Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 RNU7-34P-201ENST00000459394 64 ntBASIC2.08□□□□□ -2.08
LRFN3Q9BTN0 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.08□□□□□ -2.08
LRFN3Q9BTN0 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.08□□□□□ -2.08
LRFN3Q9BTN0 MIR376A2-201ENST00000636782 80 ntBASIC2.08□□□□□ -2.08
LRFN3Q9BTN0 MIR4679-1-201ENST00000637619 75 ntBASIC2.08□□□□□ -2.08
LRFN3Q9BTN0 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
LRFN3Q9BTN0 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
LRFN3Q9BTN0 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
LRFN3Q9BTN0 MIR450A1-201ENST00000362262 91 ntBASIC2.07□□□□□ -2.08
LRFN3Q9BTN0 Y_RNA.366-201ENST00000365540 102 ntBASIC2.07□□□□□ -2.08
LRFN3Q9BTN0 Y_RNA.528-201ENST00000384575 108 ntBASIC2.07□□□□□ -2.08
LRFN3Q9BTN0 RNU6-1031P-201ENST00000384773 107 ntBASIC2.07□□□□□ -2.08
LRFN3Q9BTN0 AL356379.1-201ENST00000414105 126 ntBASIC2.07□□□□□ -2.08
LRFN3Q9BTN0 CALM2P4-201ENST00000430810 426 ntBASIC2.07□□□□□ -2.08
LRFN3Q9BTN0 STAG3L5P-204ENST00000443759 179 ntBASIC2.07□□□□□ -2.08
LRFN3Q9BTN0 RNU6-113P-201ENST00000516653 101 ntBASIC2.07□□□□□ -2.08
LRFN3Q9BTN0 AL137847.3-201ENST00000611521 109 ntBASIC2.07□□□□□ -2.08
LRFN3Q9BTN0 uc_338.28-201ENST00000612082 187 ntBASIC2.07□□□□□ -2.08
LRFN3Q9BTN0 AL596028.1-201ENST00000326971 197 ntBASIC2.06□□□□□ -2.08
LRFN3Q9BTN0 Y_RNA.281-201ENST00000364774 94 ntBASIC2.06□□□□□ -2.08
LRFN3Q9BTN0 Y_RNA.495-201ENST00000384435 112 ntBASIC2.06□□□□□ -2.08
LRFN3Q9BTN0 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
LRFN3Q9BTN0 AL627390.1-201ENST00000396055 340 ntBASIC2.06□□□□□ -2.08
LRFN3Q9BTN0 AL031737.1-201ENST00000450125 223 ntBASIC2.06□□□□□ -2.08
LRFN3Q9BTN0 SNORA31.10-201ENST00000516482 106 ntBASIC2.06□□□□□ -2.08
LRFN3Q9BTN0 MIR5197-201ENST00000583721 112 ntBASIC2.06□□□□□ -2.08
LRFN3Q9BTN0 AL512598.1-201ENST00000610158 273 ntBASIC2.06□□□□□ -2.08
LRFN3Q9BTN0 AL137067.1-201ENST00000615933 120 ntBASIC2.06□□□□□ -2.08
LRFN3Q9BTN0 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.06□□□□□ -2.08
LRFN3Q9BTN0 SNORD114-22-201ENST00000365423 72 ntBASIC2.05□□□□□ -2.08
LRFN3Q9BTN0 RNU6-106P-201ENST00000384405 107 ntBASIC2.05□□□□□ -2.08
LRFN3Q9BTN0 MIR570-201ENST00000384917 97 ntBASIC2.05□□□□□ -2.08
LRFN3Q9BTN0 RNA5SP136-201ENST00000410906 107 ntBASIC2.05□□□□□ -2.08
LRFN3Q9BTN0 AC007012.1-201ENST00000567192 175 ntBASIC2.05□□□□□ -2.08
LRFN3Q9BTN0 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.05□□□□□ -2.08
LRFN3Q9BTN0 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
LRFN3Q9BTN0 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
LRFN3Q9BTN0 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
LRFN3Q9BTN0 MIR21-201ENST00000362134 72 ntBASIC2.04□□□□□ -2.08
LRFN3Q9BTN0 SNORD68-201ENST00000363214 84 ntBASIC2.04□□□□□ -2.08
LRFN3Q9BTN0 SNORA4.2-201ENST00000365313 147 ntBASIC2.04□□□□□ -2.08
LRFN3Q9BTN0 RNU6-32P-201ENST00000383948 107 ntBASIC2.04□□□□□ -2.08
LRFN3Q9BTN0 RNU6-13P-201ENST00000384248 107 ntBASIC2.04□□□□□ -2.08
LRFN3Q9BTN0 RNU6-12P-201ENST00000384604 107 ntBASIC2.04□□□□□ -2.08
LRFN3Q9BTN0 RNU6-41P-201ENST00000384741 107 ntBASIC2.04□□□□□ -2.08
LRFN3Q9BTN0 MIR802-201ENST00000390235 94 ntBASIC2.04□□□□□ -2.08
LRFN3Q9BTN0 PGBD4P5-201ENST00000445958 426 ntBASIC2.04□□□□□ -2.08
LRFN3Q9BTN0 RNU6-412P-201ENST00000516434 106 ntBASIC2.04□□□□□ -2.08
LRFN3Q9BTN0 Y_RNA.694-201ENST00000516677 117 ntBASIC2.04□□□□□ -2.08
LRFN3Q9BTN0 RNA5SP102-201ENST00000516865 106 ntBASIC2.04□□□□□ -2.08
LRFN3Q9BTN0 MIR4762-201ENST00000585261 75 ntBASIC2.04□□□□□ -2.08
LRFN3Q9BTN0 AC006441.5-201ENST00000612680 209 ntBASIC2.04□□□□□ -2.08
LRFN3Q9BTN0 AC134878.1-201ENST00000619901 243 ntBASIC2.04□□□□□ -2.08
LRFN3Q9BTN0 U8.5-201ENST00000364528 136 ntBASIC2.03□□□□□ -2.08
LRFN3Q9BTN0 RNU6-1107P-201ENST00000364817 104 ntBASIC2.03□□□□□ -2.08
LRFN3Q9BTN0 Y_RNA.410-201ENST00000383992 113 ntBASIC2.03□□□□□ -2.08
LRFN3Q9BTN0 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
LRFN3Q9BTN0 SNORA48.3-201ENST00000391081 134 ntBASIC2.03□□□□□ -2.08
LRFN3Q9BTN0 MIR548O-201ENST00000408583 114 ntBASIC2.03□□□□□ -2.08
LRFN3Q9BTN0 RNU6-554P-201ENST00000410466 106 ntBASIC2.03□□□□□ -2.08
LRFN3Q9BTN0 SNRPGP14-201ENST00000435400 219 ntBASIC2.03□□□□□ -2.08
LRFN3Q9BTN0 JTBP1-201ENST00000441314 247 ntBASIC2.03□□□□□ -2.08
LRFN3Q9BTN0 COX6CP6-201ENST00000490840 228 ntBASIC2.03□□□□□ -2.08
LRFN3Q9BTN0 RPS26P48-201ENST00000491713 339 ntBASIC2.03□□□□□ -2.08
LRFN3Q9BTN0 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.03□□□□□ -2.08
LRFN3Q9BTN0 RNU7-25P-201ENST00000516544 62 ntBASIC2.03□□□□□ -2.08
LRFN3Q9BTN0 AL096840.1-201ENST00000603287 93 ntBASIC2.03□□□□□ -2.08
LRFN3Q9BTN0 MIR8074-201ENST00000615081 81 ntBASIC2.03□□□□□ -2.08
LRFN3Q9BTN0 AL513423.1-201ENST00000621695 132 ntBASIC2.03□□□□□ -2.08
LRFN3Q9BTN0 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.02□□□□□ -2.09
LRFN3Q9BTN0 RNU6-1123P-201ENST00000362347 106 ntBASIC2.02□□□□□ -2.09
LRFN3Q9BTN0 Y_RNA.85-201ENST00000363014 111 ntBASIC2.02□□□□□ -2.09
LRFN3Q9BTN0 SNORD14E-201ENST00000364009 85 ntBASIC2.02□□□□□ -2.09
LRFN3Q9BTN0 RNU6-268P-201ENST00000364174 107 ntBASIC2.02□□□□□ -2.09
LRFN3Q9BTN0 SNORA2.2-201ENST00000365473 135 ntBASIC2.02□□□□□ -2.09
LRFN3Q9BTN0 RNU6-1189P-201ENST00000383958 107 ntBASIC2.02□□□□□ -2.09
LRFN3Q9BTN0 RNU6-442P-201ENST00000383968 104 ntBASIC2.02□□□□□ -2.09
LRFN3Q9BTN0 Y_RNA.549-201ENST00000384657 102 ntBASIC2.02□□□□□ -2.09
LRFN3Q9BTN0 SNORD12C-201ENST00000386307 89 ntBASIC2.02□□□□□ -2.09
LRFN3Q9BTN0 MIR1267-201ENST00000408723 78 ntBASIC2.02□□□□□ -2.09
LRFN3Q9BTN0 RNU1-123P-201ENST00000458950 160 ntBASIC2.02□□□□□ -2.09
LRFN3Q9BTN0 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.02□□□□□ -2.09
LRFN3Q9BTN0 RNU6-240P-201ENST00000516098 97 ntBASIC2.02□□□□□ -2.09
LRFN3Q9BTN0 MIR514B-201ENST00000516774 80 ntBASIC2.02□□□□□ -2.09
LRFN3Q9BTN0 MIR5582-201ENST00000579697 68 ntBASIC2.02□□□□□ -2.09
LRFN3Q9BTN0 AC006254.2-201ENST00000603259 279 ntBASIC2.02□□□□□ -2.09
LRFN3Q9BTN0 MIR8081-201ENST00000611533 95 ntBASIC2.02□□□□□ -2.09
LRFN3Q9BTN0 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
LRFN3Q9BTN0 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
LRFN3Q9BTN0 RNU6-1084P-201ENST00000362498 107 ntBASIC2.01□□□□□ -2.09
LRFN3Q9BTN0 Y_RNA.30-201ENST00000362572 97 ntBASIC2.01□□□□□ -2.09
LRFN3Q9BTN0 Y_RNA.547-201ENST00000384654 119 ntBASIC2.01□□□□□ -2.09
LRFN3Q9BTN0 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.01□□□□□ -2.09
LRFN3Q9BTN0 RPS29P24-201ENST00000486345 171 ntBASIC2.01□□□□□ -2.09
LRFN3Q9BTN0 MIR4285-201ENST00000581001 85 ntBASIC2.01□□□□□ -2.09
LRFN3Q9BTN0 AC084768.2-201ENST00000622736 221 ntBASIC2.01□□□□□ -2.09
LRFN3Q9BTN0 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
LRFN3Q9BTN0 Y_RNA.37-201ENST00000362606 108 ntBASIC2□□□□□ -2.09
LRFN3Q9BTN0 SNORD115-28-201ENST00000363931 81 ntBASIC2□□□□□ -2.09
LRFN3Q9BTN0 snoU2-30.1-201ENST00000365012 70 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 174.5 ms