Protein–RNA interactions for Protein: Q9H6Z4

RANBP3, Ran-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3Q9H6Z4 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.33□□□□□ -2.36
RANBP3Q9H6Z4 SNORA24-201ENST00000384096 131 ntBASIC0.33□□□□□ -2.36
RANBP3Q9H6Z4 RNU6-474P-201ENST00000384243 107 ntBASIC0.33□□□□□ -2.36
RANBP3Q9H6Z4 Y_RNA.527-201ENST00000384573 102 ntBASIC0.33□□□□□ -2.36
RANBP3Q9H6Z4 MIR588-201ENST00000384900 83 ntBASIC0.33□□□□□ -2.36
RANBP3Q9H6Z4 RNU6-938P-201ENST00000411285 103 ntBASIC0.33□□□□□ -2.36
RANBP3Q9H6Z4 MTND5P22-201ENST00000458380 195 ntBASIC0.33□□□□□ -2.36
RANBP3Q9H6Z4 MIR1273G-201ENST00000577677 100 ntBASIC0.33□□□□□ -2.36
RANBP3Q9H6Z4 AC006006.1-201ENST00000603082 144 ntBASIC0.33□□□□□ -2.36
RANBP3Q9H6Z4 AC008608.1-201ENST00000603910 127 ntBASIC0.33□□□□□ -2.36
RANBP3Q9H6Z4 AL355297.3-201ENST00000604082 446 ntBASIC0.33□□□□□ -2.36
RANBP3Q9H6Z4 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.32□□□□□ -2.36
RANBP3Q9H6Z4 Y_RNA.19-201ENST00000362462 99 ntBASIC0.32□□□□□ -2.36
RANBP3Q9H6Z4 Y_RNA.210-201ENST00000364161 110 ntBASIC0.32□□□□□ -2.36
RANBP3Q9H6Z4 SNORD61-201ENST00000384252 73 ntBASIC0.32□□□□□ -2.36
RANBP3Q9H6Z4 SNORA27-201ENST00000384323 126 ntBASIC0.32□□□□□ -2.36
RANBP3Q9H6Z4 SNORD38B-201ENST00000384690 67 ntBASIC0.32□□□□□ -2.36
RANBP3Q9H6Z4 MIR548A2-201ENST00000384956 97 ntBASIC0.32□□□□□ -2.36
RANBP3Q9H6Z4 SNORA53-201ENST00000391141 249 ntBASIC0.32□□□□□ -2.36
RANBP3Q9H6Z4 RNA5SP496-201ENST00000391240 109 ntBASIC0.32□□□□□ -2.36
RANBP3Q9H6Z4 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.32□□□□□ -2.36
RANBP3Q9H6Z4 AC131281.1-201ENST00000522984 164 ntBASIC0.32□□□□□ -2.36
RANBP3Q9H6Z4 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.32□□□□□ -2.36
RANBP3Q9H6Z4 AC037487.3-201ENST00000606668 112 ntBASIC0.32□□□□□ -2.36
RANBP3Q9H6Z4 SNORD38B-202ENST00000625943 69 ntBASIC0.32□□□□□ -2.36
RANBP3Q9H6Z4 snoU18.1-201ENST00000629629 71 ntBASIC0.32□□□□□ -2.36
RANBP3Q9H6Z4 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.32□□□□□ -2.36
RANBP3Q9H6Z4 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
RANBP3Q9H6Z4 Y_RNA.24-201ENST00000362508 103 ntBASIC0.31□□□□□ -2.36
RANBP3Q9H6Z4 Y_RNA.28-201ENST00000362554 111 ntBASIC0.31□□□□□ -2.36
RANBP3Q9H6Z4 Y_RNA.64-201ENST00000362845 102 ntBASIC0.31□□□□□ -2.36
RANBP3Q9H6Z4 Y_RNA.380-201ENST00000365663 111 ntBASIC0.31□□□□□ -2.36
RANBP3Q9H6Z4 RNU6-364P-201ENST00000384387 107 ntBASIC0.31□□□□□ -2.36
RANBP3Q9H6Z4 RNU6-1165P-201ENST00000410119 107 ntBASIC0.31□□□□□ -2.36
RANBP3Q9H6Z4 AC022028.1-201ENST00000412054 408 ntBASIC0.31□□□□□ -2.36
RANBP3Q9H6Z4 RNU7-56P-201ENST00000458744 62 ntBASIC0.31□□□□□ -2.36
RANBP3Q9H6Z4 RPS29P24-201ENST00000486345 171 ntBASIC0.31□□□□□ -2.36
RANBP3Q9H6Z4 MTCO2P24-201ENST00000515611 426 ntBASIC0.31□□□□□ -2.36
RANBP3Q9H6Z4 SCARNA24.2-201ENST00000516968 130 ntBASIC0.31□□□□□ -2.36
RANBP3Q9H6Z4 AC100767.1-201ENST00000528178 123 ntBASIC0.31□□□□□ -2.36
RANBP3Q9H6Z4 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.31□□□□□ -2.36
RANBP3Q9H6Z4 MIRLET7D-201ENST00000362263 87 ntBASIC0.3□□□□□ -2.36
RANBP3Q9H6Z4 Y_RNA.216-201ENST00000364205 93 ntBASIC0.3□□□□□ -2.36
RANBP3Q9H6Z4 SNORA1.1-201ENST00000364671 133 ntBASIC0.3□□□□□ -2.36
RANBP3Q9H6Z4 Y_RNA.431-201ENST00000384086 102 ntBASIC0.3□□□□□ -2.36
RANBP3Q9H6Z4 SNORD12C-201ENST00000386307 89 ntBASIC0.3□□□□□ -2.36
RANBP3Q9H6Z4 MIR938-201ENST00000401216 83 ntBASIC0.3□□□□□ -2.36
RANBP3Q9H6Z4 MIR1257-201ENST00000408490 117 ntBASIC0.3□□□□□ -2.36
RANBP3Q9H6Z4 RNU7-102P-201ENST00000458948 62 ntBASIC0.3□□□□□ -2.36
RANBP3Q9H6Z4 RN7SKP12-201ENST00000516275 143 ntBASIC0.3□□□□□ -2.36
RANBP3Q9H6Z4 RNA5SP134-201ENST00000516492 96 ntBASIC0.3□□□□□ -2.36
RANBP3Q9H6Z4 RNU7-53P-201ENST00000516705 60 ntBASIC0.3□□□□□ -2.36
RANBP3Q9H6Z4 Y_RNA.802-201ENST00000614892 130 ntBASIC0.3□□□□□ -2.36
RANBP3Q9H6Z4 AC092634.7-201ENST00000621022 103 ntBASIC0.3□□□□□ -2.36
RANBP3Q9H6Z4 MIR924-201ENST00000638017 53 ntBASIC0.3□□□□□ -2.36
RANBP3Q9H6Z4 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.29□□□□□ -2.36
RANBP3Q9H6Z4 Y_RNA.91-201ENST00000363042 107 ntBASIC0.29□□□□□ -2.36
RANBP3Q9H6Z4 RNU6-770P-201ENST00000363929 105 ntBASIC0.29□□□□□ -2.36
RANBP3Q9H6Z4 Y_RNA.205-201ENST00000364128 113 ntBASIC0.29□□□□□ -2.36
RANBP3Q9H6Z4 Y_RNA.214-201ENST00000364201 112 ntBASIC0.29□□□□□ -2.36
RANBP3Q9H6Z4 SNORA22B-201ENST00000383876 138 ntBASIC0.29□□□□□ -2.36
RANBP3Q9H6Z4 Y_RNA.509-201ENST00000384506 99 ntBASIC0.29□□□□□ -2.36
RANBP3Q9H6Z4 SNORA40.5-201ENST00000391061 128 ntBASIC0.29□□□□□ -2.36
RANBP3Q9H6Z4 RNU6-602P-201ENST00000411155 105 ntBASIC0.29□□□□□ -2.36
RANBP3Q9H6Z4 AC087499.4-201ENST00000448505 178 ntBASIC0.29□□□□□ -2.36
RANBP3Q9H6Z4 RNU7-73P-201ENST00000458743 63 ntBASIC0.29□□□□□ -2.36
RANBP3Q9H6Z4 RNU2-11P-201ENST00000459191 187 ntBASIC0.29□□□□□ -2.36
RANBP3Q9H6Z4 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.29□□□□□ -2.36
RANBP3Q9H6Z4 MIR103A1-201ENST00000362165 78 ntBASIC0.28□□□□□ -2.36
RANBP3Q9H6Z4 MIR330-201ENST00000362196 94 ntBASIC0.28□□□□□ -2.36
RANBP3Q9H6Z4 Y_RNA.138-201ENST00000363462 102 ntBASIC0.28□□□□□ -2.36
RANBP3Q9H6Z4 Y_RNA.217-201ENST00000364214 105 ntBASIC0.28□□□□□ -2.36
RANBP3Q9H6Z4 Y_RNA.229-201ENST00000364347 113 ntBASIC0.28□□□□□ -2.36
RANBP3Q9H6Z4 MIR548I3-201ENST00000408378 149 ntBASIC0.28□□□□□ -2.36
RANBP3Q9H6Z4 Y_RNA.622-201ENST00000411091 108 ntBASIC0.28□□□□□ -2.36
RANBP3Q9H6Z4 RNU7-185P-201ENST00000459215 60 ntBASIC0.28□□□□□ -2.36
RANBP3Q9H6Z4 Y_RNA.641-201ENST00000459414 105 ntBASIC0.28□□□□□ -2.36
RANBP3Q9H6Z4 RNU7-45P-201ENST00000459460 63 ntBASIC0.28□□□□□ -2.36
RANBP3Q9H6Z4 Y_RNA.631-201ENST00000459607 101 ntBASIC0.28□□□□□ -2.36
RANBP3Q9H6Z4 AC002350.1-201ENST00000490759 375 ntBASIC0.28□□□□□ -2.36
RANBP3Q9H6Z4 RNU6-365P-201ENST00000517113 106 ntBASIC0.28□□□□□ -2.36
RANBP3Q9H6Z4 Y_RNA.721-201ENST00000517207 102 ntBASIC0.28□□□□□ -2.36
RANBP3Q9H6Z4 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC0.28□□□□□ -2.36
RANBP3Q9H6Z4 RNU6-988P-201ENST00000519081 107 ntBASIC0.28□□□□□ -2.36
RANBP3Q9H6Z4 MIR4662B-201ENST00000579498 81 ntBASIC0.28□□□□□ -2.36
RANBP3Q9H6Z4 AL160413.1-201ENST00000622780 310 ntBASIC0.28□□□□□ -2.36
RANBP3Q9H6Z4 Z97988.1-201ENST00000637697 135 ntBASIC0.28□□□□□ -2.36
RANBP3Q9H6Z4 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.28□□□□□ -2.36
RANBP3Q9H6Z4 Y_RNA.117-201ENST00000363294 101 ntBASIC0.27□□□□□ -2.37
RANBP3Q9H6Z4 SNORA63C-201ENST00000364578 129 ntBASIC0.27□□□□□ -2.37
RANBP3Q9H6Z4 RNA5SP517-201ENST00000364724 117 ntBASIC0.27□□□□□ -2.37
RANBP3Q9H6Z4 RNU6-326P-201ENST00000365480 107 ntBASIC0.27□□□□□ -2.37
RANBP3Q9H6Z4 Y_RNA.455-201ENST00000384230 98 ntBASIC0.27□□□□□ -2.37
RANBP3Q9H6Z4 MIR125B2-201ENST00000385128 89 ntBASIC0.27□□□□□ -2.37
RANBP3Q9H6Z4 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.27□□□□□ -2.37
RANBP3Q9H6Z4 AF228730.3-201ENST00000436691 102 ntBASIC0.27□□□□□ -2.37
RANBP3Q9H6Z4 SNORA25.12-201ENST00000516202 82 ntBASIC0.27□□□□□ -2.37
RANBP3Q9H6Z4 SNORA27.4-201ENST00000516650 95 ntBASIC0.27□□□□□ -2.37
RANBP3Q9H6Z4 RNU7-156P-201ENST00000517214 74 ntBASIC0.27□□□□□ -2.37
RANBP3Q9H6Z4 AP003733.2-201ENST00000529409 171 ntBASIC0.27□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 399.9 ms