Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 AP002963.1-201ENST00000530590 184 ntBASIC-1.97□□□□□ -2.72
SCAPERQ9BY12 MIR3920-201ENST00000581751 86 ntBASIC-1.97□□□□□ -2.72
SCAPERQ9BY12 AC018714.1-201ENST00000605028 208 ntBASIC-1.97□□□□□ -2.72
SCAPERQ9BY12 Y_RNA.263-201ENST00000364659 114 ntBASIC-1.98□□□□□ -2.73
SCAPERQ9BY12 RNU6-1257P-201ENST00000384625 110 ntBASIC-1.98□□□□□ -2.73
SCAPERQ9BY12 RNU6-938P-201ENST00000411285 103 ntBASIC-1.98□□□□□ -2.73
SCAPERQ9BY12 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC-1.98□□□□□ -2.73
SCAPERQ9BY12 RNU7-134P-201ENST00000458997 64 ntBASIC-1.98□□□□□ -2.73
SCAPERQ9BY12 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC-1.98□□□□□ -2.73
SCAPERQ9BY12 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC-1.98□□□□□ -2.73
SCAPERQ9BY12 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC-1.98□□□□□ -2.73
SCAPERQ9BY12 MIR548H5-201ENST00000580314 60 ntBASIC-1.98□□□□□ -2.73
SCAPERQ9BY12 AC087752.4-201ENST00000605911 462 ntBASIC-1.98□□□□□ -2.73
SCAPERQ9BY12 AC004467.1-201ENST00000615678 330 ntBASIC-1.98□□□□□ -2.73
SCAPERQ9BY12 Y_RNA.323-201ENST00000365157 109 ntBASIC-1.99□□□□□ -2.73
SCAPERQ9BY12 RNU6-1203P-201ENST00000410703 110 ntBASIC-1.99□□□□□ -2.73
SCAPERQ9BY12 AC009961.2-201ENST00000435771 251 ntBASIC-1.99□□□□□ -2.73
SCAPERQ9BY12 RNU7-187P-201ENST00000458985 68 ntBASIC-1.99□□□□□ -2.73
SCAPERQ9BY12 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.99□□□□□ -2.73
SCAPERQ9BY12 Y_RNA.715-201ENST00000517082 110 ntBASIC-1.99□□□□□ -2.73
SCAPERQ9BY12 SNORA40.17-201ENST00000517256 115 ntBASIC-1.99□□□□□ -2.73
SCAPERQ9BY12 AP003733.2-201ENST00000529409 171 ntBASIC-1.99□□□□□ -2.73
SCAPERQ9BY12 MIR5704-201ENST00000584029 77 ntBASIC-1.99□□□□□ -2.73
SCAPERQ9BY12 AC011603.4-201ENST00000611325 277 ntBASIC-1.99□□□□□ -2.73
SCAPERQ9BY12 MIR6854-201ENST00000614935 69 ntBASIC-1.99□□□□□ -2.73
SCAPERQ9BY12 Y_RNA.7-201ENST00000362352 102 ntBASIC-2□□□□□ -2.73
SCAPERQ9BY12 Y_RNA.106-201ENST00000363189 100 ntBASIC-2□□□□□ -2.73
SCAPERQ9BY12 RNU5F-7P-201ENST00000363696 115 ntBASIC-2□□□□□ -2.73
SCAPERQ9BY12 MIR889-201ENST00000401280 79 ntBASIC-2□□□□□ -2.73
SCAPERQ9BY12 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC-2□□□□□ -2.73
SCAPERQ9BY12 MTND3P8-201ENST00000412909 339 ntBASIC-2□□□□□ -2.73
SCAPERQ9BY12 RNU6-998P-201ENST00000515894 101 ntBASIC-2□□□□□ -2.73
SCAPERQ9BY12 SNORA40.9-201ENST00000515895 93 ntBASIC-2□□□□□ -2.73
SCAPERQ9BY12 Y_RNA.706-201ENST00000516933 99 ntBASIC-2□□□□□ -2.73
SCAPERQ9BY12 AC245014.2-201ENST00000603689 287 ntBASIC-2□□□□□ -2.73
SCAPERQ9BY12 AC092747.3-201ENST00000603769 301 ntBASIC-2□□□□□ -2.73
SCAPERQ9BY12 AP003357.1-201ENST00000604497 148 ntBASIC-2□□□□□ -2.73
SCAPERQ9BY12 RNU6-449P-201ENST00000383914 107 ntBASIC-2□□□□□ -2.73
SCAPERQ9BY12 MIR527-201ENST00000385244 85 ntBASIC-2□□□□□ -2.73
SCAPERQ9BY12 AL606923.1-201ENST00000406616 190 ntBASIC-2□□□□□ -2.73
SCAPERQ9BY12 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC-2□□□□□ -2.73
SCAPERQ9BY12 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC-2□□□□□ -2.73
SCAPERQ9BY12 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC-2□□□□□ -2.73
SCAPERQ9BY12 ACA59.1-201ENST00000515966 143 ntBASIC-2□□□□□ -2.73
SCAPERQ9BY12 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC-2□□□□□ -2.73
SCAPERQ9BY12 MIR548AE1-201ENST00000583292 70 ntBASIC-2□□□□□ -2.73
SCAPERQ9BY12 MIR4999-201ENST00000585029 91 ntBASIC-2□□□□□ -2.73
SCAPERQ9BY12 MIR4424-201ENST00000585257 86 ntBASIC-2□□□□□ -2.73
SCAPERQ9BY12 MIR8068-201ENST00000618032 68 ntBASIC-2□□□□□ -2.73
SCAPERQ9BY12 RNA5SP133-201ENST00000363368 119 ntBASIC-2.01□□□□□ -2.73
SCAPERQ9BY12 RNU6-973P-201ENST00000364690 107 ntBASIC-2.01□□□□□ -2.73
SCAPERQ9BY12 RNY1P13-201ENST00000365030 105 ntBASIC-2.01□□□□□ -2.73
SCAPERQ9BY12 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC-2.01□□□□□ -2.73
SCAPERQ9BY12 MTND1P27-201ENST00000451117 902 ntBASIC-2.01□□□□□ -2.73
SCAPERQ9BY12 SNORA19.2-201ENST00000516013 114 ntBASIC-2.01□□□□□ -2.73
SCAPERQ9BY12 AC092954.2-201ENST00000609103 430 ntBASIC-2.01□□□□□ -2.73
SCAPERQ9BY12 Y_RNA.430-201ENST00000384081 110 ntBASIC-2.02□□□□□ -2.73
SCAPERQ9BY12 MTCYBP8-201ENST00000422855 651 ntBASIC-2.02□□□□□ -2.73
SCAPERQ9BY12 SNORD18.2-201ENST00000459604 70 ntBASIC-2.02□□□□□ -2.73
SCAPERQ9BY12 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC-2.02□□□□□ -2.73
SCAPERQ9BY12 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-2.02□□□□□ -2.73
SCAPERQ9BY12 RNU7-10P-201ENST00000607194 63 ntBASIC-2.02□□□□□ -2.73
SCAPERQ9BY12 MIR599-201ENST00000385069 95 ntBASIC-2.03□□□□□ -2.73
SCAPERQ9BY12 AC244090.1-201ENST00000441884 93 ntBASIC-2.03□□□□□ -2.73
SCAPERQ9BY12 Y_RNA.802-201ENST00000614892 130 ntBASIC-2.03□□□□□ -2.73
SCAPERQ9BY12 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC-2.03□□□□□ -2.73
SCAPERQ9BY12 Y_RNA.190-201ENST00000363964 101 ntBASIC-2.04□□□□□ -2.74
SCAPERQ9BY12 RNU6-879P-201ENST00000364328 108 ntBASIC-2.04□□□□□ -2.74
SCAPERQ9BY12 RNU6-1201P-201ENST00000384227 107 ntBASIC-2.04□□□□□ -2.74
SCAPERQ9BY12 RNU6-540P-201ENST00000384622 101 ntBASIC-2.04□□□□□ -2.74
SCAPERQ9BY12 UBE2V1P7-201ENST00000446395 340 ntBASIC-2.04□□□□□ -2.74
SCAPERQ9BY12 SNORD11-201ENST00000459124 84 ntBASIC-2.04□□□□□ -2.74
SCAPERQ9BY12 RNU6-983P-201ENST00000516004 103 ntBASIC-2.04□□□□□ -2.74
SCAPERQ9BY12 AL445584.3-201ENST00000617173 78 ntBASIC-2.04□□□□□ -2.74
SCAPERQ9BY12 SNORD115-25-201ENST00000362619 82 ntBASIC-2.05□□□□□ -2.74
SCAPERQ9BY12 SNORD114-17-201ENST00000364699 75 ntBASIC-2.05□□□□□ -2.74
SCAPERQ9BY12 AC093423.1-201ENST00000440817 142 ntBASIC-2.05□□□□□ -2.74
SCAPERQ9BY12 AC127455.1-201ENST00000565496 145 ntBASIC-2.05□□□□□ -2.74
SCAPERQ9BY12 AC008536.2-201ENST00000607284 349 ntBASIC-2.05□□□□□ -2.74
SCAPERQ9BY12 RNU6-1125P-201ENST00000363601 107 ntBASIC-2.06□□□□□ -2.74
SCAPERQ9BY12 Y_RNA.225-201ENST00000364326 97 ntBASIC-2.06□□□□□ -2.74
SCAPERQ9BY12 RNU6-282P-201ENST00000365357 103 ntBASIC-2.06□□□□□ -2.74
SCAPERQ9BY12 Y_RNA.407-201ENST00000383986 113 ntBASIC-2.06□□□□□ -2.74
SCAPERQ9BY12 RNU6-905P-201ENST00000384434 107 ntBASIC-2.06□□□□□ -2.74
SCAPERQ9BY12 MIR496-201ENST00000385226 102 ntBASIC-2.06□□□□□ -2.74
SCAPERQ9BY12 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-2.06□□□□□ -2.74
SCAPERQ9BY12 MIR1278-201ENST00000408753 81 ntBASIC-2.06□□□□□ -2.74
SCAPERQ9BY12 RNU7-13P-201ENST00000516413 62 ntBASIC-2.06□□□□□ -2.74
SCAPERQ9BY12 AL442663.2-201ENST00000554385 511 ntBASIC-2.06□□□□□ -2.74
SCAPERQ9BY12 RNU6-1120P-201ENST00000362988 108 ntBASIC-2.07□□□□□ -2.74
SCAPERQ9BY12 RNU4-50P-201ENST00000364361 141 ntBASIC-2.07□□□□□ -2.74
SCAPERQ9BY12 SNORD115-35-201ENST00000365122 82 ntBASIC-2.07□□□□□ -2.74
SCAPERQ9BY12 Y_RNA.358-201ENST00000365491 99 ntBASIC-2.07□□□□□ -2.74
SCAPERQ9BY12 MIR548K-201ENST00000408406 116 ntBASIC-2.07□□□□□ -2.74
SCAPERQ9BY12 RNU6-1086P-201ENST00000410930 100 ntBASIC-2.07□□□□□ -2.74
SCAPERQ9BY12 RNA5SP272-201ENST00000516095 111 ntBASIC-2.07□□□□□ -2.74
SCAPERQ9BY12 RNU6-436P-201ENST00000516171 114 ntBASIC-2.07□□□□□ -2.74
SCAPERQ9BY12 MTND5P40-201ENST00000559945 246 ntBASIC-2.07□□□□□ -2.74
SCAPERQ9BY12 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-2.07□□□□□ -2.74
SCAPERQ9BY12 MIR302B-201ENST00000362188 73 ntBASIC-2.08□□□□□ -2.74
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms