Protein–RNA interactions for Protein: Q96SB8

SMC6, Structural maintenance of chromosomes protein 6, humanhuman

Predictions only

Length 1,091 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6Q96SB8 AL365205.2-201ENST00000594586 68 ntBASIC1.17□□□□□ -2.22
SMC6Q96SB8 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
SMC6Q96SB8 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.16□□□□□ -2.22
SMC6Q96SB8 Y_RNA.23-201ENST00000362496 106 ntBASIC1.16□□□□□ -2.22
SMC6Q96SB8 SNORA25.3-201ENST00000363205 127 ntBASIC1.16□□□□□ -2.22
SMC6Q96SB8 RNU6-200P-201ENST00000364743 107 ntBASIC1.16□□□□□ -2.22
SMC6Q96SB8 SNORA22-201ENST00000383907 134 ntBASIC1.16□□□□□ -2.22
SMC6Q96SB8 Y_RNA.410-201ENST00000383992 113 ntBASIC1.16□□□□□ -2.22
SMC6Q96SB8 SNORA70.7-201ENST00000384159 133 ntBASIC1.16□□□□□ -2.22
SMC6Q96SB8 SNORA22C-201ENST00000384614 134 ntBASIC1.16□□□□□ -2.22
SMC6Q96SB8 Y_RNA.542-201ENST00000384641 111 ntBASIC1.16□□□□□ -2.22
SMC6Q96SB8 MIR570-201ENST00000384917 97 ntBASIC1.16□□□□□ -2.22
SMC6Q96SB8 AL392103.1-201ENST00000447000 198 ntBASIC1.16□□□□□ -2.22
SMC6Q96SB8 RPS23P4-201ENST00000487908 423 ntBASIC1.16□□□□□ -2.22
SMC6Q96SB8 RNU7-40P-201ENST00000516397 64 ntBASIC1.16□□□□□ -2.22
SMC6Q96SB8 AC134878.1-201ENST00000619901 243 ntBASIC1.16□□□□□ -2.22
SMC6Q96SB8 AC078938.1-201ENST00000620993 318 ntBASIC1.16□□□□□ -2.22
SMC6Q96SB8 RNA5SP264-201ENST00000363115 107 ntBASIC1.15□□□□□ -2.23
SMC6Q96SB8 RNU6-978P-201ENST00000364371 103 ntBASIC1.15□□□□□ -2.23
SMC6Q96SB8 Y_RNA.412-201ENST00000384001 104 ntBASIC1.15□□□□□ -2.23
SMC6Q96SB8 Y_RNA.515-201ENST00000384535 112 ntBASIC1.15□□□□□ -2.23
SMC6Q96SB8 RNU4-70P-201ENST00000384579 139 ntBASIC1.15□□□□□ -2.23
SMC6Q96SB8 SNORA40.5-201ENST00000391061 128 ntBASIC1.15□□□□□ -2.23
SMC6Q96SB8 MIR1302-7-201ENST00000408841 72 ntBASIC1.15□□□□□ -2.23
SMC6Q96SB8 RNU6-847P-201ENST00000411115 108 ntBASIC1.15□□□□□ -2.23
SMC6Q96SB8 RPS26P48-201ENST00000491713 339 ntBASIC1.15□□□□□ -2.23
SMC6Q96SB8 Y_RNA.797-201ENST00000515977 94 ntBASIC1.15□□□□□ -2.23
SMC6Q96SB8 SNORD79.1-201ENST00000516069 84 ntBASIC1.15□□□□□ -2.23
SMC6Q96SB8 RNU11-2P-201ENST00000516898 142 ntBASIC1.15□□□□□ -2.23
SMC6Q96SB8 RNU6-388P-201ENST00000517012 105 ntBASIC1.15□□□□□ -2.23
SMC6Q96SB8 RNU6-389P-201ENST00000517048 105 ntBASIC1.15□□□□□ -2.23
SMC6Q96SB8 MIR4791-201ENST00000607666 84 ntBASIC1.15□□□□□ -2.23
SMC6Q96SB8 RNU6-1020P-201ENST00000363684 107 ntBASIC1.14□□□□□ -2.23
SMC6Q96SB8 Y_RNA.257-201ENST00000364596 102 ntBASIC1.14□□□□□ -2.23
SMC6Q96SB8 RNU6-53P-201ENST00000365367 106 ntBASIC1.14□□□□□ -2.23
SMC6Q96SB8 RNU6-1292P-201ENST00000383856 107 ntBASIC1.14□□□□□ -2.23
SMC6Q96SB8 RNU6-47P-201ENST00000383866 107 ntBASIC1.14□□□□□ -2.23
SMC6Q96SB8 Y_RNA.785-201ENST00000384290 109 ntBASIC1.14□□□□□ -2.23
SMC6Q96SB8 RNU6-1067P-201ENST00000384752 107 ntBASIC1.14□□□□□ -2.23
SMC6Q96SB8 MIR19B1-201ENST00000384829 87 ntBASIC1.14□□□□□ -2.23
SMC6Q96SB8 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
SMC6Q96SB8 MIR1185-1-201ENST00000408598 86 ntBASIC1.14□□□□□ -2.23
SMC6Q96SB8 AF228730.3-201ENST00000436691 102 ntBASIC1.14□□□□□ -2.23
SMC6Q96SB8 MIR4251-201ENST00000635819 61 ntBASIC1.14□□□□□ -2.23
SMC6Q96SB8 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
SMC6Q96SB8 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
SMC6Q96SB8 RNU1-124P-201ENST00000363861 145 ntBASIC1.13□□□□□ -2.23
SMC6Q96SB8 Y_RNA.297-201ENST00000364950 91 ntBASIC1.13□□□□□ -2.23
SMC6Q96SB8 RNU6-643P-201ENST00000384018 107 ntBASIC1.13□□□□□ -2.23
SMC6Q96SB8 SNORA79-201ENST00000408376 140 ntBASIC1.13□□□□□ -2.23
SMC6Q96SB8 Y_RNA.644-201ENST00000459006 113 ntBASIC1.13□□□□□ -2.23
SMC6Q96SB8 Y_RNA.674-201ENST00000516362 113 ntBASIC1.13□□□□□ -2.23
SMC6Q96SB8 SNORA18.4-201ENST00000516440 124 ntBASIC1.13□□□□□ -2.23
SMC6Q96SB8 RNU6-1270P-201ENST00000517128 108 ntBASIC1.13□□□□□ -2.23
SMC6Q96SB8 AP003484.1-201ENST00000530974 250 ntBASIC1.13□□□□□ -2.23
SMC6Q96SB8 HSPE1P19-201ENST00000603327 295 ntBASIC1.13□□□□□ -2.23
SMC6Q96SB8 AC072026.1-201ENST00000605023 201 ntBASIC1.13□□□□□ -2.23
SMC6Q96SB8 AC103810.9-201ENST00000606688 112 ntBASIC1.13□□□□□ -2.23
SMC6Q96SB8 U6.106-201ENST00000636360 105 ntBASIC1.13□□□□□ -2.23
SMC6Q96SB8 Y_RNA.182-201ENST00000363880 111 ntBASIC1.12□□□□□ -2.23
SMC6Q96SB8 Y_RNA.233-201ENST00000364407 101 ntBASIC1.12□□□□□ -2.23
SMC6Q96SB8 RNU6-312P-201ENST00000364629 107 ntBASIC1.12□□□□□ -2.23
SMC6Q96SB8 Y_RNA.494-201ENST00000384432 111 ntBASIC1.12□□□□□ -2.23
SMC6Q96SB8 SNORA80D-201ENST00000384488 135 ntBASIC1.12□□□□□ -2.23
SMC6Q96SB8 SNORD77.3-201ENST00000391113 65 ntBASIC1.12□□□□□ -2.23
SMC6Q96SB8 MIR1276-201ENST00000408707 83 ntBASIC1.12□□□□□ -2.23
