Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 AL138752.1-201ENST00000452964 351 ntBASIC1.05□□□□□ -2.24
NDE1Q9NXR1 RPL39P39-201ENST00000455840 151 ntBASIC1.05□□□□□ -2.24
NDE1Q9NXR1 RNU7-43P-201ENST00000516554 64 ntBASIC1.05□□□□□ -2.24
NDE1Q9NXR1 RNU6-861P-201ENST00000516745 106 ntBASIC1.05□□□□□ -2.24
NDE1Q9NXR1 MIR4421-201ENST00000578133 69 ntBASIC1.05□□□□□ -2.24
NDE1Q9NXR1 MIR3129-201ENST00000581095 76 ntBASIC1.05□□□□□ -2.24
NDE1Q9NXR1 AC097639.2-201ENST00000603159 172 ntBASIC1.05□□□□□ -2.24
NDE1Q9NXR1 AC008133.2-201ENST00000624540 351 ntBASIC1.05□□□□□ -2.24
NDE1Q9NXR1 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
NDE1Q9NXR1 RNA5SP327-201ENST00000362494 101 ntBASIC1.04□□□□□ -2.24
NDE1Q9NXR1 Y_RNA.75-201ENST00000362927 97 ntBASIC1.04□□□□□ -2.24
NDE1Q9NXR1 Y_RNA.370-201ENST00000365589 108 ntBASIC1.04□□□□□ -2.24
NDE1Q9NXR1 RNU6-1336P-201ENST00000383886 109 ntBASIC1.04□□□□□ -2.24
NDE1Q9NXR1 RNU6-643P-201ENST00000384018 107 ntBASIC1.04□□□□□ -2.24
NDE1Q9NXR1 Y_RNA.435-201ENST00000384095 112 ntBASIC1.04□□□□□ -2.24
NDE1Q9NXR1 MIR7-2-201ENST00000384970 110 ntBASIC1.04□□□□□ -2.24
NDE1Q9NXR1 SNORA26-201ENST00000391286 122 ntBASIC1.04□□□□□ -2.24
NDE1Q9NXR1 RNU4-43P-201ENST00000410628 137 ntBASIC1.04□□□□□ -2.24
NDE1Q9NXR1 SEPT7P4-201ENST00000437076 306 ntBASIC1.04□□□□□ -2.24
NDE1Q9NXR1 SNORA81.3-201ENST00000517283 198 ntBASIC1.04□□□□□ -2.24
NDE1Q9NXR1 AP003484.1-201ENST00000530974 250 ntBASIC1.04□□□□□ -2.24
NDE1Q9NXR1 MIR8065-201ENST00000620577 100 ntBASIC1.04□□□□□ -2.24
NDE1Q9NXR1 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.04□□□□□ -2.24
NDE1Q9NXR1 MIR376A2-201ENST00000636782 80 ntBASIC1.04□□□□□ -2.24
NDE1Q9NXR1 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
NDE1Q9NXR1 Y_RNA.29-201ENST00000362570 113 ntBASIC1.03□□□□□ -2.24
NDE1Q9NXR1 Y_RNA.363-201ENST00000365529 113 ntBASIC1.03□□□□□ -2.24
NDE1Q9NXR1 MIR613-201ENST00000385248 95 ntBASIC1.03□□□□□ -2.24
NDE1Q9NXR1 AL133373.1-201ENST00000497098 94 ntBASIC1.03□□□□□ -2.24
NDE1Q9NXR1 AC074198.2-201ENST00000508153 258 ntBASIC1.03□□□□□ -2.24
NDE1Q9NXR1 SNORA18.4-201ENST00000516440 124 ntBASIC1.03□□□□□ -2.24
NDE1Q9NXR1 RNU6-126P-201ENST00000516685 103 ntBASIC1.03□□□□□ -2.24
NDE1Q9NXR1 RNA5SP102-201ENST00000516865 106 ntBASIC1.03□□□□□ -2.24
NDE1Q9NXR1 MRPS18CP4-201ENST00000535821 231 ntBASIC1.03□□□□□ -2.24
NDE1Q9NXR1 MIR3671-201ENST00000580455 88 ntBASIC1.03□□□□□ -2.24
NDE1Q9NXR1 AL353770.2-201ENST00000620024 78 ntBASIC1.03□□□□□ -2.24
NDE1Q9NXR1 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
NDE1Q9NXR1 RNU6-682P-201ENST00000363843 106 ntBASIC1.02□□□□□ -2.25
NDE1Q9NXR1 SNORD77.3-201ENST00000391113 65 ntBASIC1.02□□□□□ -2.25
NDE1Q9NXR1 RNU6-847P-201ENST00000411115 108 ntBASIC1.02□□□□□ -2.25
NDE1Q9NXR1 RNU5E-9P-201ENST00000411164 104 ntBASIC1.02□□□□□ -2.25
NDE1Q9NXR1 AC245047.7-201ENST00000440265 293 ntBASIC1.02□□□□□ -2.25
NDE1Q9NXR1 RPS26P48-201ENST00000491713 339 ntBASIC1.02□□□□□ -2.25
NDE1Q9NXR1 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.02□□□□□ -2.25
NDE1Q9NXR1 MIR378D2-201ENST00000580636 98 ntBASIC1.02□□□□□ -2.25
NDE1Q9NXR1 HSPE1P19-201ENST00000603327 295 ntBASIC1.02□□□□□ -2.25
NDE1Q9NXR1 AC072026.1-201ENST00000605023 201 ntBASIC1.02□□□□□ -2.25
NDE1Q9NXR1 MIR4791-201ENST00000607666 84 ntBASIC1.02□□□□□ -2.25
NDE1Q9NXR1 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
NDE1Q9NXR1 AC004792.1-201ENST00000614523 137 ntBASIC1.02□□□□□ -2.25
NDE1Q9NXR1 MIR4251-201ENST00000635819 61 ntBASIC1.02□□□□□ -2.25
NDE1Q9NXR1 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.01□□□□□ -2.25
NDE1Q9NXR1 MIR342-201ENST00000362212 99 ntBASIC1.01□□□□□ -2.25
NDE1Q9NXR1 RNU6-978P-201ENST00000364371 103 ntBASIC1.01□□□□□ -2.25
NDE1Q9NXR1 SNORA51.10-201ENST00000384418 136 ntBASIC1.01□□□□□ -2.25
NDE1Q9NXR1 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
NDE1Q9NXR1 RNU6-910P-201ENST00000390844 107 ntBASIC1.01□□□□□ -2.25
NDE1Q9NXR1 RNU7-120P-201ENST00000459334 63 ntBASIC1.01□□□□□ -2.25
NDE1Q9NXR1 AC243994.1-201ENST00000618627 109 ntBASIC1.01□□□□□ -2.25
NDE1Q9NXR1 AC134878.1-201ENST00000619901 243 ntBASIC1.01□□□□□ -2.25
NDE1Q9NXR1 SNORA1.2-201ENST00000365189 134 ntBASIC1□□□□□ -2.25
NDE1Q9NXR1 Y_RNA.521-201ENST00000384560 114 ntBASIC1□□□□□ -2.25
NDE1Q9NXR1 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1□□□□□ -2.25
NDE1Q9NXR1 SNORD116-25-201ENST00000516517 92 ntBASIC1□□□□□ -2.25
NDE1Q9NXR1 MIR4431-201ENST00000579990 94 ntBASIC1□□□□□ -2.25
NDE1Q9NXR1 MIR548AO-201ENST00000579992 96 ntBASIC1□□□□□ -2.25
NDE1Q9NXR1 MTND1P7-201ENST00000632801 297 ntBASIC1□□□□□ -2.25
NDE1Q9NXR1 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1□□□□□ -2.25
NDE1Q9NXR1 MIR103A2-201ENST00000362154 78 ntBASIC0.99□□□□□ -2.25
NDE1Q9NXR1 SNORD115-34-201ENST00000362441 82 ntBASIC0.99□□□□□ -2.25
NDE1Q9NXR1 SNORD115-12-201ENST00000362583 82 ntBASIC0.99□□□□□ -2.25
NDE1Q9NXR1 SNORD115-29-201ENST00000362834 82 ntBASIC0.99□□□□□ -2.25
NDE1Q9NXR1 SNORD115-9-201ENST00000362912 82 ntBASIC0.99□□□□□ -2.25
NDE1Q9NXR1 SNORD115-21-201ENST00000362963 81 ntBASIC0.99□□□□□ -2.25
NDE1Q9NXR1 SNORD115-14-201ENST00000363090 81 ntBASIC0.99□□□□□ -2.25
NDE1Q9NXR1 SNORD115-13-201ENST00000363358 82 ntBASIC0.99□□□□□ -2.25
NDE1Q9NXR1 SNORD115-41-201ENST00000363608 82 ntBASIC0.99□□□□□ -2.25
NDE1Q9NXR1 SNORD115-11-201ENST00000363616 82 ntBASIC0.99□□□□□ -2.25
NDE1Q9NXR1 SNORD115-5-201ENST00000363633 82 ntBASIC0.99□□□□□ -2.25
NDE1Q9NXR1 SNORD115-39-201ENST00000363694 82 ntBASIC0.99□□□□□ -2.25
NDE1Q9NXR1 SNORD115-4-201ENST00000363810 82 ntBASIC0.99□□□□□ -2.25
NDE1Q9NXR1 SNORD115-16-201ENST00000363887 82 ntBASIC0.99□□□□□ -2.25
NDE1Q9NXR1 SNORD115-6-201ENST00000363942 82 ntBASIC0.99□□□□□ -2.25
NDE1Q9NXR1 RNA5SP48-201ENST00000363969 126 ntBASIC0.99□□□□□ -2.25
NDE1Q9NXR1 SNORD115-42-201ENST00000364273 82 ntBASIC0.99□□□□□ -2.25
NDE1Q9NXR1 SNORD115-15-201ENST00000364809 81 ntBASIC0.99□□□□□ -2.25
NDE1Q9NXR1 SNORD115-1-201ENST00000364961 82 ntBASIC0.99□□□□□ -2.25
NDE1Q9NXR1 SNORD115-26-201ENST00000365067 82 ntBASIC0.99□□□□□ -2.25
NDE1Q9NXR1 SNORD115-10-201ENST00000365073 81 ntBASIC0.99□□□□□ -2.25
NDE1Q9NXR1 SNORD115-43-201ENST00000365503 82 ntBASIC0.99□□□□□ -2.25
NDE1Q9NXR1 SNORD115-36-201ENST00000365629 82 ntBASIC0.99□□□□□ -2.25
NDE1Q9NXR1 RNU6-1189P-201ENST00000383958 107 ntBASIC0.99□□□□□ -2.25
NDE1Q9NXR1 SNORA70.7-201ENST00000384159 133 ntBASIC0.99□□□□□ -2.25
NDE1Q9NXR1 Y_RNA.785-201ENST00000384290 109 ntBASIC0.99□□□□□ -2.25
NDE1Q9NXR1 RNU6-768P-201ENST00000384683 107 ntBASIC0.99□□□□□ -2.25
NDE1Q9NXR1 MIR222-201ENST00000384992 110 ntBASIC0.99□□□□□ -2.25
NDE1Q9NXR1 SNORA75.2-201ENST00000391138 150 ntBASIC0.99□□□□□ -2.25
NDE1Q9NXR1 SNORA75.3-201ENST00000391231 150 ntBASIC0.99□□□□□ -2.25
NDE1Q9NXR1 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.99□□□□□ -2.25
NDE1Q9NXR1 MIR1185-1-201ENST00000408598 86 ntBASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 138.2 ms