Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 RNU6-113P-201ENST00000516653 101 ntBASIC2.1□□□□□ -2.07
SALL3Q9BXA9 AC006441.5-201ENST00000612680 209 ntBASIC2.1□□□□□ -2.07
SALL3Q9BXA9 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.1□□□□□ -2.07
SALL3Q9BXA9 SNORA33-201ENST00000363664 130 ntBASIC2.09□□□□□ -2.08
SALL3Q9BXA9 Y_RNA.281-201ENST00000364774 94 ntBASIC2.09□□□□□ -2.08
SALL3Q9BXA9 RNU6-1107P-201ENST00000364817 104 ntBASIC2.09□□□□□ -2.08
SALL3Q9BXA9 RNU6-756P-201ENST00000383997 107 ntBASIC2.09□□□□□ -2.08
SALL3Q9BXA9 MIR489-201ENST00000384923 84 ntBASIC2.09□□□□□ -2.08
SALL3Q9BXA9 RNA5SP482-201ENST00000391269 118 ntBASIC2.09□□□□□ -2.08
SALL3Q9BXA9 AC099677.2-201ENST00000436385 175 ntBASIC2.09□□□□□ -2.08
SALL3Q9BXA9 RNU6-693P-201ENST00000516134 107 ntBASIC2.09□□□□□ -2.08
SALL3Q9BXA9 AC133485.4-201ENST00000561835 220 ntBASIC2.09□□□□□ -2.08
SALL3Q9BXA9 AC138907.4-201ENST00000570107 226 ntBASIC2.09□□□□□ -2.08
SALL3Q9BXA9 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.09□□□□□ -2.08
SALL3Q9BXA9 AC005786.1-201ENST00000588553 154 ntBASIC2.09□□□□□ -2.08
SALL3Q9BXA9 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.09□□□□□ -2.08
SALL3Q9BXA9 AL035470.1-201ENST00000622571 220 ntBASIC2.09□□□□□ -2.08
SALL3Q9BXA9 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.09□□□□□ -2.08
SALL3Q9BXA9 Y_RNA.73-201ENST00000362910 113 ntBASIC2.08□□□□□ -2.08
SALL3Q9BXA9 Y_RNA.410-201ENST00000383992 113 ntBASIC2.08□□□□□ -2.08
SALL3Q9BXA9 SNORD77.3-201ENST00000391113 65 ntBASIC2.08□□□□□ -2.08
SALL3Q9BXA9 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC2.08□□□□□ -2.08
SALL3Q9BXA9 Y_RNA.649-201ENST00000459077 103 ntBASIC2.08□□□□□ -2.08
SALL3Q9BXA9 RNA5SP236-201ENST00000516169 116 ntBASIC2.08□□□□□ -2.08
SALL3Q9BXA9 Y_RNA.666-201ENST00000516187 112 ntBASIC2.08□□□□□ -2.08
SALL3Q9BXA9 MIR3129-201ENST00000581095 76 ntBASIC2.08□□□□□ -2.08
SALL3Q9BXA9 AL022345.2-201ENST00000606307 135 ntBASIC2.08□□□□□ -2.08
SALL3Q9BXA9 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.07□□□□□ -2.08
SALL3Q9BXA9 RNU1-58P-201ENST00000362413 163 ntBASIC2.07□□□□□ -2.08
SALL3Q9BXA9 RNU6-23P-201ENST00000363283 107 ntBASIC2.07□□□□□ -2.08
SALL3Q9BXA9 Y_RNA.163-201ENST00000363702 113 ntBASIC2.07□□□□□ -2.08
SALL3Q9BXA9 Y_RNA.336-201ENST00000365307 109 ntBASIC2.07□□□□□ -2.08
SALL3Q9BXA9 RNU6-820P-201ENST00000384273 107 ntBASIC2.07□□□□□ -2.08
SALL3Q9BXA9 MIR548A2-201ENST00000384956 97 ntBASIC2.07□□□□□ -2.08
SALL3Q9BXA9 MIR590-201ENST00000385008 97 ntBASIC2.07□□□□□ -2.08
SALL3Q9BXA9 MIR450A2-201ENST00000385022 100 ntBASIC2.07□□□□□ -2.08
SALL3Q9BXA9 RNU6-321P-201ENST00000410912 106 ntBASIC2.07□□□□□ -2.08
SALL3Q9BXA9 AC108667.1-201ENST00000428618 249 ntBASIC2.07□□□□□ -2.08
SALL3Q9BXA9 RNA5SP57-201ENST00000459463 123 ntBASIC2.07□□□□□ -2.08
SALL3Q9BXA9 RPL23AP63-201ENST00000498752 471 ntBASIC2.07□□□□□ -2.08
SALL3Q9BXA9 RN7SKP19-201ENST00000516016 252 ntBASIC2.07□□□□□ -2.08
SALL3Q9BXA9 MIR514B-201ENST00000516774 80 ntBASIC2.07□□□□□ -2.08
SALL3Q9BXA9 AC022217.4-201ENST00000604389 163 ntBASIC2.07□□□□□ -2.08
SALL3Q9BXA9 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.07□□□□□ -2.08
SALL3Q9BXA9 MIR8070-201ENST00000616510 88 ntBASIC2.07□□□□□ -2.08
SALL3Q9BXA9 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.07□□□□□ -2.08
SALL3Q9BXA9 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
SALL3Q9BXA9 Y_RNA.85-201ENST00000363014 111 ntBASIC2.06□□□□□ -2.08
SALL3Q9BXA9 Y_RNA.313-201ENST00000365095 103 ntBASIC2.06□□□□□ -2.08
SALL3Q9BXA9 Y_RNA.342-201ENST00000365352 113 ntBASIC2.06□□□□□ -2.08
SALL3Q9BXA9 Y_RNA.346-201ENST00000365385 112 ntBASIC2.06□□□□□ -2.08
SALL3Q9BXA9 RNU6-442P-201ENST00000383968 104 ntBASIC2.06□□□□□ -2.08
SALL3Q9BXA9 MIR518A2-201ENST00000384966 87 ntBASIC2.06□□□□□ -2.08
SALL3Q9BXA9 MIR518F-201ENST00000384973 87 ntBASIC2.06□□□□□ -2.08
SALL3Q9BXA9 AL627390.1-201ENST00000396055 340 ntBASIC2.06□□□□□ -2.08
SALL3Q9BXA9 SNRPGP14-201ENST00000435400 219 ntBASIC2.06□□□□□ -2.08
SALL3Q9BXA9 SCARNA15-202ENST00000516881 127 ntBASIC2.06□□□□□ -2.08
SALL3Q9BXA9 MIR3683-201ENST00000580847 82 ntBASIC2.06□□□□□ -2.08
SALL3Q9BXA9 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
SALL3Q9BXA9 AL121890.5-201ENST00000620848 304 ntBASIC2.06□□□□□ -2.08
SALL3Q9BXA9 AC022513.1-201ENST00000624512 117 ntBASIC2.06□□□□□ -2.08
SALL3Q9BXA9 AL359851.1-201ENST00000569460 4997 ntBASIC2.05□□□□□ -2.08
SALL3Q9BXA9 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.05□□□□□ -2.08
SALL3Q9BXA9 RNU6-1019P-201ENST00000364424 107 ntBASIC2.05□□□□□ -2.08
SALL3Q9BXA9 snoU2-30.1-201ENST00000365012 70 ntBASIC2.05□□□□□ -2.08
SALL3Q9BXA9 RNU6-1296P-201ENST00000383879 107 ntBASIC2.05□□□□□ -2.08
SALL3Q9BXA9 SNORA51.5-201ENST00000384126 131 ntBASIC2.05□□□□□ -2.08
SALL3Q9BXA9 TRMT112P2-201ENST00000512910 132 ntBASIC2.05□□□□□ -2.08
SALL3Q9BXA9 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.05□□□□□ -2.08
SALL3Q9BXA9 MIR3618-201ENST00000580330 88 ntBASIC2.05□□□□□ -2.08
SALL3Q9BXA9 RNU6-1084P-201ENST00000362498 107 ntBASIC2.04□□□□□ -2.08
SALL3Q9BXA9 SNORD14E-201ENST00000364009 85 ntBASIC2.04□□□□□ -2.08
SALL3Q9BXA9 MIR7-2-201ENST00000384970 110 ntBASIC2.04□□□□□ -2.08
SALL3Q9BXA9 RNU6-788P-201ENST00000390967 104 ntBASIC2.04□□□□□ -2.08
SALL3Q9BXA9 RNU6-279P-201ENST00000391297 101 ntBASIC2.04□□□□□ -2.08
SALL3Q9BXA9 AL356379.1-201ENST00000414105 126 ntBASIC2.04□□□□□ -2.08
SALL3Q9BXA9 AC069257.2-201ENST00000441819 155 ntBASIC2.04□□□□□ -2.08
SALL3Q9BXA9 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.04□□□□□ -2.08
SALL3Q9BXA9 AC022137.1-201ENST00000483735 151 ntBASIC2.04□□□□□ -2.08
SALL3Q9BXA9 SNORA40.13-201ENST00000516379 120 ntBASIC2.04□□□□□ -2.08
SALL3Q9BXA9 RNU6-1270P-201ENST00000517128 108 ntBASIC2.04□□□□□ -2.08
SALL3Q9BXA9 AC026421.1-201ENST00000519101 163 ntBASIC2.04□□□□□ -2.08
SALL3Q9BXA9 MIR5197-201ENST00000583721 112 ntBASIC2.04□□□□□ -2.08
SALL3Q9BXA9 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.04□□□□□ -2.08
SALL3Q9BXA9 SNORA28-201ENST00000606769 126 ntBASIC2.04□□□□□ -2.08
SALL3Q9BXA9 MIR8081-201ENST00000611533 95 ntBASIC2.04□□□□□ -2.08
SALL3Q9BXA9 MALAT1.1-201ENST00000618249 95 ntBASIC2.04□□□□□ -2.08
SALL3Q9BXA9 Y_RNA.17-201ENST00000362433 111 ntBASIC2.03□□□□□ -2.08
SALL3Q9BXA9 SNORD68-201ENST00000363214 84 ntBASIC2.03□□□□□ -2.08
SALL3Q9BXA9 RNU6-268P-201ENST00000364174 107 ntBASIC2.03□□□□□ -2.08
SALL3Q9BXA9 SNORD12C-201ENST00000386307 89 ntBASIC2.03□□□□□ -2.08
SALL3Q9BXA9 MIR802-201ENST00000390235 94 ntBASIC2.03□□□□□ -2.08
SALL3Q9BXA9 MIR676-201ENST00000390702 67 ntBASIC2.03□□□□□ -2.08
SALL3Q9BXA9 AC245047.3-201ENST00000429428 127 ntBASIC2.03□□□□□ -2.08
SALL3Q9BXA9 CALM2P4-201ENST00000430810 426 ntBASIC2.03□□□□□ -2.08
SALL3Q9BXA9 MTATP8P2-201ENST00000435212 202 ntBASIC2.03□□□□□ -2.08
SALL3Q9BXA9 RPS26P48-201ENST00000491713 339 ntBASIC2.03□□□□□ -2.08
SALL3Q9BXA9 SNORD45.4-201ENST00000516629 73 ntBASIC2.03□□□□□ -2.08
SALL3Q9BXA9 snoMBII-202.2-201ENST00000517263 86 ntBASIC2.03□□□□□ -2.08
SALL3Q9BXA9 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 223.4 ms