Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 RNU1-138P-201ENST00000384093 164 ntBASIC2.63□□□□□ -1.99
ZFYVE28Q9HCC9 SNORA67.3-201ENST00000384366 140 ntBASIC2.63□□□□□ -1.99
ZFYVE28Q9HCC9 MIR548D2-201ENST00000384955 97 ntBASIC2.63□□□□□ -1.99
ZFYVE28Q9HCC9 RNA5SP144-201ENST00000410846 116 ntBASIC2.63□□□□□ -1.99
ZFYVE28Q9HCC9 RNU6-893P-201ENST00000458841 100 ntBASIC2.63□□□□□ -1.99
ZFYVE28Q9HCC9 RNU7-67P-201ENST00000459003 62 ntBASIC2.63□□□□□ -1.99
ZFYVE28Q9HCC9 Y_RNA.677-201ENST00000516401 85 ntBASIC2.63□□□□□ -1.99
ZFYVE28Q9HCC9 AC022523.2-201ENST00000561045 150 ntBASIC2.63□□□□□ -1.99
ZFYVE28Q9HCC9 MIR4529-201ENST00000578110 78 ntBASIC2.63□□□□□ -1.99
ZFYVE28Q9HCC9 MIR3152-201ENST00000579801 74 ntBASIC2.63□□□□□ -1.99
ZFYVE28Q9HCC9 AP000942.3-201ENST00000603702 160 ntBASIC2.63□□□□□ -1.99
ZFYVE28Q9HCC9 AC067747.1-201ENST00000608026 250 ntBASIC2.63□□□□□ -1.99
ZFYVE28Q9HCC9 AC010297.1-201ENST00000623948 149 ntBASIC2.63□□□□□ -1.99
ZFYVE28Q9HCC9 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
ZFYVE28Q9HCC9 RNU1-52P-201ENST00000384190 164 ntBASIC2.62□□□□□ -1.99
ZFYVE28Q9HCC9 RNU6-1067P-201ENST00000384752 107 ntBASIC2.62□□□□□ -1.99
ZFYVE28Q9HCC9 MIR221-201ENST00000385135 110 ntBASIC2.62□□□□□ -1.99
ZFYVE28Q9HCC9 AC099513.1-201ENST00000490423 301 ntBASIC2.62□□□□□ -1.99
ZFYVE28Q9HCC9 RNU7-53P-201ENST00000516705 60 ntBASIC2.62□□□□□ -1.99
ZFYVE28Q9HCC9 RNU7-6P-201ENST00000516845 62 ntBASIC2.62□□□□□ -1.99
ZFYVE28Q9HCC9 RNU6-958P-201ENST00000516995 106 ntBASIC2.62□□□□□ -1.99
ZFYVE28Q9HCC9 SNORA31.25-201ENST00000517242 134 ntBASIC2.62□□□□□ -1.99
ZFYVE28Q9HCC9 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.62□□□□□ -1.99
ZFYVE28Q9HCC9 AC068339.1-201ENST00000526965 141 ntBASIC2.62□□□□□ -1.99
ZFYVE28Q9HCC9 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.62□□□□□ -1.99
ZFYVE28Q9HCC9 MIR424-201ENST00000362227 98 ntBASIC2.61□□□□□ -1.99
ZFYVE28Q9HCC9 RNA5SP393-201ENST00000363423 117 ntBASIC2.61□□□□□ -1.99
ZFYVE28Q9HCC9 SNORA3A-201ENST00000364113 130 ntBASIC2.61□□□□□ -1.99
ZFYVE28Q9HCC9 U8.6-201ENST00000364939 135 ntBASIC2.61□□□□□ -1.99
ZFYVE28Q9HCC9 Y_RNA.328-201ENST00000365208 113 ntBASIC2.61□□□□□ -1.99
ZFYVE28Q9HCC9 RNU6-360P-201ENST00000390944 104 ntBASIC2.61□□□□□ -1.99
ZFYVE28Q9HCC9 SNORA26.9-201ENST00000391322 122 ntBASIC2.61□□□□□ -1.99
ZFYVE28Q9HCC9 RNA5SP100-201ENST00000410903 110 ntBASIC2.61□□□□□ -1.99
ZFYVE28Q9HCC9 RNA5SP59-201ENST00000410922 110 ntBASIC2.61□□□□□ -1.99
ZFYVE28Q9HCC9 RNA5SP450-201ENST00000411206 102 ntBASIC2.61□□□□□ -1.99
ZFYVE28Q9HCC9 RPS29P29-201ENST00000456396 171 ntBASIC2.61□□□□□ -1.99
ZFYVE28Q9HCC9 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.61□□□□□ -1.99
ZFYVE28Q9HCC9 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.61□□□□□ -1.99
ZFYVE28Q9HCC9 MIR5009-201ENST00000578736 100 ntBASIC2.61□□□□□ -1.99
ZFYVE28Q9HCC9 MIR5194-201ENST00000582634 120 ntBASIC2.61□□□□□ -1.99
ZFYVE28Q9HCC9 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.61□□□□□ -1.99
ZFYVE28Q9HCC9 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.61□□□□□ -1.99
ZFYVE28Q9HCC9 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.61□□□□□ -1.99
ZFYVE28Q9HCC9 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
ZFYVE28Q9HCC9 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
ZFYVE28Q9HCC9 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
ZFYVE28Q9HCC9 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.6□□□□□ -1.99
ZFYVE28Q9HCC9 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
ZFYVE28Q9HCC9 Y_RNA.344-201ENST00000365381 112 ntBASIC2.6□□□□□ -1.99
ZFYVE28Q9HCC9 RNU6-1319P-201ENST00000390855 104 ntBASIC2.6□□□□□ -1.99
ZFYVE28Q9HCC9 RNU6-747P-201ENST00000390928 104 ntBASIC2.6□□□□□ -1.99
ZFYVE28Q9HCC9 RNU6-241P-201ENST00000391148 104 ntBASIC2.6□□□□□ -1.99
ZFYVE28Q9HCC9 RNU6-177P-201ENST00000411257 104 ntBASIC2.6□□□□□ -1.99
ZFYVE28Q9HCC9 SNORD123-201ENST00000459473 70 ntBASIC2.6□□□□□ -1.99
ZFYVE28Q9HCC9 SNORA31.4-201ENST00000516049 129 ntBASIC2.6□□□□□ -1.99
ZFYVE28Q9HCC9 SNORA31.15-201ENST00000516771 132 ntBASIC2.6□□□□□ -1.99
ZFYVE28Q9HCC9 AC004812.1-201ENST00000540773 146 ntBASIC2.6□□□□□ -1.99
ZFYVE28Q9HCC9 MIR548AR-201ENST00000582191 57 ntBASIC2.6□□□□□ -1.99
ZFYVE28Q9HCC9 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
ZFYVE28Q9HCC9 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.6□□□□□ -1.99
ZFYVE28Q9HCC9 AC080100.1-201ENST00000624239 5356 ntBASIC2.59□□□□□ -1.99
ZFYVE28Q9HCC9 Y_RNA.531-201ENST00000384589 121 ntBASIC2.59□□□□□ -1.99
ZFYVE28Q9HCC9 U8.13-201ENST00000390842 128 ntBASIC2.59□□□□□ -1.99
ZFYVE28Q9HCC9 RNA5SP261-201ENST00000410536 106 ntBASIC2.59□□□□□ -1.99
ZFYVE28Q9HCC9 AL512326.2-201ENST00000426359 151 ntBASIC2.59□□□□□ -1.99
ZFYVE28Q9HCC9 RNU7-193P-201ENST00000516723 65 ntBASIC2.59□□□□□ -1.99
ZFYVE28Q9HCC9 AL049779.4-201ENST00000604500 156 ntBASIC2.59□□□□□ -1.99
ZFYVE28Q9HCC9 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.59□□□□□ -1.99
ZFYVE28Q9HCC9 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
ZFYVE28Q9HCC9 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
ZFYVE28Q9HCC9 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
ZFYVE28Q9HCC9 DEFA7P-201ENST00000382676 285 ntBASIC2.58□□□□□ -2
ZFYVE28Q9HCC9 MIR526A1-201ENST00000384897 85 ntBASIC2.58□□□□□ -2
ZFYVE28Q9HCC9 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.58□□□□□ -2
ZFYVE28Q9HCC9 FAM106DP-201ENST00000586416 501 ntBASIC2.58□□□□□ -2
ZFYVE28Q9HCC9 AC006254.2-201ENST00000603259 279 ntBASIC2.58□□□□□ -2
ZFYVE28Q9HCC9 AC245884.12-201ENST00000615364 59 ntBASIC2.58□□□□□ -2
ZFYVE28Q9HCC9 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.58□□□□□ -2
ZFYVE28Q9HCC9 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
ZFYVE28Q9HCC9 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.58□□□□□ -2
ZFYVE28Q9HCC9 Y_RNA.299-201ENST00000364973 94 ntBASIC2.57□□□□□ -2
ZFYVE28Q9HCC9 AL023284.1-201ENST00000403956 276 ntBASIC2.57□□□□□ -2
ZFYVE28Q9HCC9 POLR2J4-204ENST00000418424 324 ntBASIC2.57□□□□□ -2
ZFYVE28Q9HCC9 RNU7-45P-201ENST00000459460 63 ntBASIC2.57□□□□□ -2
ZFYVE28Q9HCC9 RNU2-13P-201ENST00000515909 113 ntBASIC2.57□□□□□ -2
ZFYVE28Q9HCC9 DNAJC19P9-201ENST00000555084 351 ntBASIC2.57□□□□□ -2
ZFYVE28Q9HCC9 AC243994.1-201ENST00000618627 109 ntBASIC2.57□□□□□ -2
ZFYVE28Q9HCC9 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.57□□□□□ -2
ZFYVE28Q9HCC9 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
ZFYVE28Q9HCC9 SNORA24-201ENST00000384096 131 ntBASIC2.56□□□□□ -2
ZFYVE28Q9HCC9 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.56□□□□□ -2
ZFYVE28Q9HCC9 SNORD28B-201ENST00000390993 75 ntBASIC2.56□□□□□ -2
ZFYVE28Q9HCC9 RPS23P4-201ENST00000487908 423 ntBASIC2.56□□□□□ -2
ZFYVE28Q9HCC9 AC108729.3-201ENST00000513484 108 ntBASIC2.56□□□□□ -2
ZFYVE28Q9HCC9 RNA5SP82-201ENST00000516707 92 ntBASIC2.56□□□□□ -2
ZFYVE28Q9HCC9 SNORA31.17-201ENST00000516953 127 ntBASIC2.56□□□□□ -2
ZFYVE28Q9HCC9 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.56□□□□□ -2
ZFYVE28Q9HCC9 MIR6132-201ENST00000622083 109 ntBASIC2.56□□□□□ -2
ZFYVE28Q9HCC9 AL162726.3-218ENST00000636401 95 ntBASIC2.56□□□□□ -2
ZFYVE28Q9HCC9 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms