Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 SNORA18.4-201ENST00000516440 124 ntBASIC0.73□□□□□ -2.29
RNF41Q9H4P4 SNORD115-40-201ENST00000606510 82 ntBASIC0.73□□□□□ -2.29
RNF41Q9H4P4 RNU6-94P-201ENST00000607728 107 ntBASIC0.73□□□□□ -2.29
RNF41Q9H4P4 AL365265.1-201ENST00000621045 234 ntBASIC0.73□□□□□ -2.29
RNF41Q9H4P4 Y_RNA.47-201ENST00000362697 108 ntBASIC0.72□□□□□ -2.29
RNF41Q9H4P4 Y_RNA.91-201ENST00000363042 107 ntBASIC0.72□□□□□ -2.29
RNF41Q9H4P4 RNU6-653P-201ENST00000363074 106 ntBASIC0.72□□□□□ -2.29
RNF41Q9H4P4 Y_RNA.176-201ENST00000363815 109 ntBASIC0.72□□□□□ -2.29
RNF41Q9H4P4 RNU6-396P-201ENST00000365369 105 ntBASIC0.72□□□□□ -2.29
RNF41Q9H4P4 RNY3P5-201ENST00000384127 102 ntBASIC0.72□□□□□ -2.29
RNF41Q9H4P4 RNU6-125P-201ENST00000384505 107 ntBASIC0.72□□□□□ -2.29
RNF41Q9H4P4 MIR608-201ENST00000384820 100 ntBASIC0.72□□□□□ -2.29
RNF41Q9H4P4 MIR100-201ENST00000385259 80 ntBASIC0.72□□□□□ -2.29
RNF41Q9H4P4 SNORA40.5-201ENST00000391061 128 ntBASIC0.72□□□□□ -2.29
RNF41Q9H4P4 AC006461.1-201ENST00000412637 326 ntBASIC0.72□□□□□ -2.29
RNF41Q9H4P4 AC244023.1-201ENST00000426884 112 ntBASIC0.72□□□□□ -2.29
RNF41Q9H4P4 FABP5P4-201ENST00000437203 171 ntBASIC0.72□□□□□ -2.29
RNF41Q9H4P4 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.72□□□□□ -2.29
RNF41Q9H4P4 MIR2115-201ENST00000516657 100 ntBASIC0.72□□□□□ -2.29
RNF41Q9H4P4 RNU6-365P-201ENST00000517113 106 ntBASIC0.72□□□□□ -2.29
RNF41Q9H4P4 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.72□□□□□ -2.29
RNF41Q9H4P4 SNORA4-201ENST00000584302 138 ntBASIC0.72□□□□□ -2.29
RNF41Q9H4P4 AC242498.1-201ENST00000604134 111 ntBASIC0.72□□□□□ -2.29
RNF41Q9H4P4 MIR8055-201ENST00000610739 97 ntBASIC0.72□□□□□ -2.29
RNF41Q9H4P4 RNU6-369P-201ENST00000362515 102 ntBASIC0.71□□□□□ -2.3
RNF41Q9H4P4 Y_RNA.76-201ENST00000362931 109 ntBASIC0.71□□□□□ -2.3
RNF41Q9H4P4 Y_RNA.133-201ENST00000363428 110 ntBASIC0.71□□□□□ -2.3
RNF41Q9H4P4 Y_RNA.168-201ENST00000363740 102 ntBASIC0.71□□□□□ -2.3
RNF41Q9H4P4 Y_RNA.634-201ENST00000364811 113 ntBASIC0.71□□□□□ -2.3
RNF41Q9H4P4 MIR568-201ENST00000385036 95 ntBASIC0.71□□□□□ -2.3
RNF41Q9H4P4 MIR616-201ENST00000385293 97 ntBASIC0.71□□□□□ -2.3
RNF41Q9H4P4 RPS3AP1-201ENST00000413190 320 ntBASIC0.71□□□□□ -2.3
RNF41Q9H4P4 AF228730.3-201ENST00000436691 102 ntBASIC0.71□□□□□ -2.3
RNF41Q9H4P4 U7.7-201ENST00000459276 60 ntBASIC0.71□□□□□ -2.3
RNF41Q9H4P4 snoU13.16-201ENST00000459350 104 ntBASIC0.71□□□□□ -2.3
RNF41Q9H4P4 SNORD36C-201ENST00000516733 66 ntBASIC0.71□□□□□ -2.3
RNF41Q9H4P4 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.71□□□□□ -2.3
RNF41Q9H4P4 AC097639.2-201ENST00000603159 172 ntBASIC0.71□□□□□ -2.3
RNF41Q9H4P4 AP000942.4-201ENST00000604811 241 ntBASIC0.71□□□□□ -2.3
RNF41Q9H4P4 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.7□□□□□ -2.3
RNF41Q9H4P4 Y_RNA.241-201ENST00000364470 117 ntBASIC0.7□□□□□ -2.3
RNF41Q9H4P4 Y_RNA.352-201ENST00000365439 102 ntBASIC0.7□□□□□ -2.3
RNF41Q9H4P4 Y_RNA.416-201ENST00000384014 113 ntBASIC0.7□□□□□ -2.3
RNF41Q9H4P4 MIR605-201ENST00000385078 83 ntBASIC0.7□□□□□ -2.3
RNF41Q9H4P4 MT-TN-201ENST00000387400 73 ntBASIC0.7□□□□□ -2.3
RNF41Q9H4P4 RNU6-913P-201ENST00000390913 95 ntBASIC0.7□□□□□ -2.3
RNF41Q9H4P4 RNU6-381P-201ENST00000391259 108 ntBASIC0.7□□□□□ -2.3
RNF41Q9H4P4 Y_RNA.590-201ENST00000410140 107 ntBASIC0.7□□□□□ -2.3
RNF41Q9H4P4 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.7□□□□□ -2.3
RNF41Q9H4P4 SNORD127-201ENST00000458892 86 ntBASIC0.7□□□□□ -2.3
RNF41Q9H4P4 RNU6-561P-201ENST00000516222 102 ntBASIC0.7□□□□□ -2.3
RNF41Q9H4P4 RNU6-1299P-201ENST00000516316 100 ntBASIC0.7□□□□□ -2.3
RNF41Q9H4P4 RNA5SP153-201ENST00000516498 76 ntBASIC0.7□□□□□ -2.3
RNF41Q9H4P4 RNU6-504P-201ENST00000516568 104 ntBASIC0.7□□□□□ -2.3
RNF41Q9H4P4 RNU6-126P-201ENST00000516685 103 ntBASIC0.7□□□□□ -2.3
RNF41Q9H4P4 AP003484.1-201ENST00000530974 250 ntBASIC0.7□□□□□ -2.3
RNF41Q9H4P4 MIR377-201ENST00000362145 69 ntBASIC0.69□□□□□ -2.3
RNF41Q9H4P4 RNU6-42P-201ENST00000384165 107 ntBASIC0.69□□□□□ -2.3
RNF41Q9H4P4 Y_RNA.459-201ENST00000384251 102 ntBASIC0.69□□□□□ -2.3
RNF41Q9H4P4 Y_RNA.562-201ENST00000384695 113 ntBASIC0.69□□□□□ -2.3
RNF41Q9H4P4 RNU6-1228P-201ENST00000391014 107 ntBASIC0.69□□□□□ -2.3
RNF41Q9H4P4 AL606845.1-201ENST00000404881 255 ntBASIC0.69□□□□□ -2.3
RNF41Q9H4P4 RNU2-64P-201ENST00000411315 191 ntBASIC0.69□□□□□ -2.3
RNF41Q9H4P4 AL606490.4-201ENST00000423117 127 ntBASIC0.69□□□□□ -2.3
RNF41Q9H4P4 RNU7-73P-201ENST00000458743 63 ntBASIC0.69□□□□□ -2.3
RNF41Q9H4P4 AC107297.1-201ENST00000459991 176 ntBASIC0.69□□□□□ -2.3
RNF41Q9H4P4 AC113410.1-201ENST00000505029 247 ntBASIC0.69□□□□□ -2.3
RNF41Q9H4P4 RNU6-1110P-201ENST00000516462 101 ntBASIC0.69□□□□□ -2.3
RNF41Q9H4P4 RNU6-1270P-201ENST00000517128 108 ntBASIC0.69□□□□□ -2.3
RNF41Q9H4P4 AL360085.1-201ENST00000604713 532 ntBASIC0.69□□□□□ -2.3
RNF41Q9H4P4 AL353765.1-201ENST00000605514 183 ntBASIC0.69□□□□□ -2.3
RNF41Q9H4P4 RMST_2.1-201ENST00000617263 136 ntBASIC0.69□□□□□ -2.3
RNF41Q9H4P4 AC134878.1-201ENST00000619901 243 ntBASIC0.69□□□□□ -2.3
RNF41Q9H4P4 U6.104-201ENST00000637979 90 ntBASIC0.69□□□□□ -2.3
RNF41Q9H4P4 Y_RNA.277-201ENST00000364754 102 ntBASIC0.68□□□□□ -2.3
RNF41Q9H4P4 SNORA27-201ENST00000384323 126 ntBASIC0.68□□□□□ -2.3
RNF41Q9H4P4 SNORA2B-201ENST00000384583 137 ntBASIC0.68□□□□□ -2.3
RNF41Q9H4P4 SNORD89-201ENST00000390981 114 ntBASIC0.68□□□□□ -2.3
RNF41Q9H4P4 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.68□□□□□ -2.3
RNF41Q9H4P4 Y_RNA.622-201ENST00000411091 108 ntBASIC0.68□□□□□ -2.3
RNF41Q9H4P4 RNU6-958P-201ENST00000516995 106 ntBASIC0.68□□□□□ -2.3
RNF41Q9H4P4 MIR6734-201ENST00000621166 68 ntBASIC0.68□□□□□ -2.3
RNF41Q9H4P4 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
RNF41Q9H4P4 Y_RNA.23-201ENST00000362496 106 ntBASIC0.67□□□□□ -2.3
RNF41Q9H4P4 RNU6-1309P-201ENST00000363305 108 ntBASIC0.67□□□□□ -2.3
RNF41Q9H4P4 Y_RNA.432-201ENST00000384087 111 ntBASIC0.67□□□□□ -2.3
RNF41Q9H4P4 MIR92A1-201ENST00000385233 78 ntBASIC0.67□□□□□ -2.3
RNF41Q9H4P4 SNORD58.1-201ENST00000391313 66 ntBASIC0.67□□□□□ -2.3
RNF41Q9H4P4 MIR1827-201ENST00000408549 66 ntBASIC0.67□□□□□ -2.3
RNF41Q9H4P4 RNU2-38P-201ENST00000410856 79 ntBASIC0.67□□□□□ -2.3
RNF41Q9H4P4 RNU7-67P-201ENST00000459003 62 ntBASIC0.67□□□□□ -2.3
RNF41Q9H4P4 snoU13.21-201ENST00000459368 105 ntBASIC0.67□□□□□ -2.3
RNF41Q9H4P4 MTND1P19-201ENST00000511780 315 ntBASIC0.67□□□□□ -2.3
RNF41Q9H4P4 SCARNA15.1-201ENST00000516384 125 ntBASIC0.67□□□□□ -2.3
RNF41Q9H4P4 AC004817.2-201ENST00000561794 651 ntBASIC0.67□□□□□ -2.3
RNF41Q9H4P4 MIR376A2-201ENST00000636782 80 ntBASIC0.67□□□□□ -2.3
RNF41Q9H4P4 Z97988.1-201ENST00000637697 135 ntBASIC0.67□□□□□ -2.3
RNF41Q9H4P4 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
RNF41Q9H4P4 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
RNF41Q9H4P4 Y_RNA.149-201ENST00000363558 117 ntBASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms