Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 MIR4790-201ENST00000577799 79 ntBASIC-1.05□□□□□ -2.58
VPS29Q9UBQ0 MIR4636-201ENST00000582271 80 ntBASIC-1.05□□□□□ -2.58
VPS29Q9UBQ0 RNU6-1292P-201ENST00000383856 107 ntBASIC-1.06□□□□□ -2.58
VPS29Q9UBQ0 RNU6-780P-201ENST00000391030 104 ntBASIC-1.06□□□□□ -2.58
VPS29Q9UBQ0 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC-1.06□□□□□ -2.58
VPS29Q9UBQ0 RNU7-141P-201ENST00000459304 62 ntBASIC-1.06□□□□□ -2.58
VPS29Q9UBQ0 RNU7-104P-201ENST00000459398 79 ntBASIC-1.06□□□□□ -2.58
VPS29Q9UBQ0 SNORA25.13-201ENST00000516395 103 ntBASIC-1.06□□□□□ -2.58
VPS29Q9UBQ0 RNU7-161P-201ENST00000517289 62 ntBASIC-1.06□□□□□ -2.58
VPS29Q9UBQ0 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC-1.06□□□□□ -2.58
VPS29Q9UBQ0 AC090617.10-201ENST00000624308 134 ntBASIC-1.06□□□□□ -2.58
VPS29Q9UBQ0 AC124864.2-201ENST00000624736 186 ntBASIC-1.06□□□□□ -2.58
VPS29Q9UBQ0 MTND5P26-201ENST00000426018 1752 ntBASIC-1.06□□□□□ -2.58
VPS29Q9UBQ0 Y_RNA.359-201ENST00000365498 102 ntBASIC-1.07□□□□□ -2.58
VPS29Q9UBQ0 RNU6-47P-201ENST00000383866 107 ntBASIC-1.07□□□□□ -2.58
VPS29Q9UBQ0 RNU6-949P-201ENST00000384040 107 ntBASIC-1.07□□□□□ -2.58
VPS29Q9UBQ0 RNY3P4-201ENST00000384428 101 ntBASIC-1.07□□□□□ -2.58
VPS29Q9UBQ0 SNORA69.1-201ENST00000390904 137 ntBASIC-1.07□□□□□ -2.58
VPS29Q9UBQ0 Y_RNA.587-201ENST00000391210 103 ntBASIC-1.07□□□□□ -2.58
VPS29Q9UBQ0 Y_RNA.592-201ENST00000410274 109 ntBASIC-1.07□□□□□ -2.58
VPS29Q9UBQ0 RNU6-1050P-201ENST00000410388 107 ntBASIC-1.07□□□□□ -2.58
VPS29Q9UBQ0 RNA5SP261-201ENST00000410536 106 ntBASIC-1.07□□□□□ -2.58
VPS29Q9UBQ0 AC074198.2-201ENST00000508153 258 ntBASIC-1.07□□□□□ -2.58
VPS29Q9UBQ0 RNU6-1170P-201ENST00000515974 106 ntBASIC-1.07□□□□□ -2.58
VPS29Q9UBQ0 Y_RNA.692-201ENST00000516627 105 ntBASIC-1.07□□□□□ -2.58
VPS29Q9UBQ0 RNU2-31P-201ENST00000516954 155 ntBASIC-1.07□□□□□ -2.58
VPS29Q9UBQ0 AL360085.1-201ENST00000604713 532 ntBASIC-1.07□□□□□ -2.58
VPS29Q9UBQ0 AC108676.2-201ENST00000605225 163 ntBASIC-1.07□□□□□ -2.58
VPS29Q9UBQ0 AC011373.1-201ENST00000607270 237 ntBASIC-1.07□□□□□ -2.58
VPS29Q9UBQ0 AC063944.3-201ENST00000609969 533 ntBASIC-1.07□□□□□ -2.58
VPS29Q9UBQ0 AC011476.5-201ENST00000615594 130 ntBASIC-1.07□□□□□ -2.58
VPS29Q9UBQ0 Y_RNA.371-201ENST00000365591 113 ntBASIC-1.08□□□□□ -2.58
VPS29Q9UBQ0 RNU6-831P-201ENST00000384548 107 ntBASIC-1.08□□□□□ -2.58
VPS29Q9UBQ0 AC093726.3-201ENST00000637588 150 ntBASIC-1.08□□□□□ -2.58
VPS29Q9UBQ0 RNU6-1138P-201ENST00000365359 106 ntBASIC-1.09□□□□□ -2.58
VPS29Q9UBQ0 RNY1P7-201ENST00000384743 110 ntBASIC-1.09□□□□□ -2.58
VPS29Q9UBQ0 Y_RNA.570-201ENST00000384750 101 ntBASIC-1.09□□□□□ -2.58
VPS29Q9UBQ0 AC244505.6-201ENST00000452829 130 ntBASIC-1.09□□□□□ -2.58
VPS29Q9UBQ0 AC019235.1-201ENST00000503847 207 ntBASIC-1.09□□□□□ -2.58
VPS29Q9UBQ0 RNU6-758P-201ENST00000516292 89 ntBASIC-1.09□□□□□ -2.58
VPS29Q9UBQ0 RNU6-1314P-201ENST00000517139 104 ntBASIC-1.09□□□□□ -2.58
VPS29Q9UBQ0 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-1.09□□□□□ -2.58
VPS29Q9UBQ0 Y_RNA.38-201ENST00000362617 102 ntBASIC-1.1□□□□□ -2.59
VPS29Q9UBQ0 Y_RNA.436-201ENST00000384097 102 ntBASIC-1.1□□□□□ -2.59
VPS29Q9UBQ0 Y_RNA.553-201ENST00000384670 102 ntBASIC-1.1□□□□□ -2.59
VPS29Q9UBQ0 SNORD41.1-201ENST00000391000 69 ntBASIC-1.1□□□□□ -2.59
VPS29Q9UBQ0 AC010655.3-201ENST00000478818 450 ntBASIC-1.1□□□□□ -2.59
VPS29Q9UBQ0 MTND5P5-201ENST00000503764 376 ntBASIC-1.1□□□□□ -2.59
VPS29Q9UBQ0 RNU6-693P-201ENST00000516134 107 ntBASIC-1.1□□□□□ -2.59
VPS29Q9UBQ0 Y_RNA.708-201ENST00000516950 96 ntBASIC-1.1□□□□□ -2.59
VPS29Q9UBQ0 DEFB131E-201ENST00000532329 154 ntBASIC-1.1□□□□□ -2.59
VPS29Q9UBQ0 MIR4659A-201ENST00000580269 81 ntBASIC-1.1□□□□□ -2.59
VPS29Q9UBQ0 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC-1.1□□□□□ -2.59
VPS29Q9UBQ0 MIR342-201ENST00000362212 99 ntBASIC-1.11□□□□□ -2.59
VPS29Q9UBQ0 RNU6-593P-201ENST00000364716 112 ntBASIC-1.11□□□□□ -2.59
VPS29Q9UBQ0 RNU6-99P-201ENST00000364721 107 ntBASIC-1.11□□□□□ -2.59
VPS29Q9UBQ0 RNU6-1203P-201ENST00000410703 110 ntBASIC-1.11□□□□□ -2.59
VPS29Q9UBQ0 RNA5SP484-201ENST00000458857 111 ntBASIC-1.11□□□□□ -2.59
VPS29Q9UBQ0 RNU7-45P-201ENST00000459460 63 ntBASIC-1.11□□□□□ -2.59
VPS29Q9UBQ0 MIR3681-201ENST00000580089 72 ntBASIC-1.11□□□□□ -2.59
VPS29Q9UBQ0 AC005899.2-201ENST00000584353 90 ntBASIC-1.11□□□□□ -2.59
VPS29Q9UBQ0 AC087588.2-201ENST00000617667 426 ntBASIC-1.11□□□□□ -2.59
VPS29Q9UBQ0 MIR302B-201ENST00000362188 73 ntBASIC-1.12□□□□□ -2.59
VPS29Q9UBQ0 RNU6-702P-201ENST00000364982 107 ntBASIC-1.12□□□□□ -2.59
VPS29Q9UBQ0 SNORA72.4-201ENST00000384174 132 ntBASIC-1.12□□□□□ -2.59
VPS29Q9UBQ0 RNU6-1042P-201ENST00000384204 107 ntBASIC-1.12□□□□□ -2.59
VPS29Q9UBQ0 MIR548A2-201ENST00000384956 97 ntBASIC-1.12□□□□□ -2.59
VPS29Q9UBQ0 RNU2-14P-201ENST00000411053 191 ntBASIC-1.12□□□□□ -2.59
VPS29Q9UBQ0 AC009161.1-201ENST00000417306 376 ntBASIC-1.12□□□□□ -2.59
VPS29Q9UBQ0 OSBPL9P5-201ENST00000542581 171 ntBASIC-1.12□□□□□ -2.59
VPS29Q9UBQ0 AL356055.1-201ENST00000602528 446 ntBASIC-1.12□□□□□ -2.59
VPS29Q9UBQ0 RNU4-58P-201ENST00000363192 141 ntBASIC-1.13□□□□□ -2.59
VPS29Q9UBQ0 RNA5SP368-201ENST00000364298 116 ntBASIC-1.13□□□□□ -2.59
VPS29Q9UBQ0 Y_RNA.331-201ENST00000365267 102 ntBASIC-1.13□□□□□ -2.59
VPS29Q9UBQ0 SNORD24-201ENST00000383884 75 ntBASIC-1.13□□□□□ -2.59
VPS29Q9UBQ0 RNU6-455P-201ENST00000384681 107 ntBASIC-1.13□□□□□ -2.59
VPS29Q9UBQ0 MIR204-201ENST00000385200 110 ntBASIC-1.13□□□□□ -2.59
VPS29Q9UBQ0 RNU6-1156P-201ENST00000410365 100 ntBASIC-1.13□□□□□ -2.59
VPS29Q9UBQ0 RNU6-373P-201ENST00000411247 98 ntBASIC-1.13□□□□□ -2.59
VPS29Q9UBQ0 RNU6-531P-201ENST00000516694 104 ntBASIC-1.13□□□□□ -2.59
VPS29Q9UBQ0 RNU6-307P-201ENST00000516743 106 ntBASIC-1.13□□□□□ -2.59
VPS29Q9UBQ0 RNU7-188P-201ENST00000517063 64 ntBASIC-1.13□□□□□ -2.59
VPS29Q9UBQ0 AP001328.1-201ENST00000528550 176 ntBASIC-1.13□□□□□ -2.59
VPS29Q9UBQ0 MIR4662B-201ENST00000579498 81 ntBASIC-1.13□□□□□ -2.59
VPS29Q9UBQ0 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-1.13□□□□□ -2.59
VPS29Q9UBQ0 AC119751.7-201ENST00000600494 245 ntBASIC-1.13□□□□□ -2.59
VPS29Q9UBQ0 RNA5SP403-201ENST00000363598 108 ntBASIC-1.14□□□□□ -2.59
VPS29Q9UBQ0 RNU6-865P-201ENST00000364772 107 ntBASIC-1.14□□□□□ -2.59
VPS29Q9UBQ0 Y_RNA.430-201ENST00000384081 110 ntBASIC-1.14□□□□□ -2.59
VPS29Q9UBQ0 Z95118.1-201ENST00000421372 247 ntBASIC-1.14□□□□□ -2.59
VPS29Q9UBQ0 AL445193.1-201ENST00000441183 141 ntBASIC-1.14□□□□□ -2.59
VPS29Q9UBQ0 MIR3145-201ENST00000580727 82 ntBASIC-1.14□□□□□ -2.59
VPS29Q9UBQ0 MIR4423-201ENST00000580922 80 ntBASIC-1.14□□□□□ -2.59
VPS29Q9UBQ0 AL021707.8-201ENST00000609428 183 ntBASIC-1.14□□□□□ -2.59
VPS29Q9UBQ0 AC024614.3-201ENST00000637860 256 ntBASIC-1.14□□□□□ -2.59
VPS29Q9UBQ0 SNORD81.1-201ENST00000363064 77 ntBASIC-1.15□□□□□ -2.59
VPS29Q9UBQ0 SNORD95.1-201ENST00000364099 68 ntBASIC-1.15□□□□□ -2.59
VPS29Q9UBQ0 Y_RNA.301-201ENST00000364990 103 ntBASIC-1.15□□□□□ -2.59
VPS29Q9UBQ0 RNU6-259P-201ENST00000383999 107 ntBASIC-1.15□□□□□ -2.59
VPS29Q9UBQ0 Y_RNA.486-201ENST00000384398 107 ntBASIC-1.15□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 191.5 ms