Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 SNORA50A-201ENST00000384225 134 ntBASIC0.33□□□□□ -2.36
HMG20AQ9NP66 Y_RNA.455-201ENST00000384230 98 ntBASIC0.33□□□□□ -2.36
HMG20AQ9NP66 SNORA27-201ENST00000384323 126 ntBASIC0.33□□□□□ -2.36
HMG20AQ9NP66 SNORA53-201ENST00000391141 249 ntBASIC0.33□□□□□ -2.36
HMG20AQ9NP66 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.33□□□□□ -2.36
HMG20AQ9NP66 AF228730.3-201ENST00000436691 102 ntBASIC0.33□□□□□ -2.36
HMG20AQ9NP66 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.33□□□□□ -2.36
HMG20AQ9NP66 AC100767.1-201ENST00000528178 123 ntBASIC0.33□□□□□ -2.36
HMG20AQ9NP66 AP003733.2-201ENST00000529409 171 ntBASIC0.33□□□□□ -2.36
HMG20AQ9NP66 MIR4680-201ENST00000580906 66 ntBASIC0.33□□□□□ -2.36
HMG20AQ9NP66 MIR3171-201ENST00000584270 74 ntBASIC0.33□□□□□ -2.36
HMG20AQ9NP66 AC006006.1-201ENST00000603082 144 ntBASIC0.33□□□□□ -2.36
HMG20AQ9NP66 AL162730.1-201ENST00000605734 292 ntBASIC0.33□□□□□ -2.36
HMG20AQ9NP66 Y_RNA.802-201ENST00000614892 130 ntBASIC0.33□□□□□ -2.36
HMG20AQ9NP66 Y_RNA.91-201ENST00000363042 107 ntBASIC0.32□□□□□ -2.36
HMG20AQ9NP66 Y_RNA.128-201ENST00000363391 112 ntBASIC0.32□□□□□ -2.36
HMG20AQ9NP66 Y_RNA.158-201ENST00000363651 101 ntBASIC0.32□□□□□ -2.36
HMG20AQ9NP66 SNORD38B-201ENST00000384690 67 ntBASIC0.32□□□□□ -2.36
HMG20AQ9NP66 MIR588-201ENST00000384900 83 ntBASIC0.32□□□□□ -2.36
HMG20AQ9NP66 SNORD12C-201ENST00000386307 89 ntBASIC0.32□□□□□ -2.36
HMG20AQ9NP66 MT-TT-201ENST00000387460 66 ntBASIC0.32□□□□□ -2.36
HMG20AQ9NP66 SNORA40.5-201ENST00000391061 128 ntBASIC0.32□□□□□ -2.36
HMG20AQ9NP66 RNU6-651P-201ENST00000411040 105 ntBASIC0.32□□□□□ -2.36
HMG20AQ9NP66 RNU6-602P-201ENST00000411155 105 ntBASIC0.32□□□□□ -2.36
HMG20AQ9NP66 AC087499.4-201ENST00000448505 178 ntBASIC0.32□□□□□ -2.36
HMG20AQ9NP66 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.32□□□□□ -2.36
HMG20AQ9NP66 RNU7-73P-201ENST00000458743 63 ntBASIC0.32□□□□□ -2.36
HMG20AQ9NP66 snoU13.18-201ENST00000459483 104 ntBASIC0.32□□□□□ -2.36
HMG20AQ9NP66 SNORD38B-202ENST00000625943 69 ntBASIC0.32□□□□□ -2.36
HMG20AQ9NP66 AC134503.1-201ENST00000633048 54 ntBASIC0.32□□□□□ -2.36
HMG20AQ9NP66 Z97988.1-201ENST00000637697 135 ntBASIC0.32□□□□□ -2.36
HMG20AQ9NP66 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.31□□□□□ -2.36
HMG20AQ9NP66 Y_RNA.66-201ENST00000362862 102 ntBASIC0.31□□□□□ -2.36
HMG20AQ9NP66 RNU6-1289P-201ENST00000384431 106 ntBASIC0.31□□□□□ -2.36
HMG20AQ9NP66 Y_RNA.535-201ENST00000384612 99 ntBASIC0.31□□□□□ -2.36
HMG20AQ9NP66 MIR526A2-201ENST00000390198 65 ntBASIC0.31□□□□□ -2.36
HMG20AQ9NP66 RNU6-679P-201ENST00000391003 106 ntBASIC0.31□□□□□ -2.36
HMG20AQ9NP66 MIR548P-201ENST00000408336 84 ntBASIC0.31□□□□□ -2.36
HMG20AQ9NP66 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.31□□□□□ -2.36
HMG20AQ9NP66 RNU7-45P-201ENST00000459460 63 ntBASIC0.31□□□□□ -2.36
HMG20AQ9NP66 RPS29P24-201ENST00000486345 171 ntBASIC0.31□□□□□ -2.36
HMG20AQ9NP66 RNU6-570P-201ENST00000517051 105 ntBASIC0.31□□□□□ -2.36
HMG20AQ9NP66 AC020661.2-201ENST00000560114 134 ntBASIC0.31□□□□□ -2.36
HMG20AQ9NP66 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.3□□□□□ -2.36
HMG20AQ9NP66 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.3□□□□□ -2.36
HMG20AQ9NP66 MIR342-201ENST00000362212 99 ntBASIC0.3□□□□□ -2.36
HMG20AQ9NP66 Y_RNA.7-201ENST00000362352 102 ntBASIC0.3□□□□□ -2.36
HMG20AQ9NP66 RNU6-888P-201ENST00000363010 101 ntBASIC0.3□□□□□ -2.36
HMG20AQ9NP66 Y_RNA.152-201ENST00000363578 100 ntBASIC0.3□□□□□ -2.36
HMG20AQ9NP66 RNU1-133P-201ENST00000364867 167 ntBASIC0.3□□□□□ -2.36
HMG20AQ9NP66 RNU5E-4P-201ENST00000364931 120 ntBASIC0.3□□□□□ -2.36
HMG20AQ9NP66 SNORD24-201ENST00000383884 75 ntBASIC0.3□□□□□ -2.36
HMG20AQ9NP66 Y_RNA.460-201ENST00000384255 102 ntBASIC0.3□□□□□ -2.36
HMG20AQ9NP66 RNU6-1228P-201ENST00000391014 107 ntBASIC0.3□□□□□ -2.36
HMG20AQ9NP66 RNU6-1165P-201ENST00000410119 107 ntBASIC0.3□□□□□ -2.36
HMG20AQ9NP66 Y_RNA.622-201ENST00000411091 108 ntBASIC0.3□□□□□ -2.36
HMG20AQ9NP66 AL731563.1-201ENST00000442202 214 ntBASIC0.3□□□□□ -2.36
HMG20AQ9NP66 RNU6-1338P-201ENST00000516328 91 ntBASIC0.3□□□□□ -2.36
HMG20AQ9NP66 RNU6-365P-201ENST00000517113 106 ntBASIC0.3□□□□□ -2.36
HMG20AQ9NP66 MIR4662B-201ENST00000579498 81 ntBASIC0.3□□□□□ -2.36
HMG20AQ9NP66 SNORA4-201ENST00000584302 138 ntBASIC0.3□□□□□ -2.36
HMG20AQ9NP66 AC037487.3-201ENST00000606668 112 ntBASIC0.3□□□□□ -2.36
HMG20AQ9NP66 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.3□□□□□ -2.36
HMG20AQ9NP66 MIR6513-201ENST00000621188 64 ntBASIC0.3□□□□□ -2.36
HMG20AQ9NP66 MIR376A2-201ENST00000636782 80 ntBASIC0.3□□□□□ -2.36
HMG20AQ9NP66 Y_RNA.61-201ENST00000362835 102 ntBASIC0.29□□□□□ -2.36
HMG20AQ9NP66 SNORA1.1-201ENST00000364671 133 ntBASIC0.29□□□□□ -2.36
HMG20AQ9NP66 Y_RNA.276-201ENST00000364732 109 ntBASIC0.29□□□□□ -2.36
HMG20AQ9NP66 RNU6-867P-201ENST00000364956 107 ntBASIC0.29□□□□□ -2.36
HMG20AQ9NP66 SNORA8.3-201ENST00000384679 139 ntBASIC0.29□□□□□ -2.36
HMG20AQ9NP66 MIR626-201ENST00000385032 94 ntBASIC0.29□□□□□ -2.36
HMG20AQ9NP66 RNU6-1203P-201ENST00000410703 110 ntBASIC0.29□□□□□ -2.36
HMG20AQ9NP66 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.29□□□□□ -2.36
HMG20AQ9NP66 SNRPGP8-201ENST00000454064 226 ntBASIC0.29□□□□□ -2.36
HMG20AQ9NP66 RNU7-102P-201ENST00000458948 62 ntBASIC0.29□□□□□ -2.36
HMG20AQ9NP66 RNU2-11P-201ENST00000459191 187 ntBASIC0.29□□□□□ -2.36
HMG20AQ9NP66 snoU13.2-201ENST00000459201 104 ntBASIC0.29□□□□□ -2.36
HMG20AQ9NP66 RNU7-185P-201ENST00000459215 60 ntBASIC0.29□□□□□ -2.36
HMG20AQ9NP66 SERF1AP1-201ENST00000514575 187 ntBASIC0.29□□□□□ -2.36
HMG20AQ9NP66 RN7SKP12-201ENST00000516275 143 ntBASIC0.29□□□□□ -2.36
HMG20AQ9NP66 RNU6-453P-201ENST00000516819 85 ntBASIC0.29□□□□□ -2.36
HMG20AQ9NP66 Z83818.1-201ENST00000603584 150 ntBASIC0.29□□□□□ -2.36
HMG20AQ9NP66 AC243829.3-201ENST00000622177 108 ntBASIC0.29□□□□□ -2.36
HMG20AQ9NP66 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.28□□□□□ -2.36
HMG20AQ9NP66 UBE2WP1-201ENST00000362030 340 ntBASIC0.28□□□□□ -2.36
HMG20AQ9NP66 MIRLET7D-201ENST00000362263 87 ntBASIC0.28□□□□□ -2.36
HMG20AQ9NP66 snoU2_19.4-201ENST00000364329 80 ntBASIC0.28□□□□□ -2.36
HMG20AQ9NP66 RNU6-740P-201ENST00000364734 105 ntBASIC0.28□□□□□ -2.36
HMG20AQ9NP66 Y_RNA.634-201ENST00000364811 113 ntBASIC0.28□□□□□ -2.36
HMG20AQ9NP66 RNU6-597P-201ENST00000365620 102 ntBASIC0.28□□□□□ -2.36
HMG20AQ9NP66 RNU6-484P-201ENST00000384016 107 ntBASIC0.28□□□□□ -2.36
HMG20AQ9NP66 SNORA1-201ENST00000384107 130 ntBASIC0.28□□□□□ -2.36
HMG20AQ9NP66 Y_RNA.512-201ENST00000384518 102 ntBASIC0.28□□□□□ -2.36
HMG20AQ9NP66 MIR938-201ENST00000401216 83 ntBASIC0.28□□□□□ -2.36
HMG20AQ9NP66 AC002350.1-201ENST00000490759 375 ntBASIC0.28□□□□□ -2.36
HMG20AQ9NP66 RNU7-53P-201ENST00000516705 60 ntBASIC0.28□□□□□ -2.36
HMG20AQ9NP66 MIR6515-201ENST00000619843 57 ntBASIC0.28□□□□□ -2.36
HMG20AQ9NP66 MIR30D-201ENST00000362283 70 ntBASIC0.27□□□□□ -2.37
HMG20AQ9NP66 RNA5SP517-201ENST00000364724 117 ntBASIC0.27□□□□□ -2.37
HMG20AQ9NP66 Y_RNA.275-201ENST00000364726 110 ntBASIC0.27□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 177.6 ms