Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 Y_RNA.66-201ENST00000362862 102 ntBASIC0.68□□□□□ -2.3
RAB40CQ96S21 Y_RNA.91-201ENST00000363042 107 ntBASIC0.68□□□□□ -2.3
RAB40CQ96S21 Y_RNA.634-201ENST00000364811 113 ntBASIC0.68□□□□□ -2.3
RAB40CQ96S21 RNU6-484P-201ENST00000384016 107 ntBASIC0.68□□□□□ -2.3
RAB40CQ96S21 Y_RNA.518-201ENST00000384552 113 ntBASIC0.68□□□□□ -2.3
RAB40CQ96S21 MIR146A-201ENST00000385201 99 ntBASIC0.68□□□□□ -2.3
RAB40CQ96S21 MIR616-201ENST00000385293 97 ntBASIC0.68□□□□□ -2.3
RAB40CQ96S21 AL606845.1-201ENST00000404881 255 ntBASIC0.68□□□□□ -2.3
RAB40CQ96S21 MIR1827-201ENST00000408549 66 ntBASIC0.68□□□□□ -2.3
RAB40CQ96S21 AC113410.1-201ENST00000505029 247 ntBASIC0.68□□□□□ -2.3
RAB40CQ96S21 SNORD36C-201ENST00000516733 66 ntBASIC0.68□□□□□ -2.3
RAB40CQ96S21 AL117187.1-201ENST00000555482 181 ntBASIC0.68□□□□□ -2.3
RAB40CQ96S21 MIR4264-201ENST00000583520 66 ntBASIC0.68□□□□□ -2.3
RAB40CQ96S21 MIR6857-201ENST00000613267 93 ntBASIC0.68□□□□□ -2.3
RAB40CQ96S21 AL365265.1-201ENST00000621045 234 ntBASIC0.68□□□□□ -2.3
RAB40CQ96S21 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
RAB40CQ96S21 MIR1-1-201ENST00000362147 71 ntBASIC0.67□□□□□ -2.3
RAB40CQ96S21 Y_RNA.122-201ENST00000363331 96 ntBASIC0.67□□□□□ -2.3
RAB40CQ96S21 SNORD114-27-201ENST00000363766 70 ntBASIC0.67□□□□□ -2.3
RAB40CQ96S21 SNORD45.3-201ENST00000363836 72 ntBASIC0.67□□□□□ -2.3
RAB40CQ96S21 Y_RNA.199-201ENST00000364014 102 ntBASIC0.67□□□□□ -2.3
RAB40CQ96S21 snoU2_19.4-201ENST00000364329 80 ntBASIC0.67□□□□□ -2.3
RAB40CQ96S21 Y_RNA.304-201ENST00000365011 112 ntBASIC0.67□□□□□ -2.3
RAB40CQ96S21 Y_RNA.396-201ENST00000383949 103 ntBASIC0.67□□□□□ -2.3
RAB40CQ96S21 MIR532-201ENST00000385025 91 ntBASIC0.67□□□□□ -2.3
RAB40CQ96S21 SNORD99-201ENST00000408612 74 ntBASIC0.67□□□□□ -2.3
RAB40CQ96S21 AC090844.1-201ENST00000422019 156 ntBASIC0.67□□□□□ -2.3
RAB40CQ96S21 RNU7-73P-201ENST00000458743 63 ntBASIC0.67□□□□□ -2.3
RAB40CQ96S21 RPS29P24-201ENST00000486345 171 ntBASIC0.67□□□□□ -2.3
RAB40CQ96S21 RNA5SP220-201ENST00000516298 104 ntBASIC0.67□□□□□ -2.3
RAB40CQ96S21 RNA5SP153-201ENST00000516498 76 ntBASIC0.67□□□□□ -2.3
RAB40CQ96S21 RNU7-53P-201ENST00000516705 60 ntBASIC0.67□□□□□ -2.3
RAB40CQ96S21 RNU6-453P-201ENST00000516819 85 ntBASIC0.67□□□□□ -2.3
RAB40CQ96S21 MIR4282-201ENST00000583613 67 ntBASIC0.67□□□□□ -2.3
RAB40CQ96S21 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
RAB40CQ96S21 AC023934.1-201ENST00000574529 2389 ntBASIC0.66□□□□□ -2.3
RAB40CQ96S21 Y_RNA.54-201ENST00000362766 105 ntBASIC0.66□□□□□ -2.3
RAB40CQ96S21 Y_RNA.269-201ENST00000364685 89 ntBASIC0.66□□□□□ -2.3
RAB40CQ96S21 RNU6-580P-201ENST00000365159 107 ntBASIC0.66□□□□□ -2.3
RAB40CQ96S21 Y_RNA.352-201ENST00000365439 102 ntBASIC0.66□□□□□ -2.3
RAB40CQ96S21 Y_RNA.459-201ENST00000384251 102 ntBASIC0.66□□□□□ -2.3
RAB40CQ96S21 RNU6-738P-201ENST00000384531 106 ntBASIC0.66□□□□□ -2.3
RAB40CQ96S21 MIR518E-201ENST00000385252 88 ntBASIC0.66□□□□□ -2.3
RAB40CQ96S21 RNU6-1228P-201ENST00000391014 107 ntBASIC0.66□□□□□ -2.3
RAB40CQ96S21 AL606490.4-201ENST00000423117 127 ntBASIC0.66□□□□□ -2.3
RAB40CQ96S21 AF228730.3-201ENST00000436691 102 ntBASIC0.66□□□□□ -2.3
RAB40CQ96S21 FAM71BP1-201ENST00000604431 523 ntBASIC0.66□□□□□ -2.3
RAB40CQ96S21 Y_RNA.47-201ENST00000362697 108 ntBASIC0.65□□□□□ -2.31
RAB40CQ96S21 Y_RNA.149-201ENST00000363558 117 ntBASIC0.65□□□□□ -2.31
RAB40CQ96S21 RNU4-17P-201ENST00000365598 141 ntBASIC0.65□□□□□ -2.31
RAB40CQ96S21 Y_RNA.416-201ENST00000384014 113 ntBASIC0.65□□□□□ -2.31
RAB40CQ96S21 RNU6-913P-201ENST00000390913 95 ntBASIC0.65□□□□□ -2.31
RAB40CQ96S21 RPS26P5-201ENST00000418544 335 ntBASIC0.65□□□□□ -2.31
RAB40CQ96S21 SNRPGP8-201ENST00000454064 226 ntBASIC0.65□□□□□ -2.31
RAB40CQ96S21 AC097639.2-201ENST00000603159 172 ntBASIC0.65□□□□□ -2.31
RAB40CQ96S21 Y_RNA.116-201ENST00000363292 103 ntBASIC0.64□□□□□ -2.31
RAB40CQ96S21 RNU6-694P-201ENST00000364071 147 ntBASIC0.64□□□□□ -2.31
RAB40CQ96S21 RNU6-42P-201ENST00000384165 107 ntBASIC0.64□□□□□ -2.31
RAB40CQ96S21 SNORD105-201ENST00000386910 85 ntBASIC0.64□□□□□ -2.31
RAB40CQ96S21 RNU6-381P-201ENST00000391259 108 ntBASIC0.64□□□□□ -2.31
RAB40CQ96S21 snoU13.21-201ENST00000459368 105 ntBASIC0.64□□□□□ -2.31
RAB40CQ96S21 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.64□□□□□ -2.31
RAB40CQ96S21 MIR6734-201ENST00000621166 68 ntBASIC0.64□□□□□ -2.31
RAB40CQ96S21 MIR6866-201ENST00000638146 69 ntBASIC0.64□□□□□ -2.31
RAB40CQ96S21 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
RAB40CQ96S21 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
RAB40CQ96S21 RNU6-653P-201ENST00000363074 106 ntBASIC0.63□□□□□ -2.31
RAB40CQ96S21 Y_RNA.262-201ENST00000364641 102 ntBASIC0.63□□□□□ -2.31
RAB40CQ96S21 Y_RNA.277-201ENST00000364754 102 ntBASIC0.63□□□□□ -2.31
RAB40CQ96S21 SNORD114-22-201ENST00000365423 72 ntBASIC0.63□□□□□ -2.31
RAB40CQ96S21 RNU6-1189P-201ENST00000383958 107 ntBASIC0.63□□□□□ -2.31
RAB40CQ96S21 Y_RNA.410-201ENST00000383992 113 ntBASIC0.63□□□□□ -2.31
RAB40CQ96S21 SNORD38B-201ENST00000384690 67 ntBASIC0.63□□□□□ -2.31
RAB40CQ96S21 SNORD83.1-201ENST00000411362 77 ntBASIC0.63□□□□□ -2.31
RAB40CQ96S21 AC244023.1-201ENST00000426884 112 ntBASIC0.63□□□□□ -2.31
RAB40CQ96S21 AL138752.1-201ENST00000452964 351 ntBASIC0.63□□□□□ -2.31
RAB40CQ96S21 RNU7-62P-201ENST00000458856 62 ntBASIC0.63□□□□□ -2.31
RAB40CQ96S21 RNU7-96P-201ENST00000459535 64 ntBASIC0.63□□□□□ -2.31
RAB40CQ96S21 COX6CP6-201ENST00000490840 228 ntBASIC0.63□□□□□ -2.31
RAB40CQ96S21 MIR4643-201ENST00000577473 78 ntBASIC0.63□□□□□ -2.31
RAB40CQ96S21 MIR4698-201ENST00000577795 80 ntBASIC0.63□□□□□ -2.31
RAB40CQ96S21 AC242498.1-201ENST00000604134 111 ntBASIC0.63□□□□□ -2.31
RAB40CQ96S21 AL442067.1-201ENST00000613261 223 ntBASIC0.63□□□□□ -2.31
RAB40CQ96S21 SNORD38B-202ENST00000625943 69 ntBASIC0.63□□□□□ -2.31
RAB40CQ96S21 RNU6-1309P-201ENST00000363305 108 ntBASIC0.62□□□□□ -2.31
RAB40CQ96S21 SNORA1.1-201ENST00000364671 133 ntBASIC0.62□□□□□ -2.31
RAB40CQ96S21 RNU6-934P-201ENST00000365154 107 ntBASIC0.62□□□□□ -2.31
RAB40CQ96S21 RNU6-728P-201ENST00000365375 104 ntBASIC0.62□□□□□ -2.31
RAB40CQ96S21 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
RAB40CQ96S21 RNU2-38P-201ENST00000410856 79 ntBASIC0.62□□□□□ -2.31
RAB40CQ96S21 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.62□□□□□ -2.31
RAB40CQ96S21 HMGN1P33-201ENST00000432945 451 ntBASIC0.62□□□□□ -2.31
RAB40CQ96S21 RNU2-11P-201ENST00000459191 187 ntBASIC0.62□□□□□ -2.31
RAB40CQ96S21 RNU6-998P-201ENST00000515894 101 ntBASIC0.62□□□□□ -2.31
RAB40CQ96S21 AC011195.1-201ENST00000578177 177 ntBASIC0.62□□□□□ -2.31
RAB40CQ96S21 MIR3973-201ENST00000579824 107 ntBASIC0.62□□□□□ -2.31
RAB40CQ96S21 AL360085.1-201ENST00000604713 532 ntBASIC0.62□□□□□ -2.31
RAB40CQ96S21 MIR8055-201ENST00000610739 97 ntBASIC0.62□□□□□ -2.31
RAB40CQ96S21 Z97988.1-201ENST00000637697 135 ntBASIC0.62□□□□□ -2.31
RAB40CQ96S21 MIR96-201ENST00000362288 78 ntBASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 334.5 ms