SMC6Q96SB8 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.12□□□□□ -2.23
SMC6Q96SB8 AL121914.1-201ENST00000450188 156 ntBASIC1.12□□□□□ -2.23
SMC6Q96SB8 RNU7-21P-201ENST00000459430 62 ntBASIC1.12□□□□□ -2.23
SMC6Q96SB8 RNU6-138P-201ENST00000515952 107 ntBASIC1.12□□□□□ -2.23
SMC6Q96SB8 RNA5SP404-201ENST00000517118 132 ntBASIC1.12□□□□□ -2.23
SMC6Q96SB8 MIR4431-201ENST00000579990 94 ntBASIC1.12□□□□□ -2.23
SMC6Q96SB8 MIR378D2-201ENST00000580636 98 ntBASIC1.12□□□□□ -2.23
SMC6Q96SB8 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
SMC6Q96SB8 SNORA1-201ENST00000384107 130 ntBASIC1.11□□□□□ -2.23
SMC6Q96SB8 Y_RNA.440-201ENST00000384120 114 ntBASIC1.11□□□□□ -2.23
SMC6Q96SB8 SNORA51.10-201ENST00000384418 136 ntBASIC1.11□□□□□ -2.23
SMC6Q96SB8 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
SMC6Q96SB8 SNORA75.2-201ENST00000391138 150 ntBASIC1.11□□□□□ -2.23
SMC6Q96SB8 SNORA75.3-201ENST00000391231 150 ntBASIC1.11□□□□□ -2.23
SMC6Q96SB8 AL138752.1-201ENST00000452964 351 ntBASIC1.11□□□□□ -2.23
SMC6Q96SB8 RNU7-120P-201ENST00000459334 63 ntBASIC1.11□□□□□ -2.23
SMC6Q96SB8 SNORD36C-201ENST00000516733 66 ntBASIC1.11□□□□□ -2.23
SMC6Q96SB8 RNA5SP102-201ENST00000516865 106 ntBASIC1.11□□□□□ -2.23
SMC6Q96SB8 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.11□□□□□ -2.23
SMC6Q96SB8 AC243994.1-201ENST00000618627 109 ntBASIC1.11□□□□□ -2.23
SMC6Q96SB8 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
SMC6Q96SB8 Y_RNA.224-201ENST00000364308 111 ntBASIC1.1□□□□□ -2.23
SMC6Q96SB8 Y_RNA.241-201ENST00000364470 117 ntBASIC1.1□□□□□ -2.23
SMC6Q96SB8 RNU6-597P-201ENST00000365620 102 ntBASIC1.1□□□□□ -2.23
SMC6Q96SB8 RNU7-73P-201ENST00000458743 63 ntBASIC1.1□□□□□ -2.23
SMC6Q96SB8 snoU13.16-201ENST00000459350 104 ntBASIC1.1□□□□□ -2.23
SMC6Q96SB8 AC107297.1-201ENST00000459991 176 ntBASIC1.1□□□□□ -2.23
SMC6Q96SB8 SNORD116-25-201ENST00000516517 92 ntBASIC1.1□□□□□ -2.23
SMC6Q96SB8 MIR5197-201ENST00000583721 112 ntBASIC1.1□□□□□ -2.23
SMC6Q96SB8 MIR6504-201ENST00000613520 61 ntBASIC1.1□□□□□ -2.23
SMC6Q96SB8 SEPT14P17-201ENST00000617978 177 ntBASIC1.1□□□□□ -2.23
SMC6Q96SB8 MTND1P7-201ENST00000632801 297 ntBASIC1.1□□□□□ -2.23
SMC6Q96SB8 MIR376A2-201ENST00000636782 80 ntBASIC1.1□□□□□ -2.23
SMC6Q96SB8 AC008163.1-202ENST00000636004 2889 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 218.1 ms