 | ENST00000618268 | 113 nt | BASIC | 0.37 | □□□□□ -2.35 | | |
| S4R3C0 | AC010332.2-201 | ENST00000613083 | 1904 nt | BASIC | 0.36 | □□□□□ -2.35 | | |
| S4R3C0 | EVI2B-201 | ENST00000330927 | 1999 nt | APPRIS P1 TSL 1 (best) BASIC | 0.36 | □□□□□ -2.35 | | |
| S4R3C0 | AP003174.1-201 | ENST00000306533 | 376 nt | TSL 2 BASIC | 0.36 | □□□□□ -2.35 | | |
| S4R3C0 | MIR342-201 | ENST00000362212 | 99 nt | BASIC | 0.36 | □□□□□ -2.35 | | |
| S4R3C0 | Y_RNA.7-201 | ENST00000362352 | 102 nt | BASIC | 0.36 | □□□□□ -2.35 | | |
| S4R3C0 | Y_RNA.66-201 | ENST00000362862 | 102 nt | BASIC | 0.36 | □□□□□ -2.35 | | |
| S4R3C0 | RNU6-484P-201 | ENST00000384016 | 107 nt | BASIC | 0.36 | □□□□□ -2.35 | | |
| S4R3C0 | SNORD38B-201 | ENST00000384690 | 67 nt | BASIC | 0.36 | □□□□□ -2.35 | | |
| S4R3C0 | MIR216A-201 | ENST00000385063 | 110 nt | BASIC | 0.36 | □□□□□ -2.35 | | |
| S4R3C0 | RNU2-70P-201 | ENST00000410718 | 179 nt | BASIC | 0.36 | □□□□□ -2.35 | | |
| S4R3C0 | AC114737.2-201 | ENST00000421583 | 173 nt | BASIC | 0.36 | □□□□□ -2.35 | | |
| S4R3C0 | AF228730.3-201 | ENST00000436691 | 102 nt | BASIC | 0.36 | □□□□□ -2.35 | | |
| S4R3C0 | RNU6-1299P-201 | ENST00000516316 | 100 nt | BASIC | 0.36 | □□□□□ -2.35 | | |
| S4R3C0 | RNU4-54P-201 | ENST00000516428 | 129 nt | BASIC | 0.36 | □□□□□ -2.35 | | |
| S4R3C0 | RNU6-504P-201 | ENST00000516568 | 104 nt | BASIC | 0.36 | □□□□□ -2.35 | | |
| S4R3C0 | RNU6-635P-201 | ENST00000516651 | 102 nt | BASIC | 0.36 | □□□□□ -2.35 | | |
| S4R3C0 | RNU6-126P-201 | ENST00000516685 | 103 nt | BASIC | 0.36 | □□□□□ -2.35 | | |
| S4R3C0 | RNU7-53P-201 | ENST00000516705 | 60 nt | BASIC | 0.36 | □□□□□ -2.35 | | |
| S4R3C0 | RNU6-453P-201 | ENST00000516819 | 85 nt | BASIC | 0.36 | □□□□□ -2.35 | | |
| S4R3C0 | MIR5688-201 | ENST00000580619 | 83 nt | BASIC | 0.36 | □□□□□ -2.35 | | |
| S4R3C0 | AC015818.4-201 | ENST00000580931 | 353 nt | TSL 5 BASIC | 0.36 | □□□□□ -2.35 | | |
| S4R3C0 | AC020891.4-201 | ENST00000605745 | 93 nt | BASIC | 0.36 | □□□□□ -2.35 | | |
| S4R3C0 | U2.14-201 | ENST00000615943 | 113 nt | BASIC | 0.36 | □□□□□ -2.35 | | |
| S4R3C0 | PVT1_3.1-201 | ENST00000620853 | 95 nt | BASIC | 0.36 | □□□□□ -2.35 | | |
| S4R3C0 | SNORD38B-202 | ENST00000625943 | 69 nt | BASIC | 0.36 | □□□□□ -2.35 | | |
| S4R3C0 | HECTD2-202 | ENST00000371667 | 4354 nt | TSL 1 (best) BASIC | 0.36 | □□□□□ -2.35 | | |
| S4R3C0 | ZBTB41-201 | ENST00000367405 | 8478 nt | APPRIS P1 TSL 1 (best) BASIC | 0.35 | □□□□□ -2.35 | | |
| S4R3C0 | Y_RNA.36-201 | ENST00000362602 | 112 nt | BASIC | 0.35 | □□□□□ -2.35 | | |
| S4R3C0 | RNU6-1309P-201 | ENST00000363305 | 108 nt | BASIC | 0.35 | □□□□□ -2.35 | | |
| S4R3C0 | RNU6-238P-201 | ENST00000363313 | 106 nt | BASIC | 0.35 | □□□□□ -2.35 | | |