Protein–RNA interactions for Protein: Q9H9Y2

RPF1, Ribosome production factor 1, humanhuman

Known RBP Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1Q9H9Y2 SNORD115-9-201ENST00000362912 82 ntBASIC0.8□□□□□ -2.28
RPF1Q9H9Y2 Y_RNA.76-201ENST00000362931 109 ntBASIC0.8□□□□□ -2.28
RPF1Q9H9Y2 SNORD115-21-201ENST00000362963 81 ntBASIC0.8□□□□□ -2.28
RPF1Q9H9Y2 SNORD115-14-201ENST00000363090 81 ntBASIC0.8□□□□□ -2.28
RPF1Q9H9Y2 RNU6-1309P-201ENST00000363305 108 ntBASIC0.8□□□□□ -2.28
RPF1Q9H9Y2 SNORD115-13-201ENST00000363358 82 ntBASIC0.8□□□□□ -2.28
RPF1Q9H9Y2 SNORD115-41-201ENST00000363608 82 ntBASIC0.8□□□□□ -2.28
RPF1Q9H9Y2 SNORD115-11-201ENST00000363616 82 ntBASIC0.8□□□□□ -2.28
RPF1Q9H9Y2 SNORD115-5-201ENST00000363633 82 ntBASIC0.8□□□□□ -2.28
RPF1Q9H9Y2 SNORD115-39-201ENST00000363694 82 ntBASIC0.8□□□□□ -2.28
RPF1Q9H9Y2 SNORD115-4-201ENST00000363810 82 ntBASIC0.8□□□□□ -2.28
RPF1Q9H9Y2 SNORD45.3-201ENST00000363836 72 ntBASIC0.8□□□□□ -2.28
RPF1Q9H9Y2 SNORD115-16-201ENST00000363887 82 ntBASIC0.8□□□□□ -2.28
RPF1Q9H9Y2 SNORD115-6-201ENST00000363942 82 ntBASIC0.8□□□□□ -2.28
RPF1Q9H9Y2 SNORD115-42-201ENST00000364273 82 ntBASIC0.8□□□□□ -2.28
RPF1Q9H9Y2 SNORD113.3-201ENST00000364630 78 ntBASIC0.8□□□□□ -2.28
RPF1Q9H9Y2 SNORD115-15-201ENST00000364809 81 ntBASIC0.8□□□□□ -2.28
RPF1Q9H9Y2 SNORD115-1-201ENST00000364961 82 ntBASIC0.8□□□□□ -2.28
RPF1Q9H9Y2 Y_RNA.304-201ENST00000365011 112 ntBASIC0.8□□□□□ -2.28
RPF1Q9H9Y2 SNORD115-26-201ENST00000365067 82 ntBASIC0.8□□□□□ -2.28
RPF1Q9H9Y2 SNORD115-10-201ENST00000365073 81 ntBASIC0.8□□□□□ -2.28
RPF1Q9H9Y2 SNORD115-43-201ENST00000365503 82 ntBASIC0.8□□□□□ -2.28
RPF1Q9H9Y2 SNORD115-36-201ENST00000365629 82 ntBASIC0.8□□□□□ -2.28
RPF1Q9H9Y2 SNORD24-201ENST00000383884 75 ntBASIC0.8□□□□□ -2.28
RPF1Q9H9Y2 Y_RNA.416-201ENST00000384014 113 ntBASIC0.8□□□□□ -2.28
RPF1Q9H9Y2 RNU6-125P-201ENST00000384505 107 ntBASIC0.8□□□□□ -2.28
RPF1Q9H9Y2 RNU2-38P-201ENST00000410856 79 ntBASIC0.8□□□□□ -2.28
RPF1Q9H9Y2 Y_RNA.622-201ENST00000411091 108 ntBASIC0.8□□□□□ -2.28
RPF1Q9H9Y2 Y_RNA.679-201ENST00000516416 91 ntBASIC0.8□□□□□ -2.28
RPF1Q9H9Y2 MIR2115-201ENST00000516657 100 ntBASIC0.8□□□□□ -2.28
RPF1Q9H9Y2 SNORD36C-201ENST00000516733 66 ntBASIC0.8□□□□□ -2.28
RPF1Q9H9Y2 AC011921.3-201ENST00000605540 361 ntBASIC0.8□□□□□ -2.28
RPF1Q9H9Y2 SNORD115-40-201ENST00000606510 82 ntBASIC0.8□□□□□ -2.28
RPF1Q9H9Y2 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.8□□□□□ -2.28
RPF1Q9H9Y2 RNU6-888P-201ENST00000363010 101 ntBASIC0.79□□□□□ -2.28
RPF1Q9H9Y2 RNU6-653P-201ENST00000363074 106 ntBASIC0.79□□□□□ -2.28
RPF1Q9H9Y2 Y_RNA.277-201ENST00000364754 102 ntBASIC0.79□□□□□ -2.28
RPF1Q9H9Y2 Y_RNA.634-201ENST00000364811 113 ntBASIC0.79□□□□□ -2.28
RPF1Q9H9Y2 RNU6-396P-201ENST00000365369 105 ntBASIC0.79□□□□□ -2.28
RPF1Q9H9Y2 SNORA2B-201ENST00000384583 137 ntBASIC0.79□□□□□ -2.28
RPF1Q9H9Y2 AL606845.1-201ENST00000404881 255 ntBASIC0.79□□□□□ -2.28
RPF1Q9H9Y2 SNORD111-201ENST00000408139 94 ntBASIC0.79□□□□□ -2.28
RPF1Q9H9Y2 AF228730.3-201ENST00000436691 102 ntBASIC0.79□□□□□ -2.28
RPF1Q9H9Y2 AC087499.4-201ENST00000448505 178 ntBASIC0.79□□□□□ -2.28
RPF1Q9H9Y2 AP003484.1-201ENST00000530974 250 ntBASIC0.79□□□□□ -2.28
RPF1Q9H9Y2 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.79□□□□□ -2.28
RPF1Q9H9Y2 AP000942.4-201ENST00000604811 241 ntBASIC0.79□□□□□ -2.28
RPF1Q9H9Y2 U6.104-201ENST00000637979 90 ntBASIC0.79□□□□□ -2.28
RPF1Q9H9Y2 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
RPF1Q9H9Y2 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.79□□□□□ -2.28
RPF1Q9H9Y2 MIR568-201ENST00000385036 95 ntBASIC0.78□□□□□ -2.28
RPF1Q9H9Y2 MIR616-201ENST00000385293 97 ntBASIC0.78□□□□□ -2.28
RPF1Q9H9Y2 RNU6-913P-201ENST00000390913 95 ntBASIC0.78□□□□□ -2.28
RPF1Q9H9Y2 SNORD89-201ENST00000390981 114 ntBASIC0.78□□□□□ -2.28
RPF1Q9H9Y2 RNU6-381P-201ENST00000391259 108 ntBASIC0.78□□□□□ -2.28
RPF1Q9H9Y2 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.78□□□□□ -2.28
RPF1Q9H9Y2 SNORD127-201ENST00000458892 86 ntBASIC0.78□□□□□ -2.28
RPF1Q9H9Y2 RNU7-67P-201ENST00000459003 62 ntBASIC0.78□□□□□ -2.28
RPF1Q9H9Y2 RNU6-561P-201ENST00000516222 102 ntBASIC0.78□□□□□ -2.28
RPF1Q9H9Y2 RNU6-1299P-201ENST00000516316 100 ntBASIC0.78□□□□□ -2.28
RPF1Q9H9Y2 RNU6-958P-201ENST00000516995 106 ntBASIC0.78□□□□□ -2.28
RPF1Q9H9Y2 AC023934.1-201ENST00000574529 2389 ntBASIC0.77□□□□□ -2.29
RPF1Q9H9Y2 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
RPF1Q9H9Y2 Y_RNA.54-201ENST00000362766 105 ntBASIC0.77□□□□□ -2.29
RPF1Q9H9Y2 Y_RNA.149-201ENST00000363558 117 ntBASIC0.77□□□□□ -2.29
RPF1Q9H9Y2 Y_RNA.168-201ENST00000363740 102 ntBASIC0.77□□□□□ -2.29
RPF1Q9H9Y2 Y_RNA.352-201ENST00000365439 102 ntBASIC0.77□□□□□ -2.29
RPF1Q9H9Y2 RNU6-205P-201ENST00000390858 107 ntBASIC0.77□□□□□ -2.29
RPF1Q9H9Y2 RNU6-1228P-201ENST00000391014 107 ntBASIC0.77□□□□□ -2.29
RPF1Q9H9Y2 SNORA40.5-201ENST00000391061 128 ntBASIC0.77□□□□□ -2.29
RPF1Q9H9Y2 RNU2-55P-201ENST00000411146 174 ntBASIC0.77□□□□□ -2.29
RPF1Q9H9Y2 AC006461.1-201ENST00000412637 326 ntBASIC0.77□□□□□ -2.29
RPF1Q9H9Y2 MTND2P23-201ENST00000422990 651 ntBASIC0.77□□□□□ -2.29
RPF1Q9H9Y2 snoU13.16-201ENST00000459350 104 ntBASIC0.77□□□□□ -2.29
RPF1Q9H9Y2 snoU13.21-201ENST00000459368 105 ntBASIC0.77□□□□□ -2.29
RPF1Q9H9Y2 AC107297.1-201ENST00000459991 176 ntBASIC0.77□□□□□ -2.29
RPF1Q9H9Y2 SCARNA15.1-201ENST00000516384 125 ntBASIC0.77□□□□□ -2.29
RPF1Q9H9Y2 RNU6-504P-201ENST00000516568 104 ntBASIC0.77□□□□□ -2.29
RPF1Q9H9Y2 MIR4714-201ENST00000580728 77 ntBASIC0.77□□□□□ -2.29
RPF1Q9H9Y2 AC134878.1-201ENST00000619901 243 ntBASIC0.77□□□□□ -2.29
RPF1Q9H9Y2 Y_RNA.133-201ENST00000363428 110 ntBASIC0.76□□□□□ -2.29
RPF1Q9H9Y2 RNU1-133P-201ENST00000364867 167 ntBASIC0.76□□□□□ -2.29
RPF1Q9H9Y2 Y_RNA.432-201ENST00000384087 111 ntBASIC0.76□□□□□ -2.29
RPF1Q9H9Y2 RNY3P5-201ENST00000384127 102 ntBASIC0.76□□□□□ -2.29
RPF1Q9H9Y2 Y_RNA.466-201ENST00000384294 113 ntBASIC0.76□□□□□ -2.29
RPF1Q9H9Y2 SNORA27-201ENST00000384323 126 ntBASIC0.76□□□□□ -2.29
RPF1Q9H9Y2 MIR508-201ENST00000384857 115 ntBASIC0.76□□□□□ -2.29
RPF1Q9H9Y2 RNU2-70P-201ENST00000410718 179 ntBASIC0.76□□□□□ -2.29
RPF1Q9H9Y2 AC244023.1-201ENST00000426884 112 ntBASIC0.76□□□□□ -2.29
RPF1Q9H9Y2 RNU6-327P-201ENST00000516270 127 ntBASIC0.76□□□□□ -2.29
RPF1Q9H9Y2 RNU6-126P-201ENST00000516685 103 ntBASIC0.76□□□□□ -2.29
RPF1Q9H9Y2 AC097639.2-201ENST00000603159 172 ntBASIC0.76□□□□□ -2.29
RPF1Q9H9Y2 AC242498.1-201ENST00000604134 111 ntBASIC0.76□□□□□ -2.29
RPF1Q9H9Y2 AL590095.2-201ENST00000604136 117 ntBASIC0.76□□□□□ -2.29
RPF1Q9H9Y2 7SK.10-201ENST00000621414 298 ntBASIC0.76□□□□□ -2.29
RPF1Q9H9Y2 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.76□□□□□ -2.29
RPF1Q9H9Y2 HSBP1P2-201ENST00000299671 229 ntBASIC0.75□□□□□ -2.29
RPF1Q9H9Y2 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
RPF1Q9H9Y2 Y_RNA.23-201ENST00000362496 106 ntBASIC0.75□□□□□ -2.29
RPF1Q9H9Y2 RNU6-369P-201ENST00000362515 102 ntBASIC0.75□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 264.3 ms