Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 MIR802-201ENST00000390235 94 ntBASIC1.63□□□□□ -2.15
NCKIPSDQ9NZQ3 MIR891A-201ENST00000401237 79 ntBASIC1.63□□□□□ -2.15
NCKIPSDQ9NZQ3 MIR934-201ENST00000401241 83 ntBASIC1.63□□□□□ -2.15
NCKIPSDQ9NZQ3 AL161935.2-201ENST00000414627 60 ntBASIC1.63□□□□□ -2.15
NCKIPSDQ9NZQ3 SNRPGP13-201ENST00000442212 177 ntBASIC1.63□□□□□ -2.15
NCKIPSDQ9NZQ3 AC093850.1-201ENST00000454121 251 ntBASIC1.63□□□□□ -2.15
NCKIPSDQ9NZQ3 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.63□□□□□ -2.15
NCKIPSDQ9NZQ3 DNAJC19P9-201ENST00000555084 351 ntBASIC1.63□□□□□ -2.15
NCKIPSDQ9NZQ3 MIR4778-201ENST00000577635 80 ntBASIC1.63□□□□□ -2.15
NCKIPSDQ9NZQ3 MIR3121-201ENST00000579680 77 ntBASIC1.63□□□□□ -2.15
NCKIPSDQ9NZQ3 AC027279.3-201ENST00000625055 122 ntBASIC1.63□□□□□ -2.15
NCKIPSDQ9NZQ3 U8.1-201ENST00000362843 134 ntBASIC1.62□□□□□ -2.15
NCKIPSDQ9NZQ3 Y_RNA.280-201ENST00000364765 112 ntBASIC1.62□□□□□ -2.15
NCKIPSDQ9NZQ3 Y_RNA.336-201ENST00000365307 109 ntBASIC1.62□□□□□ -2.15
NCKIPSDQ9NZQ3 Y_RNA.353-201ENST00000365440 108 ntBASIC1.62□□□□□ -2.15
NCKIPSDQ9NZQ3 RNA5SP259-201ENST00000365541 109 ntBASIC1.62□□□□□ -2.15
NCKIPSDQ9NZQ3 MIR660-201ENST00000385235 97 ntBASIC1.62□□□□□ -2.15
NCKIPSDQ9NZQ3 MIR548O-201ENST00000408583 114 ntBASIC1.62□□□□□ -2.15
NCKIPSDQ9NZQ3 HMGN2P32-201ENST00000444648 269 ntBASIC1.62□□□□□ -2.15
NCKIPSDQ9NZQ3 RNU6-693P-201ENST00000516134 107 ntBASIC1.62□□□□□ -2.15
NCKIPSDQ9NZQ3 RNU7-25P-201ENST00000516544 62 ntBASIC1.62□□□□□ -2.15
NCKIPSDQ9NZQ3 Y_RNA.712-201ENST00000517011 92 ntBASIC1.62□□□□□ -2.15
NCKIPSDQ9NZQ3 SUMO2P16-201ENST00000519475 264 ntBASIC1.62□□□□□ -2.15
NCKIPSDQ9NZQ3 AL359821.1-201ENST00000605519 182 ntBASIC1.62□□□□□ -2.15
NCKIPSDQ9NZQ3 AL513423.1-201ENST00000621695 132 ntBASIC1.62□□□□□ -2.15
NCKIPSDQ9NZQ3 SNORD3E-202ENST00000627253 216 ntBASIC1.62□□□□□ -2.15
NCKIPSDQ9NZQ3 Y_RNA.52-201ENST00000362760 96 ntBASIC1.61□□□□□ -2.15
NCKIPSDQ9NZQ3 RNU6-833P-201ENST00000363486 107 ntBASIC1.61□□□□□ -2.15
NCKIPSDQ9NZQ3 MIR526A1-201ENST00000384897 85 ntBASIC1.61□□□□□ -2.15
NCKIPSDQ9NZQ3 RNU4-62P-201ENST00000410125 130 ntBASIC1.61□□□□□ -2.15
NCKIPSDQ9NZQ3 Y_RNA.686-201ENST00000516548 134 ntBASIC1.61□□□□□ -2.15
NCKIPSDQ9NZQ3 Y_RNA.690-201ENST00000516603 95 ntBASIC1.61□□□□□ -2.15
NCKIPSDQ9NZQ3 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.61□□□□□ -2.15
NCKIPSDQ9NZQ3 MIR4781-201ENST00000585250 76 ntBASIC1.61□□□□□ -2.15
NCKIPSDQ9NZQ3 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.61□□□□□ -2.15
NCKIPSDQ9NZQ3 MIR376A2-201ENST00000636782 80 ntBASIC1.61□□□□□ -2.15
NCKIPSDQ9NZQ3 RNU6-647P-201ENST00000364243 107 ntBASIC1.6□□□□□ -2.15
NCKIPSDQ9NZQ3 Y_RNA.410-201ENST00000383992 113 ntBASIC1.6□□□□□ -2.15
NCKIPSDQ9NZQ3 Y_RNA.547-201ENST00000384654 119 ntBASIC1.6□□□□□ -2.15
NCKIPSDQ9NZQ3 RNU6-997P-201ENST00000384725 107 ntBASIC1.6□□□□□ -2.15
NCKIPSDQ9NZQ3 RNU6-321P-201ENST00000410912 106 ntBASIC1.6□□□□□ -2.15
NCKIPSDQ9NZQ3 AF228730.3-201ENST00000436691 102 ntBASIC1.6□□□□□ -2.15
NCKIPSDQ9NZQ3 AL158147.1-201ENST00000443970 75 ntBASIC1.6□□□□□ -2.15
NCKIPSDQ9NZQ3 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.6□□□□□ -2.15
NCKIPSDQ9NZQ3 RNU7-12P-201ENST00000516030 62 ntBASIC1.6□□□□□ -2.15
NCKIPSDQ9NZQ3 MIR3129-201ENST00000581095 76 ntBASIC1.6□□□□□ -2.15
NCKIPSDQ9NZQ3 MIR4422-201ENST00000581938 83 ntBASIC1.6□□□□□ -2.15
NCKIPSDQ9NZQ3 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.6□□□□□ -2.15
NCKIPSDQ9NZQ3 Y_RNA.81-201ENST00000362997 102 ntBASIC1.59□□□□□ -2.15
NCKIPSDQ9NZQ3 Y_RNA.114-201ENST00000363265 113 ntBASIC1.59□□□□□ -2.15
NCKIPSDQ9NZQ3 MIR517C-201ENST00000385103 95 ntBASIC1.59□□□□□ -2.15
NCKIPSDQ9NZQ3 RNU6-938P-201ENST00000411285 103 ntBASIC1.59□□□□□ -2.15
NCKIPSDQ9NZQ3 AC009474.2-201ENST00000451383 136 ntBASIC1.59□□□□□ -2.15
NCKIPSDQ9NZQ3 AC079140.2-201ENST00000506193 142 ntBASIC1.59□□□□□ -2.15
NCKIPSDQ9NZQ3 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.59□□□□□ -2.15
NCKIPSDQ9NZQ3 TRMT112P2-201ENST00000512910 132 ntBASIC1.59□□□□□ -2.15
NCKIPSDQ9NZQ3 RNU2-60P-201ENST00000517290 128 ntBASIC1.59□□□□□ -2.15
NCKIPSDQ9NZQ3 AC019176.1-201ENST00000518519 225 ntBASIC1.59□□□□□ -2.15
NCKIPSDQ9NZQ3 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.59□□□□□ -2.15
NCKIPSDQ9NZQ3 MIR3937-201ENST00000580135 106 ntBASIC1.59□□□□□ -2.15
NCKIPSDQ9NZQ3 AC134878.1-201ENST00000619901 243 ntBASIC1.59□□□□□ -2.15
NCKIPSDQ9NZQ3 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.59□□□□□ -2.16
NCKIPSDQ9NZQ3 Y_RNA.294-201ENST00000364916 102 ntBASIC1.58□□□□□ -2.16
NCKIPSDQ9NZQ3 SNORD1A-201ENST00000364968 72 ntBASIC1.58□□□□□ -2.16
NCKIPSDQ9NZQ3 RNU6-1056P-201ENST00000383996 107 ntBASIC1.58□□□□□ -2.16
NCKIPSDQ9NZQ3 MIR516B2-201ENST00000385190 85 ntBASIC1.58□□□□□ -2.16
NCKIPSDQ9NZQ3 SNORA67.6-201ENST00000391093 99 ntBASIC1.58□□□□□ -2.16
