Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 RNU6-652P-201ENST00000365488 107 ntBASIC-0.36□□□□□ -2.47
HHLA3Q9XRX5 MIR329-2-201ENST00000385029 84 ntBASIC-0.36□□□□□ -2.47
HHLA3Q9XRX5 MIR501-201ENST00000390204 84 ntBASIC-0.36□□□□□ -2.47
HHLA3Q9XRX5 RNA5SP163-201ENST00000410304 99 ntBASIC-0.36□□□□□ -2.47
HHLA3Q9XRX5 RNU6-370P-201ENST00000411008 104 ntBASIC-0.36□□□□□ -2.47
HHLA3Q9XRX5 AL160004.2-201ENST00000432935 350 ntBASIC-0.36□□□□□ -2.47
HHLA3Q9XRX5 RPL39P25-201ENST00000449384 154 ntBASIC-0.36□□□□□ -2.47
HHLA3Q9XRX5 SNORD4A-201ENST00000459174 72 ntBASIC-0.36□□□□□ -2.47
HHLA3Q9XRX5 RNU7-96P-201ENST00000459535 64 ntBASIC-0.36□□□□□ -2.47
HHLA3Q9XRX5 RNU7-30P-201ENST00000516835 62 ntBASIC-0.36□□□□□ -2.47
HHLA3Q9XRX5 AC026407.1-201ENST00000518369 204 ntBASIC-0.36□□□□□ -2.47
HHLA3Q9XRX5 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-0.36□□□□□ -2.47
HHLA3Q9XRX5 MIR6717-201ENST00000622747 73 ntBASIC-0.36□□□□□ -2.47
HHLA3Q9XRX5 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.37□□□□□ -2.47
HHLA3Q9XRX5 Y_RNA.383-201ENST00000383855 97 ntBASIC-0.37□□□□□ -2.47
HHLA3Q9XRX5 SNORD61-201ENST00000384252 73 ntBASIC-0.37□□□□□ -2.47
HHLA3Q9XRX5 Y_RNA.539-201ENST00000384635 107 ntBASIC-0.37□□□□□ -2.47
HHLA3Q9XRX5 RNU6-535P-201ENST00000384722 107 ntBASIC-0.37□□□□□ -2.47
HHLA3Q9XRX5 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.37□□□□□ -2.47
HHLA3Q9XRX5 PDCL2P1-201ENST00000419302 352 ntBASIC-0.37□□□□□ -2.47
HHLA3Q9XRX5 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-0.37□□□□□ -2.47
HHLA3Q9XRX5 RNU7-45P-201ENST00000459460 63 ntBASIC-0.37□□□□□ -2.47
HHLA3Q9XRX5 RNU6-899P-201ENST00000363947 107 ntBASIC-0.38□□□□□ -2.47
HHLA3Q9XRX5 Y_RNA.813-201ENST00000364639 102 ntBASIC-0.38□□□□□ -2.47
HHLA3Q9XRX5 RNU6-144P-201ENST00000383951 107 ntBASIC-0.38□□□□□ -2.47
HHLA3Q9XRX5 Y_RNA.412-201ENST00000384001 104 ntBASIC-0.38□□□□□ -2.47
HHLA3Q9XRX5 Y_RNA.458-201ENST00000384240 102 ntBASIC-0.38□□□□□ -2.47
HHLA3Q9XRX5 RNU6-937P-201ENST00000384325 106 ntBASIC-0.38□□□□□ -2.47
HHLA3Q9XRX5 MIR7-2-201ENST00000384970 110 ntBASIC-0.38□□□□□ -2.47
HHLA3Q9XRX5 RNA5SP237-201ENST00000410414 113 ntBASIC-0.38□□□□□ -2.47
HHLA3Q9XRX5 SNORD77.4-201ENST00000516158 81 ntBASIC-0.38□□□□□ -2.47
HHLA3Q9XRX5 RNU6-320P-201ENST00000516511 106 ntBASIC-0.38□□□□□ -2.47
HHLA3Q9XRX5 Y_RNA.697-201ENST00000516776 113 ntBASIC-0.38□□□□□ -2.47
HHLA3Q9XRX5 VN1R91P-201ENST00000594377 169 ntBASIC-0.38□□□□□ -2.47
HHLA3Q9XRX5 Y_RNA.772-201ENST00000606692 102 ntBASIC-0.38□□□□□ -2.47
HHLA3Q9XRX5 U4.5-201ENST00000617137 123 ntBASIC-0.38□□□□□ -2.47
HHLA3Q9XRX5 RNA5SP257-201ENST00000363023 116 ntBASIC-0.39□□□□□ -2.47
HHLA3Q9XRX5 SNORA18.1-201ENST00000363418 128 ntBASIC-0.39□□□□□ -2.47
HHLA3Q9XRX5 RNU6-1205P-201ENST00000363625 106 ntBASIC-0.39□□□□□ -2.47
HHLA3Q9XRX5 RNU4-24P-201ENST00000364565 139 ntBASIC-0.39□□□□□ -2.47
HHLA3Q9XRX5 Y_RNA.286-201ENST00000364813 102 ntBASIC-0.39□□□□□ -2.47
HHLA3Q9XRX5 SNORD114-12-201ENST00000365400 75 ntBASIC-0.39□□□□□ -2.47
HHLA3Q9XRX5 SNORD24-201ENST00000383884 75 ntBASIC-0.39□□□□□ -2.47
HHLA3Q9XRX5 SNORA72.6-201ENST00000384520 129 ntBASIC-0.39□□□□□ -2.47
HHLA3Q9XRX5 MIR559-201ENST00000385188 96 ntBASIC-0.39□□□□□ -2.47
HHLA3Q9XRX5 AF228730.3-201ENST00000436691 102 ntBASIC-0.39□□□□□ -2.47
HHLA3Q9XRX5 RNU6-180P-201ENST00000516697 61 ntBASIC-0.39□□□□□ -2.47
HHLA3Q9XRX5 RNU6-1270P-201ENST00000517128 108 ntBASIC-0.39□□□□□ -2.47
HHLA3Q9XRX5 MIR548AD-201ENST00000584780 82 ntBASIC-0.39□□□□□ -2.47
HHLA3Q9XRX5 AC092447.9-201ENST00000603395 144 ntBASIC-0.39□□□□□ -2.47
HHLA3Q9XRX5 MIR342-201ENST00000362212 99 ntBASIC-0.4□□□□□ -2.47
HHLA3Q9XRX5 RNU6-888P-201ENST00000363010 101 ntBASIC-0.4□□□□□ -2.47
HHLA3Q9XRX5 RNU6-653P-201ENST00000363074 106 ntBASIC-0.4□□□□□ -2.47
HHLA3Q9XRX5 RNA5SP245-201ENST00000364239 121 ntBASIC-0.4□□□□□ -2.47
HHLA3Q9XRX5 Y_RNA.440-201ENST00000384120 114 ntBASIC-0.4□□□□□ -2.47
HHLA3Q9XRX5 SNORD63-201ENST00000384262 68 ntBASIC-0.4□□□□□ -2.47
HHLA3Q9XRX5 SNORD116-2-201ENST00000384274 95 ntBASIC-0.4□□□□□ -2.47
HHLA3Q9XRX5 Y_RNA.516-201ENST00000384541 124 ntBASIC-0.4□□□□□ -2.47
HHLA3Q9XRX5 RNU6-21P-201ENST00000384710 107 ntBASIC-0.4□□□□□ -2.47
HHLA3Q9XRX5 SNORD116-6-201ENST00000384711 96 ntBASIC-0.4□□□□□ -2.47
HHLA3Q9XRX5 RNU6-763P-201ENST00000390865 106 ntBASIC-0.4□□□□□ -2.47
HHLA3Q9XRX5 MIR548F1-201ENST00000408667 84 ntBASIC-0.4□□□□□ -2.47
HHLA3Q9XRX5 MTND1P34-201ENST00000438556 671 ntBASIC-0.4□□□□□ -2.47
HHLA3Q9XRX5 Y_RNA.635-201ENST00000459041 101 ntBASIC-0.4□□□□□ -2.47
HHLA3Q9XRX5 AC069439.1-201ENST00000494739 167 ntBASIC-0.4□□□□□ -2.47
HHLA3Q9XRX5 RNU6-191P-201ENST00000516295 94 ntBASIC-0.4□□□□□ -2.47
HHLA3Q9XRX5 Y_RNA.691-201ENST00000516611 103 ntBASIC-0.4□□□□□ -2.47
HHLA3Q9XRX5 SNORA25.16-201ENST00000516741 121 ntBASIC-0.4□□□□□ -2.47
HHLA3Q9XRX5 AC141846.1-201ENST00000568348 142 ntBASIC-0.4□□□□□ -2.47
HHLA3Q9XRX5 MIR4662B-201ENST00000579498 81 ntBASIC-0.4□□□□□ -2.47
HHLA3Q9XRX5 MIR5690-201ENST00000583739 73 ntBASIC-0.4□□□□□ -2.47
HHLA3Q9XRX5 AL670379.3-201ENST00000605040 251 ntBASIC-0.4□□□□□ -2.47
HHLA3Q9XRX5 SNORA70.25-201ENST00000612741 95 ntBASIC-0.4□□□□□ -2.47
HHLA3Q9XRX5 AC002553.4-201ENST00000616896 331 ntBASIC-0.4□□□□□ -2.47
HHLA3Q9XRX5 Y_RNA.3-201ENST00000362331 103 ntBASIC-0.41□□□□□ -2.48
HHLA3Q9XRX5 AC108059.2-201ENST00000434626 151 ntBASIC-0.41□□□□□ -2.48
HHLA3Q9XRX5 AC099799.1-201ENST00000439809 192 ntBASIC-0.41□□□□□ -2.48
HHLA3Q9XRX5 Y_RNA.631-201ENST00000459607 101 ntBASIC-0.41□□□□□ -2.48
HHLA3Q9XRX5 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.41□□□□□ -2.48
HHLA3Q9XRX5 RNU6-699P-201ENST00000517081 110 ntBASIC-0.41□□□□□ -2.48
HHLA3Q9XRX5 AC100767.1-201ENST00000528178 123 ntBASIC-0.41□□□□□ -2.48
HHLA3Q9XRX5 MIR3925-201ENST00000584674 77 ntBASIC-0.41□□□□□ -2.48
HHLA3Q9XRX5 MIR4272-201ENST00000635924 64 ntBASIC-0.41□□□□□ -2.48
HHLA3Q9XRX5 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC-0.41□□□□□ -2.48
HHLA3Q9XRX5 RNU6-490P-201ENST00000362985 107 ntBASIC-0.42□□□□□ -2.48
HHLA3Q9XRX5 MIR106A-201ENST00000384870 81 ntBASIC-0.42□□□□□ -2.48
HHLA3Q9XRX5 RNU6-1248P-201ENST00000391096 64 ntBASIC-0.42□□□□□ -2.48
HHLA3Q9XRX5 MIR1277-201ENST00000408536 78 ntBASIC-0.42□□□□□ -2.48
HHLA3Q9XRX5 RNU6-1203P-201ENST00000410703 110 ntBASIC-0.42□□□□□ -2.48
HHLA3Q9XRX5 RNU6-720P-201ENST00000516363 108 ntBASIC-0.42□□□□□ -2.48
HHLA3Q9XRX5 DLEU2_2.2-201ENST00000615474 90 ntBASIC-0.42□□□□□ -2.48
HHLA3Q9XRX5 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.42□□□□□ -2.48
HHLA3Q9XRX5 Y_RNA.14-201ENST00000362415 103 ntBASIC-0.43□□□□□ -2.48
HHLA3Q9XRX5 Y_RNA.143-201ENST00000363520 106 ntBASIC-0.43□□□□□ -2.48
HHLA3Q9XRX5 RNU6-726P-201ENST00000364680 107 ntBASIC-0.43□□□□□ -2.48
HHLA3Q9XRX5 RNY3-201ENST00000365484 102 ntBASIC-0.43□□□□□ -2.48
HHLA3Q9XRX5 Y_RNA.418-201ENST00000384029 102 ntBASIC-0.43□□□□□ -2.48
HHLA3Q9XRX5 RNU6-949P-201ENST00000384040 107 ntBASIC-0.43□□□□□ -2.48
HHLA3Q9XRX5 Y_RNA.637-201ENST00000459424 114 ntBASIC-0.43□□□□□ -2.48
HHLA3Q9XRX5 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-0.43□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 135.9 ms