Protein–RNA interactions for Protein: Q9Y5X4

NR2E3, Photoreceptor-specific nuclear receptor, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR2E3Q9Y5X4 AC090142.3-201ENST00000519012 385 ntBASIC1.93□□□□□ -2.1
NR2E3Q9Y5X4 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.93□□□□□ -2.1
NR2E3Q9Y5X4 AC091895.1-201ENST00000624494 256 ntBASIC1.93□□□□□ -2.1
NR2E3Q9Y5X4 AC095038.3-201ENST00000634439 195 ntBASIC1.93□□□□□ -2.1
NR2E3Q9Y5X4 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.93□□□□□ -2.1
NR2E3Q9Y5X4 Y_RNA.280-201ENST00000364765 112 ntBASIC1.92□□□□□ -2.1
NR2E3Q9Y5X4 RNU6-1292P-201ENST00000383856 107 ntBASIC1.92□□□□□ -2.1
NR2E3Q9Y5X4 RNU6-938P-201ENST00000411285 103 ntBASIC1.92□□□□□ -2.1
NR2E3Q9Y5X4 MIR3122-201ENST00000577243 73 ntBASIC1.92□□□□□ -2.1
NR2E3Q9Y5X4 MIR3198-2-201ENST00000577868 80 ntBASIC1.92□□□□□ -2.1
NR2E3Q9Y5X4 AC131055.1-201ENST00000584626 316 ntBASIC1.92□□□□□ -2.1
NR2E3Q9Y5X4 AL157834.3-201ENST00000615543 103 ntBASIC1.92□□□□□ -2.1
NR2E3Q9Y5X4 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.91□□□□□ -2.1
NR2E3Q9Y5X4 Y_RNA.52-201ENST00000362760 96 ntBASIC1.91□□□□□ -2.1
NR2E3Q9Y5X4 RNU6-915P-201ENST00000364943 103 ntBASIC1.91□□□□□ -2.1
NR2E3Q9Y5X4 RNU6-342P-201ENST00000384521 104 ntBASIC1.91□□□□□ -2.1
NR2E3Q9Y5X4 Y_RNA.547-201ENST00000384654 119 ntBASIC1.91□□□□□ -2.1
NR2E3Q9Y5X4 Y_RNA.584-201ENST00000391090 114 ntBASIC1.91□□□□□ -2.1
NR2E3Q9Y5X4 MIR548O-201ENST00000408583 114 ntBASIC1.91□□□□□ -2.1
NR2E3Q9Y5X4 RNA5SP127-201ENST00000411051 133 ntBASIC1.91□□□□□ -2.1
NR2E3Q9Y5X4 RNA5SP236-201ENST00000516169 116 ntBASIC1.91□□□□□ -2.1
NR2E3Q9Y5X4 SCARNA15-202ENST00000516881 127 ntBASIC1.91□□□□□ -2.1
NR2E3Q9Y5X4 AC022709.1-201ENST00000615967 87 ntBASIC1.91□□□□□ -2.1
NR2E3Q9Y5X4 Y_RNA.374-201ENST00000365606 101 ntBASIC1.9□□□□□ -2.11
NR2E3Q9Y5X4 RNU6-22P-201ENST00000384355 107 ntBASIC1.9□□□□□ -2.11
NR2E3Q9Y5X4 MIR452-201ENST00000385020 85 ntBASIC1.9□□□□□ -2.11
NR2E3Q9Y5X4 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.9□□□□□ -2.11
NR2E3Q9Y5X4 MIR4778-201ENST00000577635 80 ntBASIC1.9□□□□□ -2.11
NR2E3Q9Y5X4 AL365222.1-201ENST00000614661 98 ntBASIC1.9□□□□□ -2.11
NR2E3Q9Y5X4 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.9□□□□□ -2.11
NR2E3Q9Y5X4 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
NR2E3Q9Y5X4 MTND5P32-201ENST00000560711 1802 ntBASIC1.89□□□□□ -2.11
NR2E3Q9Y5X4 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.89□□□□□ -2.11
NR2E3Q9Y5X4 Y_RNA.120-201ENST00000363304 110 ntBASIC1.89□□□□□ -2.11
NR2E3Q9Y5X4 RNU1-42P-201ENST00000364033 160 ntBASIC1.89□□□□□ -2.11
NR2E3Q9Y5X4 Y_RNA.291-201ENST00000364886 113 ntBASIC1.89□□□□□ -2.11
NR2E3Q9Y5X4 Y_RNA.294-201ENST00000364916 102 ntBASIC1.89□□□□□ -2.11
NR2E3Q9Y5X4 MIR513A1-201ENST00000385138 129 ntBASIC1.89□□□□□ -2.11
NR2E3Q9Y5X4 snoU13.9-201ENST00000458927 103 ntBASIC1.89□□□□□ -2.11
NR2E3Q9Y5X4 RNU4-57P-201ENST00000515980 135 ntBASIC1.89□□□□□ -2.11
NR2E3Q9Y5X4 AP001328.1-201ENST00000528550 176 ntBASIC1.89□□□□□ -2.11
NR2E3Q9Y5X4 AC015688.6-201ENST00000577737 104 ntBASIC1.89□□□□□ -2.11
NR2E3Q9Y5X4 Y_RNA.71-201ENST00000362892 104 ntBASIC1.88□□□□□ -2.11
NR2E3Q9Y5X4 RNU6-60P-201ENST00000364792 103 ntBASIC1.88□□□□□ -2.11
NR2E3Q9Y5X4 RNU6-1117P-201ENST00000384525 104 ntBASIC1.88□□□□□ -2.11
NR2E3Q9Y5X4 RPL31P63-201ENST00000422565 375 ntBASIC1.88□□□□□ -2.11
NR2E3Q9Y5X4 AC093850.1-201ENST00000454121 251 ntBASIC1.88□□□□□ -2.11
NR2E3Q9Y5X4 Y_RNA.651-201ENST00000459380 103 ntBASIC1.88□□□□□ -2.11
NR2E3Q9Y5X4 RNU6-1234P-201ENST00000516877 103 ntBASIC1.88□□□□□ -2.11
NR2E3Q9Y5X4 RNU1-92P-201ENST00000517017 135 ntBASIC1.88□□□□□ -2.11
NR2E3Q9Y5X4 SUMO2P16-201ENST00000519475 264 ntBASIC1.88□□□□□ -2.11
NR2E3Q9Y5X4 MIR4285-201ENST00000581001 85 ntBASIC1.88□□□□□ -2.11
NR2E3Q9Y5X4 Y_RNA.37-201ENST00000362606 108 ntBASIC1.87□□□□□ -2.11
NR2E3Q9Y5X4 RNU6-309P-201ENST00000364573 106 ntBASIC1.87□□□□□ -2.11
NR2E3Q9Y5X4 SNORA16.1-201ENST00000364597 132 ntBASIC1.87□□□□□ -2.11
NR2E3Q9Y5X4 ICE2P2-201ENST00000483823 2787 ntBASIC1.87□□□□□ -2.11
NR2E3Q9Y5X4 AC008834.1-201ENST00000511612 175 ntBASIC1.87□□□□□ -2.11
NR2E3Q9Y5X4 RNU6-479P-201ENST00000516348 105 ntBASIC1.87□□□□□ -2.11
NR2E3Q9Y5X4 RNU6-830P-201ENST00000516353 107 ntBASIC1.87□□□□□ -2.11
NR2E3Q9Y5X4 SNORA18.4-201ENST00000516440 124 ntBASIC1.87□□□□□ -2.11
NR2E3Q9Y5X4 SNORD36C-201ENST00000516733 66 ntBASIC1.87□□□□□ -2.11
NR2E3Q9Y5X4 MIR3121-201ENST00000579680 77 ntBASIC1.87□□□□□ -2.11
NR2E3Q9Y5X4 MIR5197-201ENST00000583721 112 ntBASIC1.87□□□□□ -2.11
NR2E3Q9Y5X4 AL645939.4-201ENST00000604495 135 ntBASIC1.87□□□□□ -2.11
NR2E3Q9Y5X4 U7.2-201ENST00000607576 63 ntBASIC1.87□□□□□ -2.11
NR2E3Q9Y5X4 TUG1_4.1-201ENST00000619464 181 ntBASIC1.87□□□□□ -2.11
NR2E3Q9Y5X4 ZNF209P-201ENST00000593450 2304 ntBASIC1.86□□□□□ -2.11
NR2E3Q9Y5X4 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
NR2E3Q9Y5X4 SNORD115-28-201ENST00000363931 81 ntBASIC1.86□□□□□ -2.11
NR2E3Q9Y5X4 Y_RNA.261-201ENST00000364631 102 ntBASIC1.86□□□□□ -2.11
NR2E3Q9Y5X4 RNA5SP259-201ENST00000365541 109 ntBASIC1.86□□□□□ -2.11
NR2E3Q9Y5X4 SNORD38C-201ENST00000384381 69 ntBASIC1.86□□□□□ -2.11
NR2E3Q9Y5X4 MIR526A1-201ENST00000384897 85 ntBASIC1.86□□□□□ -2.11
NR2E3Q9Y5X4 RNU6-1168P-201ENST00000390831 104 ntBASIC1.86□□□□□ -2.11
NR2E3Q9Y5X4 SNORA67.6-201ENST00000391093 99 ntBASIC1.86□□□□□ -2.11
NR2E3Q9Y5X4 AL603914.1-201ENST00000401964 204 ntBASIC1.86□□□□□ -2.11
NR2E3Q9Y5X4 RNU6-1211P-201ENST00000459179 105 ntBASIC1.86□□□□□ -2.11
NR2E3Q9Y5X4 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.86□□□□□ -2.11
NR2E3Q9Y5X4 MIR4421-201ENST00000578133 69 ntBASIC1.86□□□□□ -2.11
NR2E3Q9Y5X4 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.86□□□□□ -2.11
NR2E3Q9Y5X4 PVT1_3.1-201ENST00000620853 95 ntBASIC1.86□□□□□ -2.11
NR2E3Q9Y5X4 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
NR2E3Q9Y5X4 SNORA22C-201ENST00000384614 134 ntBASIC1.85□□□□□ -2.11
NR2E3Q9Y5X4 AC015922.2-201ENST00000435593 184 ntBASIC1.85□□□□□ -2.11
NR2E3Q9Y5X4 AC005908.1-201ENST00000468701 347 ntBASIC1.85□□□□□ -2.11
NR2E3Q9Y5X4 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.85□□□□□ -2.11
NR2E3Q9Y5X4 RNU6-1149P-201ENST00000516810 97 ntBASIC1.85□□□□□ -2.11
NR2E3Q9Y5X4 MIR4419B-201ENST00000577260 68 ntBASIC1.85□□□□□ -2.11
NR2E3Q9Y5X4 AC134878.1-201ENST00000619901 243 ntBASIC1.85□□□□□ -2.11
NR2E3Q9Y5X4 Y_RNA.127-201ENST00000363386 109 ntBASIC1.84□□□□□ -2.11
NR2E3Q9Y5X4 SNORD116-14-201ENST00000383894 92 ntBASIC1.84□□□□□ -2.11
NR2E3Q9Y5X4 SNORD116-17-201ENST00000383929 92 ntBASIC1.84□□□□□ -2.11
NR2E3Q9Y5X4 Y_RNA.494-201ENST00000384432 111 ntBASIC1.84□□□□□ -2.11
NR2E3Q9Y5X4 SNORD116-15-201ENST00000384445 92 ntBASIC1.84□□□□□ -2.11
NR2E3Q9Y5X4 Y_RNA.525-201ENST00000384570 113 ntBASIC1.84□□□□□ -2.11
NR2E3Q9Y5X4 SNORD116-19-201ENST00000384729 92 ntBASIC1.84□□□□□ -2.11
NR2E3Q9Y5X4 MIR598-201ENST00000384868 97 ntBASIC1.84□□□□□ -2.11
NR2E3Q9Y5X4 HSPE1P24-201ENST00000450782 238 ntBASIC1.84□□□□□ -2.11
NR2E3Q9Y5X4 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.84□□□□□ -2.11
NR2E3Q9Y5X4 AC015726.2-201ENST00000620112 122 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 316.2 ms