NCKIPSDQ9NZQ3 SNORD77.3-201ENST00000391113 65 ntBASIC1.58□□□□□ -2.16
NCKIPSDQ9NZQ3 RNU6-113P-201ENST00000516653 101 ntBASIC1.58□□□□□ -2.16
NCKIPSDQ9NZQ3 AC015688.6-201ENST00000577737 104 ntBASIC1.58□□□□□ -2.16
NCKIPSDQ9NZQ3 MIR4303-201ENST00000581299 66 ntBASIC1.58□□□□□ -2.16
NCKIPSDQ9NZQ3 AC015726.2-201ENST00000620112 122 ntBASIC1.58□□□□□ -2.16
NCKIPSDQ9NZQ3 U6.95-201ENST00000636931 70 ntBASIC1.58□□□□□ -2.16
NCKIPSDQ9NZQ3 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
NCKIPSDQ9NZQ3 RNU6-235P-201ENST00000362644 107 ntBASIC1.57□□□□□ -2.16
NCKIPSDQ9NZQ3 SNORD33-201ENST00000362761 85 ntBASIC1.57□□□□□ -2.16
NCKIPSDQ9NZQ3 RNU6-309P-201ENST00000364573 106 ntBASIC1.57□□□□□ -2.16
NCKIPSDQ9NZQ3 RNU6-215P-201ENST00000365169 102 ntBASIC1.57□□□□□ -2.16
NCKIPSDQ9NZQ3 AC015922.2-201ENST00000435593 184 ntBASIC1.57□□□□□ -2.16
NCKIPSDQ9NZQ3 RNU7-107P-201ENST00000459121 61 ntBASIC1.57□□□□□ -2.16
NCKIPSDQ9NZQ3 RNA5SP236-201ENST00000516169 116 ntBASIC1.57□□□□□ -2.16
NCKIPSDQ9NZQ3 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.57□□□□□ -2.16
NCKIPSDQ9NZQ3 MIR4285-201ENST00000581001 85 ntBASIC1.57□□□□□ -2.16
NCKIPSDQ9NZQ3 MIR5197-201ENST00000583721 112 ntBASIC1.57□□□□□ -2.16
NCKIPSDQ9NZQ3 AL022345.2-201ENST00000606307 135 ntBASIC1.57□□□□□ -2.16
NCKIPSDQ9NZQ3 BX248123.2-201ENST00000606318 124 ntBASIC1.57□□□□□ -2.16
NCKIPSDQ9NZQ3 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.57□□□□□ -2.16
NCKIPSDQ9NZQ3 MIR3914-2-201ENST00000637339 95 ntBASIC1.57□□□□□ -2.16
NCKIPSDQ9NZQ3 MTND5P32-201ENST00000560711 1802 ntBASIC1.56□□□□□ -2.16
NCKIPSDQ9NZQ3 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.56□□□□□ -2.16
NCKIPSDQ9NZQ3 SNORD115-28-201ENST00000363931 81 ntBASIC1.56□□□□□ -2.16
NCKIPSDQ9NZQ3 SNORD20-201ENST00000384550 80 ntBASIC1.56□□□□□ -2.16
NCKIPSDQ9NZQ3 Y_RNA.617-201ENST00000410920 90 ntBASIC1.56□□□□□ -2.16
NCKIPSDQ9NZQ3 AC087499.4-201ENST00000448505 178 ntBASIC1.56□□□□□ -2.16
NCKIPSDQ9NZQ3 RNU7-95P-201ENST00000459222 64 ntBASIC1.56□□□□□ -2.16
NCKIPSDQ9NZQ3 RNU6-772P-201ENST00000516042 105 ntBASIC1.56□□□□□ -2.16
NCKIPSDQ9NZQ3 RNU6-919P-201ENST00000516731 104 ntBASIC1.56□□□□□ -2.16
NCKIPSDQ9NZQ3 AC133485.4-201ENST00000561835 220 ntBASIC1.56□□□□□ -2.16
NCKIPSDQ9NZQ3 AC138907.4-201ENST00000570107 226 ntBASIC1.56□□□□□ -2.16
NCKIPSDQ9NZQ3 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms