Protein–RNA interactions for Protein: Q9NUD5

ZCCHC3, Zinc finger CCHC domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 404 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC3Q9NUD5 SNORD18A-201ENST00000363753 72 ntBASIC0.46□□□□□ -2.34
ZCCHC3Q9NUD5 Y_RNA.216-201ENST00000364205 93 ntBASIC0.46□□□□□ -2.34
ZCCHC3Q9NUD5 Y_RNA.229-201ENST00000364347 113 ntBASIC0.46□□□□□ -2.34
ZCCHC3Q9NUD5 RNU6-867P-201ENST00000364956 107 ntBASIC0.46□□□□□ -2.34
ZCCHC3Q9NUD5 RNU4-45P-201ENST00000365469 141 ntBASIC0.46□□□□□ -2.34
ZCCHC3Q9NUD5 MIR626-201ENST00000385032 94 ntBASIC0.46□□□□□ -2.34
ZCCHC3Q9NUD5 MIR548J-201ENST00000408833 112 ntBASIC0.46□□□□□ -2.34
ZCCHC3Q9NUD5 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.46□□□□□ -2.34
ZCCHC3Q9NUD5 RNU7-56P-201ENST00000458744 62 ntBASIC0.46□□□□□ -2.34
ZCCHC3Q9NUD5 RNU6-1270P-201ENST00000517128 108 ntBASIC0.46□□□□□ -2.34
ZCCHC3Q9NUD5 AC020661.2-201ENST00000560114 134 ntBASIC0.46□□□□□ -2.34
ZCCHC3Q9NUD5 uc_338.6-201ENST00000613544 171 ntBASIC0.46□□□□□ -2.34
ZCCHC3Q9NUD5 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.46□□□□□ -2.34
ZCCHC3Q9NUD5 MIR18A-201ENST00000362310 71 ntBASIC0.45□□□□□ -2.34
ZCCHC3Q9NUD5 Y_RNA.66-201ENST00000362862 102 ntBASIC0.45□□□□□ -2.34
ZCCHC3Q9NUD5 RNA5SP499-201ENST00000363982 119 ntBASIC0.45□□□□□ -2.34
ZCCHC3Q9NUD5 Y_RNA.275-201ENST00000364726 110 ntBASIC0.45□□□□□ -2.34
ZCCHC3Q9NUD5 Y_RNA.572-201ENST00000384757 98 ntBASIC0.45□□□□□ -2.34
ZCCHC3Q9NUD5 RNU2-55P-201ENST00000411146 174 ntBASIC0.45□□□□□ -2.34
ZCCHC3Q9NUD5 MIR18B-201ENST00000454574 71 ntBASIC0.45□□□□□ -2.34
ZCCHC3Q9NUD5 RNU6-1338P-201ENST00000516328 91 ntBASIC0.45□□□□□ -2.34
ZCCHC3Q9NUD5 MIR3612-201ENST00000579753 87 ntBASIC0.45□□□□□ -2.34
ZCCHC3Q9NUD5 MIR151B-201ENST00000584249 96 ntBASIC0.45□□□□□ -2.34
ZCCHC3Q9NUD5 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.44□□□□□ -2.34
ZCCHC3Q9NUD5 RNA5SP347-201ENST00000362445 119 ntBASIC0.44□□□□□ -2.34
ZCCHC3Q9NUD5 SNORA1.1-201ENST00000364671 133 ntBASIC0.44□□□□□ -2.34
ZCCHC3Q9NUD5 RNU6-1289P-201ENST00000384431 106 ntBASIC0.44□□□□□ -2.34
ZCCHC3Q9NUD5 RNU6-1203P-201ENST00000410703 110 ntBASIC0.44□□□□□ -2.34
ZCCHC3Q9NUD5 RNU6-602P-201ENST00000411155 105 ntBASIC0.44□□□□□ -2.34
ZCCHC3Q9NUD5 HMGN1P33-201ENST00000432945 451 ntBASIC0.44□□□□□ -2.34
ZCCHC3Q9NUD5 MTND5P22-201ENST00000458380 195 ntBASIC0.44□□□□□ -2.34
ZCCHC3Q9NUD5 RNU7-96P-201ENST00000459535 64 ntBASIC0.44□□□□□ -2.34
ZCCHC3Q9NUD5 AC010332.2-201ENST00000613083 1904 ntBASIC0.44□□□□□ -2.34
ZCCHC3Q9NUD5 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.43□□□□□ -2.34
ZCCHC3Q9NUD5 RNU6-484P-201ENST00000384016 107 ntBASIC0.43□□□□□ -2.34
ZCCHC3Q9NUD5 MIR588-201ENST00000384900 83 ntBASIC0.43□□□□□ -2.34
ZCCHC3Q9NUD5 SNORA26-201ENST00000391286 122 ntBASIC0.43□□□□□ -2.34
ZCCHC3Q9NUD5 snoU13.2-201ENST00000459201 104 ntBASIC0.43□□□□□ -2.34
ZCCHC3Q9NUD5 RNU6-1299P-201ENST00000516316 100 ntBASIC0.43□□□□□ -2.34
ZCCHC3Q9NUD5 SCARNA24.2-201ENST00000516968 130 ntBASIC0.43□□□□□ -2.34
ZCCHC3Q9NUD5 RNU6-1137P-201ENST00000517073 99 ntBASIC0.43□□□□□ -2.34
ZCCHC3Q9NUD5 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.43□□□□□ -2.34
ZCCHC3Q9NUD5 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
ZCCHC3Q9NUD5 Y_RNA.202-201ENST00000364083 110 ntBASIC0.42□□□□□ -2.34
ZCCHC3Q9NUD5 SNORD77.3-201ENST00000391113 65 ntBASIC0.42□□□□□ -2.34
ZCCHC3Q9NUD5 MIR938-201ENST00000401216 83 ntBASIC0.42□□□□□ -2.34
ZCCHC3Q9NUD5 RNU6-1165P-201ENST00000410119 107 ntBASIC0.42□□□□□ -2.34
ZCCHC3Q9NUD5 AC113618.1-201ENST00000416747 285 ntBASIC0.42□□□□□ -2.34
ZCCHC3Q9NUD5 AC114737.2-201ENST00000421583 173 ntBASIC0.42□□□□□ -2.34
ZCCHC3Q9NUD5 AC092628.1-201ENST00000436250 252 ntBASIC0.42□□□□□ -2.34
ZCCHC3Q9NUD5 AF228730.3-201ENST00000436691 102 ntBASIC0.42□□□□□ -2.34
ZCCHC3Q9NUD5 RNU6-998P-201ENST00000515894 101 ntBASIC0.42□□□□□ -2.34
ZCCHC3Q9NUD5 RNU6-229P-201ENST00000516614 102 ntBASIC0.42□□□□□ -2.34
ZCCHC3Q9NUD5 MIR5000-201ENST00000577717 103 ntBASIC0.42□□□□□ -2.34
ZCCHC3Q9NUD5 Y_RNA.91-201ENST00000363042 107 ntBASIC0.41□□□□□ -2.34
ZCCHC3Q9NUD5 Y_RNA.634-201ENST00000364811 113 ntBASIC0.41□□□□□ -2.34
ZCCHC3Q9NUD5 Y_RNA.410-201ENST00000383992 113 ntBASIC0.41□□□□□ -2.34
ZCCHC3Q9NUD5 RNY3P5-201ENST00000384127 102 ntBASIC0.41□□□□□ -2.34
ZCCHC3Q9NUD5 MIR499A-201ENST00000384903 122 ntBASIC0.41□□□□□ -2.34
ZCCHC3Q9NUD5 MIR548I3-201ENST00000408378 149 ntBASIC0.41□□□□□ -2.34
ZCCHC3Q9NUD5 RNA5SP153-201ENST00000516498 76 ntBASIC0.41□□□□□ -2.34
ZCCHC3Q9NUD5 Y_RNA.44-201ENST00000362676 108 ntBASIC0.4□□□□□ -2.35
ZCCHC3Q9NUD5 RNU6-1189P-201ENST00000383958 107 ntBASIC0.4□□□□□ -2.35
ZCCHC3Q9NUD5 Y_RNA.432-201ENST00000384087 111 ntBASIC0.4□□□□□ -2.35
ZCCHC3Q9NUD5 Y_RNA.440-201ENST00000384120 114 ntBASIC0.4□□□□□ -2.35
ZCCHC3Q9NUD5 MIR563-201ENST00000385080 79 ntBASIC0.4□□□□□ -2.35
ZCCHC3Q9NUD5 MIR125B2-201ENST00000385128 89 ntBASIC0.4□□□□□ -2.35
ZCCHC3Q9NUD5 RNU6-985P-201ENST00000410182 104 ntBASIC0.4□□□□□ -2.35
ZCCHC3Q9NUD5 RNU2-70P-201ENST00000410718 179 ntBASIC0.4□□□□□ -2.35
ZCCHC3Q9NUD5 RNU6-1190P-201ENST00000410811 104 ntBASIC0.4□□□□□ -2.35
ZCCHC3Q9NUD5 AC098934.3-201ENST00000430450 190 ntBASIC0.4□□□□□ -2.35
ZCCHC3Q9NUD5 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.4□□□□□ -2.35
ZCCHC3Q9NUD5 RNU2-11P-201ENST00000459191 187 ntBASIC0.4□□□□□ -2.35
ZCCHC3Q9NUD5 SNORA68.3-201ENST00000515906 83 ntBASIC0.4□□□□□ -2.35
ZCCHC3Q9NUD5 AC097639.2-201ENST00000603159 172 ntBASIC0.4□□□□□ -2.35
ZCCHC3Q9NUD5 AL162730.1-201ENST00000605734 292 ntBASIC0.4□□□□□ -2.35
ZCCHC3Q9NUD5 Y_RNA.117-201ENST00000363294 101 ntBASIC0.39□□□□□ -2.35
ZCCHC3Q9NUD5 RNU6-1309P-201ENST00000363305 108 ntBASIC0.39□□□□□ -2.35
ZCCHC3Q9NUD5 RNU6-342P-201ENST00000384521 104 ntBASIC0.39□□□□□ -2.35
ZCCHC3Q9NUD5 SNORD100-201ENST00000408573 76 ntBASIC0.39□□□□□ -2.35
ZCCHC3Q9NUD5 AL138752.1-201ENST00000452964 351 ntBASIC0.39□□□□□ -2.35
ZCCHC3Q9NUD5 SNRPGP8-201ENST00000454064 226 ntBASIC0.39□□□□□ -2.35
ZCCHC3Q9NUD5 SNORD2.1-201ENST00000458762 69 ntBASIC0.39□□□□□ -2.35
ZCCHC3Q9NUD5 RNU7-185P-201ENST00000459215 60 ntBASIC0.39□□□□□ -2.35
ZCCHC3Q9NUD5 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.39□□□□□ -2.35
ZCCHC3Q9NUD5 AC090897.1-201ENST00000580909 226 ntBASIC0.39□□□□□ -2.35
ZCCHC3Q9NUD5 Y_RNA.224-201ENST00000364308 111 ntBASIC0.38□□□□□ -2.35
ZCCHC3Q9NUD5 RNU6-740P-201ENST00000364734 105 ntBASIC0.38□□□□□ -2.35
ZCCHC3Q9NUD5 SNORA33.2-201ENST00000365413 134 ntBASIC0.38□□□□□ -2.35
ZCCHC3Q9NUD5 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.38□□□□□ -2.35
ZCCHC3Q9NUD5 RNU6-364P-201ENST00000384387 107 ntBASIC0.38□□□□□ -2.35
ZCCHC3Q9NUD5 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.38□□□□□ -2.35
ZCCHC3Q9NUD5 MIR1257-201ENST00000408490 117 ntBASIC0.38□□□□□ -2.35
ZCCHC3Q9NUD5 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.38□□□□□ -2.35
ZCCHC3Q9NUD5 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.38□□□□□ -2.35
ZCCHC3Q9NUD5 RNU6-570P-201ENST00000517051 105 ntBASIC0.38□□□□□ -2.35
ZCCHC3Q9NUD5 AC008608.1-201ENST00000603910 127 ntBASIC0.38□□□□□ -2.35
ZCCHC3Q9NUD5 AP001282.2-201ENST00000616149 309 ntBASIC0.38□□□□□ -2.35
ZCCHC3Q9NUD5 MIRLET7D-201ENST00000362263 87 ntBASIC0.37□□□□□ -2.35
ZCCHC3Q9NUD5 Y_RNA.7-201ENST00000362352 102 ntBASIC0.37□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 227.2 ms