Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.47□□□□□ -2.01
FOXD3Q9UJU5 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
FOXD3Q9UJU5 MIR26A1-201ENST00000362205 77 ntBASIC2.47□□□□□ -2.01
FOXD3Q9UJU5 Y_RNA.10-201ENST00000362371 110 ntBASIC2.47□□□□□ -2.01
FOXD3Q9UJU5 RNU4-67P-201ENST00000364569 141 ntBASIC2.47□□□□□ -2.01
FOXD3Q9UJU5 RNA5SP212-201ENST00000391223 107 ntBASIC2.47□□□□□ -2.01
FOXD3Q9UJU5 AC004965.1-201ENST00000413033 213 ntBASIC2.47□□□□□ -2.01
FOXD3Q9UJU5 RNA5SP57-201ENST00000459463 123 ntBASIC2.47□□□□□ -2.01
FOXD3Q9UJU5 RNU6-917P-201ENST00000516294 104 ntBASIC2.47□□□□□ -2.01
FOXD3Q9UJU5 DEFB131E-201ENST00000532329 154 ntBASIC2.47□□□□□ -2.01
FOXD3Q9UJU5 AC079600.2-201ENST00000550076 130 ntBASIC2.47□□□□□ -2.01
FOXD3Q9UJU5 MIR4764-201ENST00000580680 88 ntBASIC2.47□□□□□ -2.01
FOXD3Q9UJU5 MIR3605-201ENST00000583214 100 ntBASIC2.47□□□□□ -2.01
FOXD3Q9UJU5 AC008133.2-201ENST00000624540 351 ntBASIC2.47□□□□□ -2.01
FOXD3Q9UJU5 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.47□□□□□ -2.01
FOXD3Q9UJU5 Y_RNA.93-201ENST00000363066 109 ntBASIC2.46□□□□□ -2.02
FOXD3Q9UJU5 SNORA1.1-201ENST00000364671 133 ntBASIC2.46□□□□□ -2.02
FOXD3Q9UJU5 RNA5SP126-201ENST00000365092 109 ntBASIC2.46□□□□□ -2.02
FOXD3Q9UJU5 RNU6-203P-201ENST00000384038 104 ntBASIC2.46□□□□□ -2.02
FOXD3Q9UJU5 RNU6-409P-201ENST00000384114 104 ntBASIC2.46□□□□□ -2.02
FOXD3Q9UJU5 Y_RNA.470-201ENST00000384307 117 ntBASIC2.46□□□□□ -2.02
FOXD3Q9UJU5 MIR653-201ENST00000385279 96 ntBASIC2.46□□□□□ -2.02
FOXD3Q9UJU5 AL138827.1-201ENST00000402666 306 ntBASIC2.46□□□□□ -2.02
FOXD3Q9UJU5 SNORA19.1-201ENST00000410656 129 ntBASIC2.46□□□□□ -2.02
FOXD3Q9UJU5 RNU6-733P-201ENST00000410759 104 ntBASIC2.46□□□□□ -2.02
FOXD3Q9UJU5 RNU6-1190P-201ENST00000410811 104 ntBASIC2.46□□□□□ -2.02
FOXD3Q9UJU5 SNORA9.3-201ENST00000516383 129 ntBASIC2.46□□□□□ -2.02
FOXD3Q9UJU5 RNU6-826P-201ENST00000516827 104 ntBASIC2.46□□□□□ -2.02
FOXD3Q9UJU5 MIR4694-201ENST00000578534 80 ntBASIC2.46□□□□□ -2.02
FOXD3Q9UJU5 MIR548AE2-201ENST00000583456 67 ntBASIC2.46□□□□□ -2.02
FOXD3Q9UJU5 MIR8055-201ENST00000610739 97 ntBASIC2.46□□□□□ -2.02
FOXD3Q9UJU5 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.46□□□□□ -2.02
FOXD3Q9UJU5 AC131280.1-202ENST00000624067 4211 ntBASIC2.46□□□□□ -2.02
FOXD3Q9UJU5 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
FOXD3Q9UJU5 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
FOXD3Q9UJU5 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
FOXD3Q9UJU5 Y_RNA.155-201ENST00000363632 101 ntBASIC2.45□□□□□ -2.02
FOXD3Q9UJU5 Y_RNA.354-201ENST00000365448 111 ntBASIC2.45□□□□□ -2.02
FOXD3Q9UJU5 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.45□□□□□ -2.02
FOXD3Q9UJU5 DEFB122-202ENST00000569013 197 ntBASIC2.45□□□□□ -2.02
FOXD3Q9UJU5 Y_RNA.773-201ENST00000607168 90 ntBASIC2.45□□□□□ -2.02
FOXD3Q9UJU5 AC064859.1-201ENST00000624741 174 ntBASIC2.45□□□□□ -2.02
FOXD3Q9UJU5 MIR1255B1-201ENST00000636325 63 ntBASIC2.45□□□□□ -2.02
FOXD3Q9UJU5 RNU4-82P-201ENST00000362443 140 ntBASIC2.44□□□□□ -2.02
FOXD3Q9UJU5 RNY3P2-201ENST00000362918 102 ntBASIC2.44□□□□□ -2.02
FOXD3Q9UJU5 MIR520C-201ENST00000385005 87 ntBASIC2.44□□□□□ -2.02
FOXD3Q9UJU5 AL161935.2-201ENST00000414627 60 ntBASIC2.44□□□□□ -2.02
FOXD3Q9UJU5 RNU6-109P-201ENST00000516364 107 ntBASIC2.44□□□□□ -2.02
FOXD3Q9UJU5 RNU6-184P-201ENST00000516514 107 ntBASIC2.44□□□□□ -2.02
FOXD3Q9UJU5 Z97988.1-201ENST00000637697 135 ntBASIC2.44□□□□□ -2.02
FOXD3Q9UJU5 AP000648.3-201ENST00000623539 4507 ntBASIC2.44□□□□□ -2.02
FOXD3Q9UJU5 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.43□□□□□ -2.02
FOXD3Q9UJU5 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
FOXD3Q9UJU5 RNU6-1099P-201ENST00000363533 107 ntBASIC2.43□□□□□ -2.02
FOXD3Q9UJU5 Y_RNA.601-201ENST00000410500 113 ntBASIC2.43□□□□□ -2.02
FOXD3Q9UJU5 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.43□□□□□ -2.02
FOXD3Q9UJU5 MTATP8P2-201ENST00000435212 202 ntBASIC2.43□□□□□ -2.02
FOXD3Q9UJU5 JTBP1-201ENST00000441314 247 ntBASIC2.43□□□□□ -2.02
FOXD3Q9UJU5 SCARNA23-201ENST00000516060 130 ntBASIC2.43□□□□□ -2.02
FOXD3Q9UJU5 SNORA31.15-201ENST00000516771 132 ntBASIC2.43□□□□□ -2.02
FOXD3Q9UJU5 AC104984.5-201ENST00000586878 94 ntBASIC2.43□□□□□ -2.02
FOXD3Q9UJU5 AL513534.2-201ENST00000603836 250 ntBASIC2.43□□□□□ -2.02
FOXD3Q9UJU5 AL049779.4-201ENST00000604500 156 ntBASIC2.43□□□□□ -2.02
FOXD3Q9UJU5 AC010297.1-201ENST00000623948 149 ntBASIC2.43□□□□□ -2.02
FOXD3Q9UJU5 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.43□□□□□ -2.02
FOXD3Q9UJU5 Y_RNA.107-201ENST00000363190 121 ntBASIC2.42□□□□□ -2.02
FOXD3Q9UJU5 Y_RNA.360-201ENST00000365512 102 ntBASIC2.42□□□□□ -2.02
FOXD3Q9UJU5 AL451046.2-201ENST00000403074 277 ntBASIC2.42□□□□□ -2.02
FOXD3Q9UJU5 MIR1302-4-201ENST00000408701 150 ntBASIC2.42□□□□□ -2.02
FOXD3Q9UJU5 RNA5SP508-201ENST00000411327 119 ntBASIC2.42□□□□□ -2.02
FOXD3Q9UJU5 AC108938.1-201ENST00000451204 136 ntBASIC2.42□□□□□ -2.02
FOXD3Q9UJU5 RNU6-1018P-201ENST00000516577 106 ntBASIC2.42□□□□□ -2.02
FOXD3Q9UJU5 MIR3945-201ENST00000581853 98 ntBASIC2.42□□□□□ -2.02
FOXD3Q9UJU5 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
FOXD3Q9UJU5 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
FOXD3Q9UJU5 RNU1-112P-201ENST00000364401 164 ntBASIC2.41□□□□□ -2.02
FOXD3Q9UJU5 AL513328.1-201ENST00000446460 224 ntBASIC2.41□□□□□ -2.02
FOXD3Q9UJU5 AC234781.5-201ENST00000508429 271 ntBASIC2.41□□□□□ -2.02
FOXD3Q9UJU5 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.41□□□□□ -2.02
FOXD3Q9UJU5 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
FOXD3Q9UJU5 Y_RNA.466-201ENST00000384294 113 ntBASIC2.4□□□□□ -2.03
FOXD3Q9UJU5 RNU6-616P-201ENST00000384353 107 ntBASIC2.4□□□□□ -2.03
FOXD3Q9UJU5 MIR513A1-201ENST00000385138 129 ntBASIC2.4□□□□□ -2.03
FOXD3Q9UJU5 HMGN1P33-201ENST00000432945 451 ntBASIC2.4□□□□□ -2.03
FOXD3Q9UJU5 MIR3670-2-201ENST00000582974 65 ntBASIC2.4□□□□□ -2.03
FOXD3Q9UJU5 MIR3670-1-201ENST00000584160 65 ntBASIC2.4□□□□□ -2.03
FOXD3Q9UJU5 MIR3670-3-201ENST00000584855 65 ntBASIC2.4□□□□□ -2.03
FOXD3Q9UJU5 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.4□□□□□ -2.03
FOXD3Q9UJU5 MIR3670-4-201ENST00000612260 65 ntBASIC2.4□□□□□ -2.03
FOXD3Q9UJU5 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
FOXD3Q9UJU5 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
FOXD3Q9UJU5 RNU6-832P-201ENST00000363319 107 ntBASIC2.39□□□□□ -2.03
FOXD3Q9UJU5 Y_RNA.220-201ENST00000364244 109 ntBASIC2.39□□□□□ -2.03
FOXD3Q9UJU5 Y_RNA.377-201ENST00000365644 108 ntBASIC2.39□□□□□ -2.03
FOXD3Q9UJU5 MIR577-201ENST00000385196 96 ntBASIC2.39□□□□□ -2.03
FOXD3Q9UJU5 MIR1270-201ENST00000459320 83 ntBASIC2.39□□□□□ -2.03
FOXD3Q9UJU5 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.39□□□□□ -2.03
FOXD3Q9UJU5 CYP3A52P-201ENST00000563326 91 ntBASIC2.39□□□□□ -2.03
FOXD3Q9UJU5 MIR6715A-201ENST00000615929 79 ntBASIC2.39□□□□□ -2.03
FOXD3Q9UJU5 MIR8065-201ENST00000620577 100 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 222.9 ms