Protein–RNA interactions for Protein: Q9H9J4

USP42, Ubiquitin carboxyl-terminal hydrolase 42, humanhuman

Known RBP Predictions only

Length 1,324 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP42Q9H9J4 Y_RNA.13-201ENST00000362403 112 ntBASIC-0.18□□□□□ -2.44
USP42Q9H9J4 RNU6-1138P-201ENST00000365359 106 ntBASIC-0.18□□□□□ -2.44
USP42Q9H9J4 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.18□□□□□ -2.44
USP42Q9H9J4 Y_RNA.383-201ENST00000383855 97 ntBASIC-0.18□□□□□ -2.44
USP42Q9H9J4 RNU6-756P-201ENST00000383997 107 ntBASIC-0.18□□□□□ -2.44
USP42Q9H9J4 RNU6-937P-201ENST00000384325 106 ntBASIC-0.18□□□□□ -2.44
USP42Q9H9J4 Y_RNA.486-201ENST00000384398 107 ntBASIC-0.18□□□□□ -2.44
USP42Q9H9J4 AL138752.1-201ENST00000452964 351 ntBASIC-0.18□□□□□ -2.44
USP42Q9H9J4 RNU7-53P-201ENST00000516705 60 ntBASIC-0.18□□□□□ -2.44
USP42Q9H9J4 RNU6-699P-201ENST00000517081 110 ntBASIC-0.18□□□□□ -2.44
USP42Q9H9J4 RNA5SP47-201ENST00000517230 109 ntBASIC-0.18□□□□□ -2.44
USP42Q9H9J4 MIR5690-201ENST00000583739 73 ntBASIC-0.18□□□□□ -2.44
USP42Q9H9J4 VN1R91P-201ENST00000594377 169 ntBASIC-0.18□□□□□ -2.44
USP42Q9H9J4 AL049861.1-201ENST00000603130 150 ntBASIC-0.18□□□□□ -2.44
USP42Q9H9J4 AC080013.6-201ENST00000606185 215 ntBASIC-0.18□□□□□ -2.44
USP42Q9H9J4 RNU1-29P-201ENST00000606574 126 ntBASIC-0.18□□□□□ -2.44
USP42Q9H9J4 MIR1295B-201ENST00000636144 60 ntBASIC-0.18□□□□□ -2.44
USP42Q9H9J4 AC099654.14-201ENST00000638599 341 ntBASIC-0.18□□□□□ -2.44
USP42Q9H9J4 RNU6-845P-201ENST00000362578 103 ntBASIC-0.19□□□□□ -2.44
USP42Q9H9J4 RNU6-1215P-201ENST00000384441 102 ntBASIC-0.19□□□□□ -2.44
USP42Q9H9J4 MIR760-201ENST00000390220 80 ntBASIC-0.19□□□□□ -2.44
USP42Q9H9J4 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC-0.19□□□□□ -2.44
USP42Q9H9J4 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-0.19□□□□□ -2.44
USP42Q9H9J4 MIR4493-201ENST00000584016 73 ntBASIC-0.19□□□□□ -2.44
USP42Q9H9J4 AP001180.6-201ENST00000584918 159 ntBASIC-0.19□□□□□ -2.44
USP42Q9H9J4 WT1-AS_8.1-201ENST00000615200 275 ntBASIC-0.19□□□□□ -2.44
USP42Q9H9J4 MIR4272-201ENST00000635924 64 ntBASIC-0.19□□□□□ -2.44
USP42Q9H9J4 MIR499B-201ENST00000636498 73 ntBASIC-0.19□□□□□ -2.44
USP42Q9H9J4 RNA5SP128-201ENST00000365305 116 ntBASIC-0.2□□□□□ -2.44
USP42Q9H9J4 RNU6-597P-201ENST00000365620 102 ntBASIC-0.2□□□□□ -2.44
USP42Q9H9J4 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.2□□□□□ -2.44
USP42Q9H9J4 RNU6-514P-201ENST00000384208 107 ntBASIC-0.2□□□□□ -2.44
USP42Q9H9J4 SNORD63-201ENST00000384262 68 ntBASIC-0.2□□□□□ -2.44
USP42Q9H9J4 Y_RNA.474-201ENST00000384341 102 ntBASIC-0.2□□□□□ -2.44
USP42Q9H9J4 RNU6-929P-201ENST00000384429 107 ntBASIC-0.2□□□□□ -2.44
USP42Q9H9J4 RNU6-763P-201ENST00000390865 106 ntBASIC-0.2□□□□□ -2.44
USP42Q9H9J4 Y_RNA.588-201ENST00000391254 102 ntBASIC-0.2□□□□□ -2.44
USP42Q9H9J4 SNORA26.6-201ENST00000391256 115 ntBASIC-0.2□□□□□ -2.44
USP42Q9H9J4 MIR548I3-201ENST00000408378 149 ntBASIC-0.2□□□□□ -2.44
USP42Q9H9J4 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-0.2□□□□□ -2.44
USP42Q9H9J4 AC096949.1-201ENST00000412047 152 ntBASIC-0.2□□□□□ -2.44
USP42Q9H9J4 RNU6-693P-201ENST00000516134 107 ntBASIC-0.2□□□□□ -2.44
USP42Q9H9J4 RNU6-191P-201ENST00000516295 94 ntBASIC-0.2□□□□□ -2.44
USP42Q9H9J4 RNU6-504P-201ENST00000516568 104 ntBASIC-0.2□□□□□ -2.44
USP42Q9H9J4 RNU2-31P-201ENST00000516954 155 ntBASIC-0.2□□□□□ -2.44
USP42Q9H9J4 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.2□□□□□ -2.44
USP42Q9H9J4 MIR4752-201ENST00000579672 72 ntBASIC-0.2□□□□□ -2.44
USP42Q9H9J4 MIR4645-201ENST00000583158 77 ntBASIC-0.2□□□□□ -2.44
USP42Q9H9J4 AC124312.5-201ENST00000604451 268 ntBASIC-0.2□□□□□ -2.44
USP42Q9H9J4 Y_RNA.772-201ENST00000606692 102 ntBASIC-0.2□□□□□ -2.44
USP42Q9H9J4 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC-0.2□□□□□ -2.44
USP42Q9H9J4 RNU6-490P-201ENST00000362985 107 ntBASIC-0.21□□□□□ -2.44
USP42Q9H9J4 Y_RNA.166-201ENST00000363730 102 ntBASIC-0.21□□□□□ -2.44
USP42Q9H9J4 RNU6-899P-201ENST00000363947 107 ntBASIC-0.21□□□□□ -2.44
USP42Q9H9J4 SNORD114-15-201ENST00000364687 72 ntBASIC-0.21□□□□□ -2.44
USP42Q9H9J4 Y_RNA.279-201ENST00000364763 95 ntBASIC-0.21□□□□□ -2.44
USP42Q9H9J4 SNORD61-201ENST00000384252 73 ntBASIC-0.21□□□□□ -2.44
USP42Q9H9J4 SNORD28-201ENST00000384706 75 ntBASIC-0.21□□□□□ -2.44
USP42Q9H9J4 U8.15-201ENST00000390947 134 ntBASIC-0.21□□□□□ -2.44
USP42Q9H9J4 MTND1P14-201ENST00000427400 950 ntBASIC-0.21□□□□□ -2.44
USP42Q9H9J4 AL160004.2-201ENST00000432935 350 ntBASIC-0.21□□□□□ -2.44
USP42Q9H9J4 AC099799.1-201ENST00000439809 192 ntBASIC-0.21□□□□□ -2.44
USP42Q9H9J4 RNU2-11P-201ENST00000459191 187 ntBASIC-0.21□□□□□ -2.44
USP42Q9H9J4 SNORD77.4-201ENST00000516158 81 ntBASIC-0.21□□□□□ -2.44
USP42Q9H9J4 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.21□□□□□ -2.44
USP42Q9H9J4 MIR6082-201ENST00000613604 109 ntBASIC-0.21□□□□□ -2.44
USP42Q9H9J4 DLEU2_2.2-201ENST00000615474 90 ntBASIC-0.21□□□□□ -2.44
USP42Q9H9J4 Y_RNA.143-201ENST00000363520 106 ntBASIC-0.22□□□□□ -2.44
USP42Q9H9J4 SNORD81.2-201ENST00000365153 76 ntBASIC-0.22□□□□□ -2.44
USP42Q9H9J4 Y_RNA.418-201ENST00000384029 102 ntBASIC-0.22□□□□□ -2.44
USP42Q9H9J4 SNORD77.3-201ENST00000391113 65 ntBASIC-0.22□□□□□ -2.44
USP42Q9H9J4 Y_RNA.653-201ENST00000459091 95 ntBASIC-0.22□□□□□ -2.44
USP42Q9H9J4 RNU7-45P-201ENST00000459460 63 ntBASIC-0.22□□□□□ -2.44
USP42Q9H9J4 RPL39P34-201ENST00000477141 156 ntBASIC-0.22□□□□□ -2.44
USP42Q9H9J4 RNU6-998P-201ENST00000515894 101 ntBASIC-0.22□□□□□ -2.44
USP42Q9H9J4 RNU6-848P-201ENST00000515948 107 ntBASIC-0.22□□□□□ -2.44
USP42Q9H9J4 RNU6-617P-201ENST00000516147 107 ntBASIC-0.22□□□□□ -2.44
USP42Q9H9J4 RNU6-473P-201ENST00000516164 107 ntBASIC-0.22□□□□□ -2.44
USP42Q9H9J4 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.22□□□□□ -2.44
USP42Q9H9J4 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-0.22□□□□□ -2.44
USP42Q9H9J4 MIR4743-201ENST00000584576 69 ntBASIC-0.22□□□□□ -2.44
USP42Q9H9J4 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-0.22□□□□□ -2.44
USP42Q9H9J4 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.22□□□□□ -2.44
USP42Q9H9J4 AC091304.10-201ENST00000641554 121 ntBASIC-0.22□□□□□ -2.44
USP42Q9H9J4 RNU6-623P-201ENST00000363143 105 ntBASIC-0.23□□□□□ -2.45
USP42Q9H9J4 RNU6-1205P-201ENST00000363625 106 ntBASIC-0.23□□□□□ -2.45
USP42Q9H9J4 Y_RNA.318-201ENST00000365131 97 ntBASIC-0.23□□□□□ -2.45
USP42Q9H9J4 RNU6-144P-201ENST00000383951 107 ntBASIC-0.23□□□□□ -2.45
USP42Q9H9J4 Y_RNA.496-201ENST00000384444 101 ntBASIC-0.23□□□□□ -2.45
USP42Q9H9J4 RNU6-21P-201ENST00000384710 107 ntBASIC-0.23□□□□□ -2.45
USP42Q9H9J4 RNU6-291P-201ENST00000384720 107 ntBASIC-0.23□□□□□ -2.45
USP42Q9H9J4 MIR892B-201ENST00000401279 77 ntBASIC-0.23□□□□□ -2.45
USP42Q9H9J4 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC-0.23□□□□□ -2.45
USP42Q9H9J4 AF228730.3-201ENST00000436691 102 ntBASIC-0.23□□□□□ -2.45
USP42Q9H9J4 POLR2KP2-201ENST00000438155 177 ntBASIC-0.23□□□□□ -2.45
USP42Q9H9J4 AC023449.1-201ENST00000454464 154 ntBASIC-0.23□□□□□ -2.45
USP42Q9H9J4 snoU13.19-201ENST00000459148 104 ntBASIC-0.23□□□□□ -2.45
USP42Q9H9J4 Y_RNA.637-201ENST00000459424 114 ntBASIC-0.23□□□□□ -2.45
USP42Q9H9J4 RNU6-1270P-201ENST00000517128 108 ntBASIC-0.23□□□□□ -2.45
USP42Q9H9J4 MIR4491-201ENST00000581087 68 ntBASIC-0.23□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms