Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 RNU6-635P-201ENST00000516651 102 ntBASIC1.34□□□□□ -2.19
SHROOM4Q9ULL8 AL627230.5-201ENST00000619807 58 ntBASIC1.34□□□□□ -2.19
SHROOM4Q9ULL8 Y_RNA.241-201ENST00000364470 117 ntBASIC1.33□□□□□ -2.2
SHROOM4Q9ULL8 RNU6-613P-201ENST00000410412 108 ntBASIC1.33□□□□□ -2.2
SHROOM4Q9ULL8 MIR335-201ENST00000362173 94 ntBASIC1.32□□□□□ -2.2
SHROOM4Q9ULL8 RNU6-238P-201ENST00000363313 106 ntBASIC1.32□□□□□ -2.2
SHROOM4Q9ULL8 RNU4-10P-201ENST00000364383 140 ntBASIC1.32□□□□□ -2.2
SHROOM4Q9ULL8 Y_RNA.376-201ENST00000365638 108 ntBASIC1.32□□□□□ -2.2
SHROOM4Q9ULL8 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.32□□□□□ -2.2
SHROOM4Q9ULL8 AC092628.1-201ENST00000436250 252 ntBASIC1.32□□□□□ -2.2
SHROOM4Q9ULL8 MIR548AO-201ENST00000579992 96 ntBASIC1.32□□□□□ -2.2
SHROOM4Q9ULL8 AP000753.3-201ENST00000604083 169 ntBASIC1.32□□□□□ -2.2
SHROOM4Q9ULL8 RNA5SP499-201ENST00000363982 119 ntBASIC1.31□□□□□ -2.2
SHROOM4Q9ULL8 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.31□□□□□ -2.2
SHROOM4Q9ULL8 AC113410.1-201ENST00000505029 247 ntBASIC1.31□□□□□ -2.2
SHROOM4Q9ULL8 SNORD115-34-201ENST00000362441 82 ntBASIC1.31□□□□□ -2.2
SHROOM4Q9ULL8 SNORD115-12-201ENST00000362583 82 ntBASIC1.31□□□□□ -2.2
SHROOM4Q9ULL8 SNORD115-29-201ENST00000362834 82 ntBASIC1.31□□□□□ -2.2
SHROOM4Q9ULL8 SNORD115-9-201ENST00000362912 82 ntBASIC1.31□□□□□ -2.2
SHROOM4Q9ULL8 SNORD115-21-201ENST00000362963 81 ntBASIC1.31□□□□□ -2.2
SHROOM4Q9ULL8 SNORD115-14-201ENST00000363090 81 ntBASIC1.31□□□□□ -2.2
SHROOM4Q9ULL8 SNORD115-13-201ENST00000363358 82 ntBASIC1.31□□□□□ -2.2
SHROOM4Q9ULL8 SNORD115-41-201ENST00000363608 82 ntBASIC1.31□□□□□ -2.2
SHROOM4Q9ULL8 SNORD115-11-201ENST00000363616 82 ntBASIC1.31□□□□□ -2.2
SHROOM4Q9ULL8 SNORD115-5-201ENST00000363633 82 ntBASIC1.31□□□□□ -2.2
SHROOM4Q9ULL8 SNORD115-39-201ENST00000363694 82 ntBASIC1.31□□□□□ -2.2
SHROOM4Q9ULL8 SNORD115-4-201ENST00000363810 82 ntBASIC1.31□□□□□ -2.2
SHROOM4Q9ULL8 SNORD115-16-201ENST00000363887 82 ntBASIC1.31□□□□□ -2.2
SHROOM4Q9ULL8 SNORD115-6-201ENST00000363942 82 ntBASIC1.31□□□□□ -2.2
SHROOM4Q9ULL8 SNORD115-42-201ENST00000364273 82 ntBASIC1.31□□□□□ -2.2
SHROOM4Q9ULL8 SNORD115-15-201ENST00000364809 81 ntBASIC1.31□□□□□ -2.2
SHROOM4Q9ULL8 SNORD115-1-201ENST00000364961 82 ntBASIC1.31□□□□□ -2.2
SHROOM4Q9ULL8 SNORD115-26-201ENST00000365067 82 ntBASIC1.31□□□□□ -2.2
SHROOM4Q9ULL8 SNORD115-10-201ENST00000365073 81 ntBASIC1.31□□□□□ -2.2
SHROOM4Q9ULL8 SNORD115-43-201ENST00000365503 82 ntBASIC1.31□□□□□ -2.2
SHROOM4Q9ULL8 SNORD115-36-201ENST00000365629 82 ntBASIC1.31□□□□□ -2.2
SHROOM4Q9ULL8 SNORA22-201ENST00000383907 134 ntBASIC1.31□□□□□ -2.2
SHROOM4Q9ULL8 RNY3P5-201ENST00000384127 102 ntBASIC1.31□□□□□ -2.2
SHROOM4Q9ULL8 SNORA22C-201ENST00000384614 134 ntBASIC1.31□□□□□ -2.2
SHROOM4Q9ULL8 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.31□□□□□ -2.2
SHROOM4Q9ULL8 RNU6-197P-201ENST00000516680 100 ntBASIC1.31□□□□□ -2.2
SHROOM4Q9ULL8 RNU6-958P-201ENST00000516995 106 ntBASIC1.31□□□□□ -2.2
SHROOM4Q9ULL8 SNORD115-40-201ENST00000606510 82 ntBASIC1.31□□□□□ -2.2
SHROOM4Q9ULL8 AC134878.1-201ENST00000619901 243 ntBASIC1.31□□□□□ -2.2
SHROOM4Q9ULL8 AC243829.3-201ENST00000622177 108 ntBASIC1.31□□□□□ -2.2
SHROOM4Q9ULL8 RNU6-740P-201ENST00000364734 105 ntBASIC1.3□□□□□ -2.2
SHROOM4Q9ULL8 MT-TN-201ENST00000387400 73 ntBASIC1.3□□□□□ -2.2
SHROOM4Q9ULL8 RNU6-1299P-201ENST00000516316 100 ntBASIC1.3□□□□□ -2.2
SHROOM4Q9ULL8 AP003072.1-201ENST00000531740 145 ntBASIC1.3□□□□□ -2.2
SHROOM4Q9ULL8 MIR1-1-201ENST00000362147 71 ntBASIC1.29□□□□□ -2.2
SHROOM4Q9ULL8 RNU6-654P-201ENST00000364373 107 ntBASIC1.29□□□□□ -2.2
SHROOM4Q9ULL8 Y_RNA.237-201ENST00000364439 102 ntBASIC1.29□□□□□ -2.2
SHROOM4Q9ULL8 Y_RNA.274-201ENST00000364714 101 ntBASIC1.29□□□□□ -2.2
SHROOM4Q9ULL8 RPL39P28-201ENST00000465655 155 ntBASIC1.29□□□□□ -2.2
SHROOM4Q9ULL8 PSMC1P5-201ENST00000512850 177 ntBASIC1.29□□□□□ -2.2
SHROOM4Q9ULL8 Y_RNA.679-201ENST00000516416 91 ntBASIC1.28□□□□□ -2.2
SHROOM4Q9ULL8 Y_RNA.720-201ENST00000517166 92 ntBASIC1.28□□□□□ -2.2
SHROOM4Q9ULL8 AP001282.2-201ENST00000616149 309 ntBASIC1.28□□□□□ -2.2
SHROOM4Q9ULL8 MIR6866-201ENST00000638146 69 ntBASIC1.28□□□□□ -2.2
SHROOM4Q9ULL8 Y_RNA.117-201ENST00000363294 101 ntBASIC1.27□□□□□ -2.21
SHROOM4Q9ULL8 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.27□□□□□ -2.21
SHROOM4Q9ULL8 Y_RNA.37-201ENST00000362606 108 ntBASIC1.26□□□□□ -2.21
SHROOM4Q9ULL8 Y_RNA.168-201ENST00000363740 102 ntBASIC1.26□□□□□ -2.21
SHROOM4Q9ULL8 Y_RNA.229-201ENST00000364347 113 ntBASIC1.26□□□□□ -2.21
SHROOM4Q9ULL8 RNU6-1187P-201ENST00000364771 110 ntBASIC1.26□□□□□ -2.21
SHROOM4Q9ULL8 SNORD24-201ENST00000383884 75 ntBASIC1.26□□□□□ -2.21
SHROOM4Q9ULL8 RNU6-1160P-201ENST00000384546 104 ntBASIC1.26□□□□□ -2.21
SHROOM4Q9ULL8 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.26□□□□□ -2.21
SHROOM4Q9ULL8 MIR4653-201ENST00000585107 83 ntBASIC1.26□□□□□ -2.21
SHROOM4Q9ULL8 7SK.10-201ENST00000621414 298 ntBASIC1.26□□□□□ -2.21
SHROOM4Q9ULL8 SNORA63-201ENST00000363450 132 ntBASIC1.25□□□□□ -2.21
SHROOM4Q9ULL8 Y_RNA.176-201ENST00000363815 109 ntBASIC1.25□□□□□ -2.21
SHROOM4Q9ULL8 SNORA24-201ENST00000384096 131 ntBASIC1.25□□□□□ -2.21
SHROOM4Q9ULL8 Y_RNA.590-201ENST00000410140 107 ntBASIC1.25□□□□□ -2.21
SHROOM4Q9ULL8 AC007751.1-201ENST00000529260 376 ntBASIC1.25□□□□□ -2.21
SHROOM4Q9ULL8 AP003484.1-201ENST00000530974 250 ntBASIC1.25□□□□□ -2.21
SHROOM4Q9ULL8 AL353765.1-201ENST00000605514 183 ntBASIC1.25□□□□□ -2.21
SHROOM4Q9ULL8 RNU6-94P-201ENST00000607728 107 ntBASIC1.25□□□□□ -2.21
SHROOM4Q9ULL8 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
SHROOM4Q9ULL8 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.25□□□□□ -2.21
SHROOM4Q9ULL8 SNORD61-201ENST00000384252 73 ntBASIC1.24□□□□□ -2.21
SHROOM4Q9ULL8 Y_RNA.494-201ENST00000384432 111 ntBASIC1.24□□□□□ -2.21
SHROOM4Q9ULL8 RNU2-70P-201ENST00000410718 179 ntBASIC1.24□□□□□ -2.21
SHROOM4Q9ULL8 AL035398.1-201ENST00000430869 322 ntBASIC1.24□□□□□ -2.21
SHROOM4Q9ULL8 MIR8062-201ENST00000621515 85 ntBASIC1.24□□□□□ -2.21
SHROOM4Q9ULL8 Y_RNA.82-201ENST00000363000 102 ntBASIC1.24□□□□□ -2.21
SHROOM4Q9ULL8 Y_RNA.92-201ENST00000363043 102 ntBASIC1.24□□□□□ -2.21
SHROOM4Q9ULL8 Y_RNA.235-201ENST00000364412 102 ntBASIC1.24□□□□□ -2.21
SHROOM4Q9ULL8 Y_RNA.306-201ENST00000365015 102 ntBASIC1.24□□□□□ -2.21
SHROOM4Q9ULL8 Y_RNA.312-201ENST00000365089 102 ntBASIC1.24□□□□□ -2.21
SHROOM4Q9ULL8 Y_RNA.322-201ENST00000365151 102 ntBASIC1.24□□□□□ -2.21
SHROOM4Q9ULL8 RNU6-580P-201ENST00000365159 107 ntBASIC1.24□□□□□ -2.21
SHROOM4Q9ULL8 SNORA27-201ENST00000384323 126 ntBASIC1.24□□□□□ -2.21
SHROOM4Q9ULL8 SNORD38B-201ENST00000384690 67 ntBASIC1.24□□□□□ -2.21
SHROOM4Q9ULL8 Y_RNA.650-201ENST00000459002 102 ntBASIC1.24□□□□□ -2.21
SHROOM4Q9ULL8 Y_RNA.777-201ENST00000516982 102 ntBASIC1.24□□□□□ -2.21
SHROOM4Q9ULL8 Y_RNA.771-201ENST00000598668 102 ntBASIC1.24□□□□□ -2.21
SHROOM4Q9ULL8 AC023932.2-201ENST00000603176 175 ntBASIC1.24□□□□□ -2.21
SHROOM4Q9ULL8 Y_RNA.812-201ENST00000610788 101 ntBASIC1.24□□□□□ -2.21
SHROOM4Q9ULL8 Y_RNA.784-201ENST00000613803 101 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms