Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 MIR4263-201ENST00000584745 83 ntBASIC-0.79□□□□□ -2.54
UPF3BQ9BZI7 AL080274.1-201ENST00000605565 220 ntBASIC-0.79□□□□□ -2.54
UPF3BQ9BZI7 AL133255.1-201ENST00000606374 441 ntBASIC-0.79□□□□□ -2.54
UPF3BQ9BZI7 AC112487.2-201ENST00000637950 304 ntBASIC-0.79□□□□□ -2.54
UPF3BQ9BZI7 AL596211.1-201ENST00000569873 2277 ntBASIC-0.8□□□□□ -2.54
UPF3BQ9BZI7 SNORD115-28-201ENST00000363931 81 ntBASIC-0.8□□□□□ -2.54
UPF3BQ9BZI7 SNORD116-9-201ENST00000384000 95 ntBASIC-0.8□□□□□ -2.54
UPF3BQ9BZI7 SNORD116-3-201ENST00000384287 95 ntBASIC-0.8□□□□□ -2.54
UPF3BQ9BZI7 SNORD116-8-201ENST00000384365 95 ntBASIC-0.8□□□□□ -2.54
UPF3BQ9BZI7 SNORD116-7-201ENST00000384404 95 ntBASIC-0.8□□□□□ -2.54
UPF3BQ9BZI7 SNORD116-5-201ENST00000384462 95 ntBASIC-0.8□□□□□ -2.54
UPF3BQ9BZI7 MTND4P28-201ENST00000426217 387 ntBASIC-0.8□□□□□ -2.54
UPF3BQ9BZI7 AC098826.2-201ENST00000452011 651 ntBASIC-0.8□□□□□ -2.54
UPF3BQ9BZI7 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.8□□□□□ -2.54
UPF3BQ9BZI7 AP003072.1-201ENST00000531740 145 ntBASIC-0.8□□□□□ -2.54
UPF3BQ9BZI7 AC124864.2-201ENST00000624736 186 ntBASIC-0.8□□□□□ -2.54
UPF3BQ9BZI7 RNY3P3-201ENST00000363816 102 ntBASIC-0.81□□□□□ -2.54
UPF3BQ9BZI7 Y_RNA.230-201ENST00000364348 109 ntBASIC-0.81□□□□□ -2.54
UPF3BQ9BZI7 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.81□□□□□ -2.54
UPF3BQ9BZI7 SNORA22B-201ENST00000383876 138 ntBASIC-0.81□□□□□ -2.54
UPF3BQ9BZI7 RNU6-483P-201ENST00000384088 108 ntBASIC-0.81□□□□□ -2.54
UPF3BQ9BZI7 Y_RNA.473-201ENST00000384333 102 ntBASIC-0.81□□□□□ -2.54
UPF3BQ9BZI7 MIR548I3-201ENST00000408378 149 ntBASIC-0.81□□□□□ -2.54
UPF3BQ9BZI7 RPL7P42-201ENST00000481005 679 ntBASIC-0.81□□□□□ -2.54
UPF3BQ9BZI7 MTND5P26-201ENST00000426018 1752 ntBASIC-0.81□□□□□ -2.54
UPF3BQ9BZI7 Y_RNA.2-201ENST00000362330 96 ntBASIC-0.82□□□□□ -2.54
UPF3BQ9BZI7 Y_RNA.288-201ENST00000364854 92 ntBASIC-0.82□□□□□ -2.54
UPF3BQ9BZI7 RNU6-1013P-201ENST00000384180 107 ntBASIC-0.82□□□□□ -2.54
UPF3BQ9BZI7 MIR876-201ENST00000401147 81 ntBASIC-0.82□□□□□ -2.54
UPF3BQ9BZI7 SNORA36B-201ENST00000410438 131 ntBASIC-0.82□□□□□ -2.54
UPF3BQ9BZI7 MTATP6P19-201ENST00000413797 659 ntBASIC-0.82□□□□□ -2.54
UPF3BQ9BZI7 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC-0.82□□□□□ -2.54
UPF3BQ9BZI7 AC019235.1-201ENST00000503847 207 ntBASIC-0.82□□□□□ -2.54
UPF3BQ9BZI7 AC245008.1-201ENST00000608123 476 ntBASIC-0.82□□□□□ -2.54
UPF3BQ9BZI7 MIR1244-1-201ENST00000612829 85 ntBASIC-0.82□□□□□ -2.54
UPF3BQ9BZI7 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.82□□□□□ -2.54
UPF3BQ9BZI7 AC022140.2-201ENST00000623500 188 ntBASIC-0.82□□□□□ -2.54
UPF3BQ9BZI7 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.82□□□□□ -2.54
UPF3BQ9BZI7 MIR1244-3-201ENST00000635744 85 ntBASIC-0.82□□□□□ -2.54
UPF3BQ9BZI7 MIR1244-2-201ENST00000636449 85 ntBASIC-0.82□□□□□ -2.54
UPF3BQ9BZI7 MIR1244-4-202ENST00000636813 85 ntBASIC-0.82□□□□□ -2.54
UPF3BQ9BZI7 RNU6-780P-201ENST00000391030 104 ntBASIC-0.83□□□□□ -2.54
UPF3BQ9BZI7 SNORD77.3-201ENST00000391113 65 ntBASIC-0.83□□□□□ -2.54
UPF3BQ9BZI7 MIR1207-201ENST00000408249 87 ntBASIC-0.83□□□□□ -2.54
UPF3BQ9BZI7 RNA5SP237-201ENST00000410414 113 ntBASIC-0.83□□□□□ -2.54
UPF3BQ9BZI7 AC063944.3-201ENST00000609969 533 ntBASIC-0.83□□□□□ -2.54
UPF3BQ9BZI7 Y_RNA.37-201ENST00000362606 108 ntBASIC-0.84□□□□□ -2.54
UPF3BQ9BZI7 Y_RNA.359-201ENST00000365498 102 ntBASIC-0.84□□□□□ -2.54
UPF3BQ9BZI7 SNORA72.6-201ENST00000384520 129 ntBASIC-0.84□□□□□ -2.54
UPF3BQ9BZI7 Y_RNA.594-201ENST00000410373 140 ntBASIC-0.84□□□□□ -2.54
UPF3BQ9BZI7 MTND1P2-201ENST00000430604 821 ntBASIC-0.84□□□□□ -2.54
UPF3BQ9BZI7 Y_RNA.704-201ENST00000516851 102 ntBASIC-0.84□□□□□ -2.54
UPF3BQ9BZI7 AC092794.2-201ENST00000620933 563 ntBASIC-0.84□□□□□ -2.54
UPF3BQ9BZI7 AC090617.10-201ENST00000624308 134 ntBASIC-0.84□□□□□ -2.54
UPF3BQ9BZI7 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.84□□□□□ -2.54
UPF3BQ9BZI7 Y_RNA.52-201ENST00000362760 96 ntBASIC-0.85□□□□□ -2.55
UPF3BQ9BZI7 RNA5SP245-201ENST00000364239 121 ntBASIC-0.85□□□□□ -2.55
UPF3BQ9BZI7 RNU6-593P-201ENST00000364716 112 ntBASIC-0.85□□□□□ -2.55
UPF3BQ9BZI7 Y_RNA.413-201ENST00000384007 102 ntBASIC-0.85□□□□□ -2.55
UPF3BQ9BZI7 Y_RNA.553-201ENST00000384670 102 ntBASIC-0.85□□□□□ -2.55
UPF3BQ9BZI7 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.85□□□□□ -2.55
UPF3BQ9BZI7 SNORA26.6-201ENST00000391256 115 ntBASIC-0.85□□□□□ -2.55
UPF3BQ9BZI7 AC108059.2-201ENST00000434626 151 ntBASIC-0.85□□□□□ -2.55
UPF3BQ9BZI7 SPINT5P-201ENST00000448174 155 ntBASIC-0.85□□□□□ -2.55
UPF3BQ9BZI7 AL500527.2-201ENST00000454105 95 ntBASIC-0.85□□□□□ -2.55
UPF3BQ9BZI7 MIR2053-201ENST00000459295 91 ntBASIC-0.85□□□□□ -2.55
UPF3BQ9BZI7 RNU7-96P-201ENST00000459535 64 ntBASIC-0.85□□□□□ -2.55
UPF3BQ9BZI7 Y_RNA.754-201ENST00000476024 102 ntBASIC-0.85□□□□□ -2.55
UPF3BQ9BZI7 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.85□□□□□ -2.55
UPF3BQ9BZI7 RN7SKP295-201ENST00000517264 153 ntBASIC-0.85□□□□□ -2.55
UPF3BQ9BZI7 AC119751.7-201ENST00000600494 245 ntBASIC-0.85□□□□□ -2.55
UPF3BQ9BZI7 Y_RNA.790-201ENST00000614282 102 ntBASIC-0.85□□□□□ -2.55
UPF3BQ9BZI7 Y_RNA.782-201ENST00000614695 102 ntBASIC-0.85□□□□□ -2.55
UPF3BQ9BZI7 Y_RNA.38-201ENST00000362617 102 ntBASIC-0.86□□□□□ -2.55
UPF3BQ9BZI7 SNORD114-25-201ENST00000363742 72 ntBASIC-0.86□□□□□ -2.55
UPF3BQ9BZI7 U8.6-201ENST00000364939 135 ntBASIC-0.86□□□□□ -2.55
UPF3BQ9BZI7 SNORA1-201ENST00000384107 130 ntBASIC-0.86□□□□□ -2.55
UPF3BQ9BZI7 RNY3P4-201ENST00000384428 101 ntBASIC-0.86□□□□□ -2.55
UPF3BQ9BZI7 RNU6-831P-201ENST00000384548 107 ntBASIC-0.86□□□□□ -2.55
UPF3BQ9BZI7 Y_RNA.587-201ENST00000391210 103 ntBASIC-0.86□□□□□ -2.55
UPF3BQ9BZI7 SNORD115-47-201ENST00000391226 86 ntBASIC-0.86□□□□□ -2.55
UPF3BQ9BZI7 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-0.86□□□□□ -2.55
UPF3BQ9BZI7 RNU6-998P-201ENST00000515894 101 ntBASIC-0.86□□□□□ -2.55
UPF3BQ9BZI7 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.86□□□□□ -2.55
UPF3BQ9BZI7 RNU6-1016P-201ENST00000516689 94 ntBASIC-0.86□□□□□ -2.55
UPF3BQ9BZI7 AC105081.1-201ENST00000617727 106 ntBASIC-0.86□□□□□ -2.55
UPF3BQ9BZI7 MIR6717-201ENST00000622747 73 ntBASIC-0.86□□□□□ -2.55
UPF3BQ9BZI7 Y_RNA.592-201ENST00000410274 109 ntBASIC-0.87□□□□□ -2.55
UPF3BQ9BZI7 RNU6-1050P-201ENST00000410388 107 ntBASIC-0.87□□□□□ -2.55
UPF3BQ9BZI7 RNU6-373P-201ENST00000411247 98 ntBASIC-0.87□□□□□ -2.55
UPF3BQ9BZI7 AC024067.1-201ENST00000426199 223 ntBASIC-0.87□□□□□ -2.55
UPF3BQ9BZI7 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC-0.87□□□□□ -2.55
UPF3BQ9BZI7 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.87□□□□□ -2.55
UPF3BQ9BZI7 MTND5P5-201ENST00000503764 376 ntBASIC-0.87□□□□□ -2.55
UPF3BQ9BZI7 SNORD36C-201ENST00000516733 66 ntBASIC-0.87□□□□□ -2.55
UPF3BQ9BZI7 RNU7-149P-201ENST00000516739 59 ntBASIC-0.87□□□□□ -2.55
UPF3BQ9BZI7 RNU6-1314P-201ENST00000517139 104 ntBASIC-0.87□□□□□ -2.55
UPF3BQ9BZI7 AC141846.1-201ENST00000568348 142 ntBASIC-0.87□□□□□ -2.55
UPF3BQ9BZI7 MIR4790-201ENST00000577799 79 ntBASIC-0.87□□□□□ -2.55
UPF3BQ9BZI7 AC005357.1-201ENST00000588399 301 ntBASIC-0.87□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms