Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 RNU6-35P-201ENST00000384530 107 ntBASIC-0.09□□□□□ -2.42
TREX1Q9NSU2 RNU6-763P-201ENST00000390865 106 ntBASIC-0.09□□□□□ -2.42
TREX1Q9NSU2 RNU4-83P-201ENST00000410863 133 ntBASIC-0.09□□□□□ -2.42
TREX1Q9NSU2 Y_RNA.617-201ENST00000410920 90 ntBASIC-0.09□□□□□ -2.42
TREX1Q9NSU2 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.09□□□□□ -2.42
TREX1Q9NSU2 Y_RNA.713-201ENST00000517013 96 ntBASIC-0.09□□□□□ -2.42
TREX1Q9NSU2 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC-0.09□□□□□ -2.42
TREX1Q9NSU2 AC099654.14-201ENST00000638599 341 ntBASIC-0.09□□□□□ -2.42
TREX1Q9NSU2 MIR30D-201ENST00000362283 70 ntBASIC-0.1□□□□□ -2.43
TREX1Q9NSU2 SNORD114-5-201ENST00000362928 70 ntBASIC-0.1□□□□□ -2.43
TREX1Q9NSU2 RNU6-1138P-201ENST00000365359 106 ntBASIC-0.1□□□□□ -2.43
TREX1Q9NSU2 Y_RNA.387-201ENST00000383918 102 ntBASIC-0.1□□□□□ -2.43
TREX1Q9NSU2 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.1□□□□□ -2.43
TREX1Q9NSU2 Y_RNA.486-201ENST00000384398 107 ntBASIC-0.1□□□□□ -2.43
TREX1Q9NSU2 RNU6-1190P-201ENST00000410811 104 ntBASIC-0.1□□□□□ -2.43
TREX1Q9NSU2 RNU6-938P-201ENST00000411285 103 ntBASIC-0.1□□□□□ -2.43
TREX1Q9NSU2 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC-0.1□□□□□ -2.43
TREX1Q9NSU2 RNU7-129P-201ENST00000516128 62 ntBASIC-0.1□□□□□ -2.43
TREX1Q9NSU2 RNU6-191P-201ENST00000516295 94 ntBASIC-0.1□□□□□ -2.43
TREX1Q9NSU2 SNORD36C-201ENST00000516733 66 ntBASIC-0.1□□□□□ -2.43
TREX1Q9NSU2 SNORD113-5-201ENST00000607261 78 ntBASIC-0.1□□□□□ -2.43
TREX1Q9NSU2 AL138825.1-201ENST00000618587 192 ntBASIC-0.1□□□□□ -2.43
TREX1Q9NSU2 MIR342-201ENST00000362212 99 ntBASIC-0.11□□□□□ -2.43
TREX1Q9NSU2 SNORA72.1-201ENST00000363485 129 ntBASIC-0.11□□□□□ -2.43
TREX1Q9NSU2 MIR563-201ENST00000385080 79 ntBASIC-0.11□□□□□ -2.43
TREX1Q9NSU2 RNY4P36-201ENST00000391116 96 ntBASIC-0.11□□□□□ -2.43
TREX1Q9NSU2 RNA5SP496-201ENST00000391240 109 ntBASIC-0.11□□□□□ -2.43
TREX1Q9NSU2 PCNPP3-201ENST00000393579 471 ntBASIC-0.11□□□□□ -2.43
TREX1Q9NSU2 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.11□□□□□ -2.43
TREX1Q9NSU2 AC093783.1-201ENST00000612976 329 ntBASIC-0.11□□□□□ -2.43
TREX1Q9NSU2 AC084781.2-201ENST00000615568 161 ntBASIC-0.11□□□□□ -2.43
TREX1Q9NSU2 MIR367-201ENST00000362299 68 ntBASIC-0.12□□□□□ -2.43
TREX1Q9NSU2 RNU6-740P-201ENST00000364734 105 ntBASIC-0.12□□□□□ -2.43
TREX1Q9NSU2 Y_RNA.384-201ENST00000383909 102 ntBASIC-0.12□□□□□ -2.43
TREX1Q9NSU2 Y_RNA.471-201ENST00000384312 102 ntBASIC-0.12□□□□□ -2.43
TREX1Q9NSU2 SNORD77.3-201ENST00000391113 65 ntBASIC-0.12□□□□□ -2.43
TREX1Q9NSU2 MIR548I3-201ENST00000408378 149 ntBASIC-0.12□□□□□ -2.43
TREX1Q9NSU2 MIR1912-201ENST00000410389 80 ntBASIC-0.12□□□□□ -2.43
TREX1Q9NSU2 RNU2-11P-201ENST00000459191 187 ntBASIC-0.12□□□□□ -2.43
TREX1Q9NSU2 Y_RNA.655-201ENST00000515919 96 ntBASIC-0.12□□□□□ -2.43
TREX1Q9NSU2 Y_RNA.718-201ENST00000517110 102 ntBASIC-0.12□□□□□ -2.43
TREX1Q9NSU2 AC104985.2-201ENST00000620598 500 ntBASIC-0.12□□□□□ -2.43
TREX1Q9NSU2 Y_RNA.80-201ENST00000362996 102 ntBASIC-0.13□□□□□ -2.43
TREX1Q9NSU2 RNU6-403P-201ENST00000363163 104 ntBASIC-0.13□□□□□ -2.43
TREX1Q9NSU2 Y_RNA.274-201ENST00000364714 101 ntBASIC-0.13□□□□□ -2.43
TREX1Q9NSU2 Y_RNA.485-201ENST00000384395 102 ntBASIC-0.13□□□□□ -2.43
TREX1Q9NSU2 SNORD116-29-201ENST00000384516 83 ntBASIC-0.13□□□□□ -2.43
TREX1Q9NSU2 MIR610-201ENST00000385139 96 ntBASIC-0.13□□□□□ -2.43
TREX1Q9NSU2 RNA5SP237-201ENST00000410414 113 ntBASIC-0.13□□□□□ -2.43
TREX1Q9NSU2 SUMO1P3-201ENST00000439961 304 ntBASIC-0.13□□□□□ -2.43
TREX1Q9NSU2 FGF7P6-202ENST00000451282 293 ntBASIC-0.13□□□□□ -2.43
TREX1Q9NSU2 NDUFAF4P4-201ENST00000454883 502 ntBASIC-0.13□□□□□ -2.43
TREX1Q9NSU2 RNU6-764P-201ENST00000516396 105 ntBASIC-0.13□□□□□ -2.43
TREX1Q9NSU2 SNORA40.14-201ENST00000516543 86 ntBASIC-0.13□□□□□ -2.43
TREX1Q9NSU2 RNU6-1270P-201ENST00000517128 108 ntBASIC-0.13□□□□□ -2.43
TREX1Q9NSU2 AC100767.1-201ENST00000528178 123 ntBASIC-0.13□□□□□ -2.43
TREX1Q9NSU2 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.13□□□□□ -2.43
TREX1Q9NSU2 MIR4724-201ENST00000579485 89 ntBASIC-0.13□□□□□ -2.43
TREX1Q9NSU2 MIR4662B-201ENST00000579498 81 ntBASIC-0.13□□□□□ -2.43
TREX1Q9NSU2 AL021707.8-201ENST00000609428 183 ntBASIC-0.13□□□□□ -2.43
TREX1Q9NSU2 MIR8066-201ENST00000617280 78 ntBASIC-0.13□□□□□ -2.43
TREX1Q9NSU2 RNU6-1115P-201ENST00000362490 106 ntBASIC-0.14□□□□□ -2.43
TREX1Q9NSU2 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.14□□□□□ -2.43
TREX1Q9NSU2 SNORA32.1-201ENST00000364514 115 ntBASIC-0.14□□□□□ -2.43
TREX1Q9NSU2 Y_RNA.293-201ENST00000364908 93 ntBASIC-0.14□□□□□ -2.43
TREX1Q9NSU2 RNU6V-201ENST00000384105 107 ntBASIC-0.14□□□□□ -2.43
TREX1Q9NSU2 SNORD61-201ENST00000384252 73 ntBASIC-0.14□□□□□ -2.43
TREX1Q9NSU2 Y_RNA.496-201ENST00000384444 101 ntBASIC-0.14□□□□□ -2.43
TREX1Q9NSU2 Y_RNA.526-201ENST00000384572 110 ntBASIC-0.14□□□□□ -2.43
TREX1Q9NSU2 MIR643-201ENST00000385267 97 ntBASIC-0.14□□□□□ -2.43
TREX1Q9NSU2 Y_RNA.587-201ENST00000391210 103 ntBASIC-0.14□□□□□ -2.43
TREX1Q9NSU2 Z95118.1-201ENST00000421372 247 ntBASIC-0.14□□□□□ -2.43
TREX1Q9NSU2 RNU7-96P-201ENST00000459535 64 ntBASIC-0.14□□□□□ -2.43
TREX1Q9NSU2 MRPS35P2-201ENST00000508242 191 ntBASIC-0.14□□□□□ -2.43
TREX1Q9NSU2 AC141557.1-201ENST00000540982 400 ntBASIC-0.14□□□□□ -2.43
TREX1Q9NSU2 MIR7107-201ENST00000611489 80 ntBASIC-0.14□□□□□ -2.43
TREX1Q9NSU2 AC092794.1-201ENST00000612734 582 ntBASIC-0.14□□□□□ -2.43
TREX1Q9NSU2 MIR6755-201ENST00000619993 66 ntBASIC-0.14□□□□□ -2.43
TREX1Q9NSU2 AL606534.2-204ENST00000635008 178 ntBASIC-0.14□□□□□ -2.43
TREX1Q9NSU2 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC-0.15□□□□□ -2.43
TREX1Q9NSU2 MIR302B-201ENST00000362188 73 ntBASIC-0.15□□□□□ -2.43
TREX1Q9NSU2 Y_RNA.13-201ENST00000362403 112 ntBASIC-0.15□□□□□ -2.43
TREX1Q9NSU2 Y_RNA.42-201ENST00000362660 108 ntBASIC-0.15□□□□□ -2.43
TREX1Q9NSU2 RNA5SP98-201ENST00000363158 137 ntBASIC-0.15□□□□□ -2.43
TREX1Q9NSU2 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.15□□□□□ -2.43
TREX1Q9NSU2 RNU6-302P-201ENST00000365249 107 ntBASIC-0.15□□□□□ -2.43
TREX1Q9NSU2 Y_RNA.418-201ENST00000384029 102 ntBASIC-0.15□□□□□ -2.43
TREX1Q9NSU2 SNORD77.4-201ENST00000516158 81 ntBASIC-0.15□□□□□ -2.43
TREX1Q9NSU2 RNU6-365P-201ENST00000517113 106 ntBASIC-0.15□□□□□ -2.43
TREX1Q9NSU2 AP001282.2-201ENST00000616149 309 ntBASIC-0.15□□□□□ -2.43
TREX1Q9NSU2 AC013791.1-201ENST00000616619 62 ntBASIC-0.15□□□□□ -2.43
TREX1Q9NSU2 Y_RNA.187-201ENST00000363918 113 ntBASIC-0.16□□□□□ -2.44
TREX1Q9NSU2 RNU6-187P-201ENST00000384139 106 ntBASIC-0.16□□□□□ -2.44
TREX1Q9NSU2 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-0.16□□□□□ -2.44
TREX1Q9NSU2 Y_RNA.602-201ENST00000410535 92 ntBASIC-0.16□□□□□ -2.44
TREX1Q9NSU2 RNU6-998P-201ENST00000515894 101 ntBASIC-0.16□□□□□ -2.44
TREX1Q9NSU2 SNORA20.3-201ENST00000516880 132 ntBASIC-0.16□□□□□ -2.44
TREX1Q9NSU2 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC-0.16□□□□□ -2.44
TREX1Q9NSU2 MIR5589-201ENST00000579442 60 ntBASIC-0.16□□□□□ -2.44
TREX1Q9NSU2 AL360085.1-201ENST00000604713 532 ntBASIC-0.16□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 9 ms