Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 RNU6-1336P-201ENST00000383886 109 ntBASIC-1.12□□□□□ -2.59
AP1S3Q96PC3 Y_RNA.430-201ENST00000384081 110 ntBASIC-1.12□□□□□ -2.59
AP1S3Q96PC3 AL365203.2-201ENST00000423444 196 ntBASIC-1.12□□□□□ -2.59
AP1S3Q96PC3 AP001328.1-201ENST00000528550 176 ntBASIC-1.12□□□□□ -2.59
AP1S3Q96PC3 MTND3P12-201ENST00000559068 328 ntBASIC-1.12□□□□□ -2.59
AP1S3Q96PC3 RNU6-86P-201ENST00000606534 107 ntBASIC-1.12□□□□□ -2.59
AP1S3Q96PC3 AL021707.8-201ENST00000609428 183 ntBASIC-1.12□□□□□ -2.59
AP1S3Q96PC3 RNU6-801P-201ENST00000364087 105 ntBASIC-1.13□□□□□ -2.59
AP1S3Q96PC3 RNU6-1138P-201ENST00000365359 106 ntBASIC-1.13□□□□□ -2.59
AP1S3Q96PC3 MIR539-201ENST00000365690 78 ntBASIC-1.13□□□□□ -2.59
AP1S3Q96PC3 RNU6-1201P-201ENST00000384227 107 ntBASIC-1.13□□□□□ -2.59
AP1S3Q96PC3 SNORA18-201ENST00000384416 132 ntBASIC-1.13□□□□□ -2.59
AP1S3Q96PC3 RNU6-831P-201ENST00000384548 107 ntBASIC-1.13□□□□□ -2.59
AP1S3Q96PC3 RNU6-332P-201ENST00000391193 108 ntBASIC-1.13□□□□□ -2.59
AP1S3Q96PC3 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC-1.13□□□□□ -2.59
AP1S3Q96PC3 SNORD38.3-201ENST00000516599 73 ntBASIC-1.13□□□□□ -2.59
AP1S3Q96PC3 SCARNA1-201ENST00000517138 166 ntBASIC-1.13□□□□□ -2.59
AP1S3Q96PC3 MIR3145-201ENST00000580727 82 ntBASIC-1.13□□□□□ -2.59
AP1S3Q96PC3 AL049861.1-201ENST00000603130 150 ntBASIC-1.13□□□□□ -2.59
AP1S3Q96PC3 AC092794.2-201ENST00000620933 563 ntBASIC-1.13□□□□□ -2.59
AP1S3Q96PC3 Y_RNA.251-201ENST00000364551 99 ntBASIC-1.14□□□□□ -2.59
AP1S3Q96PC3 MIR204-201ENST00000385200 110 ntBASIC-1.14□□□□□ -2.59
AP1S3Q96PC3 RNU6-584P-201ENST00000410350 95 ntBASIC-1.14□□□□□ -2.59
AP1S3Q96PC3 MTND4P28-201ENST00000426217 387 ntBASIC-1.14□□□□□ -2.59
AP1S3Q96PC3 AC074198.2-201ENST00000508153 258 ntBASIC-1.14□□□□□ -2.59
AP1S3Q96PC3 RNU6-758P-201ENST00000516292 89 ntBASIC-1.14□□□□□ -2.59
AP1S3Q96PC3 RNU6-881P-201ENST00000516813 102 ntBASIC-1.14□□□□□ -2.59
AP1S3Q96PC3 RNU6-1270P-201ENST00000517128 108 ntBASIC-1.14□□□□□ -2.59
AP1S3Q96PC3 RNU1-54P-201ENST00000517181 120 ntBASIC-1.14□□□□□ -2.59
AP1S3Q96PC3 MIR3920-201ENST00000581751 86 ntBASIC-1.14□□□□□ -2.59
AP1S3Q96PC3 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-1.14□□□□□ -2.59
AP1S3Q96PC3 MIR548AE1-201ENST00000583292 70 ntBASIC-1.14□□□□□ -2.59
AP1S3Q96PC3 AC087588.2-201ENST00000617667 426 ntBASIC-1.14□□□□□ -2.59
AP1S3Q96PC3 U6.109-201ENST00000636749 87 ntBASIC-1.14□□□□□ -2.59
AP1S3Q96PC3 RNU1-141P-201ENST00000364623 158 ntBASIC-1.15□□□□□ -2.59
AP1S3Q96PC3 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.15□□□□□ -2.59
AP1S3Q96PC3 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-1.15□□□□□ -2.59
AP1S3Q96PC3 MTND2P22-201ENST00000444325 1033 ntBASIC-1.15□□□□□ -2.59
AP1S3Q96PC3 Y_RNA.648-201ENST00000459455 110 ntBASIC-1.15□□□□□ -2.59
AP1S3Q96PC3 MIR2355-201ENST00000517199 87 ntBASIC-1.15□□□□□ -2.59
AP1S3Q96PC3 AC108676.2-201ENST00000605225 163 ntBASIC-1.15□□□□□ -2.59
AP1S3Q96PC3 MIR376A2-201ENST00000636782 80 ntBASIC-1.15□□□□□ -2.59
AP1S3Q96PC3 MIR6841-201ENST00000637129 72 ntBASIC-1.15□□□□□ -2.59
AP1S3Q96PC3 RNY1P2-201ENST00000364820 117 ntBASIC-1.16□□□□□ -2.6
AP1S3Q96PC3 Y_RNA.366-201ENST00000365540 102 ntBASIC-1.16□□□□□ -2.6
AP1S3Q96PC3 Y_RNA.481-201ENST00000384373 102 ntBASIC-1.16□□□□□ -2.6
AP1S3Q96PC3 AL603914.1-201ENST00000401964 204 ntBASIC-1.16□□□□□ -2.6
AP1S3Q96PC3 RNU6-383P-201ENST00000410864 94 ntBASIC-1.16□□□□□ -2.6
AP1S3Q96PC3 AC074085.1-201ENST00000413598 418 ntBASIC-1.16□□□□□ -2.6
AP1S3Q96PC3 MTND1P2-201ENST00000430604 821 ntBASIC-1.16□□□□□ -2.6
AP1S3Q96PC3 AL160004.2-201ENST00000432935 350 ntBASIC-1.16□□□□□ -2.6
AP1S3Q96PC3 SCARNA17-201ENST00000516183 144 ntBASIC-1.16□□□□□ -2.6
AP1S3Q96PC3 RN7SKP295-201ENST00000517264 153 ntBASIC-1.16□□□□□ -2.6
AP1S3Q96PC3 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.16□□□□□ -2.6
AP1S3Q96PC3 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-1.16□□□□□ -2.6
AP1S3Q96PC3 MIR7111-201ENST00000619751 72 ntBASIC-1.16□□□□□ -2.6
AP1S3Q96PC3 uc_338.10-201ENST00000621872 182 ntBASIC-1.16□□□□□ -2.6
AP1S3Q96PC3 MIR302B-201ENST00000362188 73 ntBASIC-1.17□□□□□ -2.6
AP1S3Q96PC3 Y_RNA.2-201ENST00000362330 96 ntBASIC-1.17□□□□□ -2.6
AP1S3Q96PC3 SNORA72.4-201ENST00000384174 132 ntBASIC-1.17□□□□□ -2.6
AP1S3Q96PC3 Y_RNA.570-201ENST00000384750 101 ntBASIC-1.17□□□□□ -2.6
AP1S3Q96PC3 RNU6-780P-201ENST00000391030 104 ntBASIC-1.17□□□□□ -2.6
AP1S3Q96PC3 RNU6-721P-201ENST00000410155 105 ntBASIC-1.17□□□□□ -2.6
AP1S3Q96PC3 RNU6-908P-201ENST00000410160 94 ntBASIC-1.17□□□□□ -2.6
AP1S3Q96PC3 Z95118.1-201ENST00000421372 247 ntBASIC-1.17□□□□□ -2.6
AP1S3Q96PC3 AC021146.6-201ENST00000514659 117 ntBASIC-1.17□□□□□ -2.6
AP1S3Q96PC3 RNU6-864P-201ENST00000516256 108 ntBASIC-1.17□□□□□ -2.6
AP1S3Q96PC3 Y_RNA.757-201ENST00000578934 114 ntBASIC-1.17□□□□□ -2.6
AP1S3Q96PC3 RNU6-888P-201ENST00000363010 101 ntBASIC-1.18□□□□□ -2.6
AP1S3Q96PC3 RNU6-1085P-201ENST00000363576 107 ntBASIC-1.18□□□□□ -2.6
AP1S3Q96PC3 Y_RNA.230-201ENST00000364348 109 ntBASIC-1.18□□□□□ -2.6
AP1S3Q96PC3 Y_RNA.246-201ENST00000364495 108 ntBASIC-1.18□□□□□ -2.6
AP1S3Q96PC3 SNORD24-201ENST00000383884 75 ntBASIC-1.18□□□□□ -2.6
AP1S3Q96PC3 RNU6-1036P-201ENST00000383959 104 ntBASIC-1.18□□□□□ -2.6
AP1S3Q96PC3 SNORD83B-201ENST00000386745 93 ntBASIC-1.18□□□□□ -2.6
AP1S3Q96PC3 Y_RNA.594-201ENST00000410373 140 ntBASIC-1.18□□□□□ -2.6
AP1S3Q96PC3 RNU6-1148P-201ENST00000410992 104 ntBASIC-1.18□□□□□ -2.6
AP1S3Q96PC3 MIR2053-201ENST00000459295 91 ntBASIC-1.18□□□□□ -2.6
AP1S3Q96PC3 RNU6-566P-201ENST00000516790 107 ntBASIC-1.18□□□□□ -2.6
AP1S3Q96PC3 MIR4659A-201ENST00000580269 81 ntBASIC-1.18□□□□□ -2.6
AP1S3Q96PC3 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC-1.18□□□□□ -2.6
AP1S3Q96PC3 AC073114.1-201ENST00000612027 490 ntBASIC-1.18□□□□□ -2.6
AP1S3Q96PC3 DISC2.1-201ENST00000612827 205 ntBASIC-1.18□□□□□ -2.6
AP1S3Q96PC3 MIR6851-201ENST00000617060 67 ntBASIC-1.18□□□□□ -2.6
AP1S3Q96PC3 RNU4-80P-201ENST00000363200 141 ntBASIC-1.19□□□□□ -2.6
AP1S3Q96PC3 Y_RNA.119-201ENST00000363301 96 ntBASIC-1.19□□□□□ -2.6
AP1S3Q96PC3 SNORD114-25-201ENST00000363742 72 ntBASIC-1.19□□□□□ -2.6
AP1S3Q96PC3 Y_RNA.323-201ENST00000365157 109 ntBASIC-1.19□□□□□ -2.6
AP1S3Q96PC3 Y_RNA.351-201ENST00000365436 96 ntBASIC-1.19□□□□□ -2.6
AP1S3Q96PC3 RNU6-449P-201ENST00000383914 107 ntBASIC-1.19□□□□□ -2.6
AP1S3Q96PC3 MIR7-2-201ENST00000384970 110 ntBASIC-1.19□□□□□ -2.6
AP1S3Q96PC3 RNU6-308P-201ENST00000390957 107 ntBASIC-1.19□□□□□ -2.6
AP1S3Q96PC3 Y_RNA.592-201ENST00000410274 109 ntBASIC-1.19□□□□□ -2.6
AP1S3Q96PC3 RNA5SP261-201ENST00000410536 106 ntBASIC-1.19□□□□□ -2.6
AP1S3Q96PC3 RNU6-1086P-201ENST00000410930 100 ntBASIC-1.19□□□□□ -2.6
AP1S3Q96PC3 RNU5E-9P-201ENST00000411164 104 ntBASIC-1.19□□□□□ -2.6
AP1S3Q96PC3 TRAJ51-201ENST00000504127 63 ntBASIC-1.19□□□□□ -2.6
AP1S3Q96PC3 RNU6-138P-201ENST00000515952 107 ntBASIC-1.19□□□□□ -2.6
AP1S3Q96PC3 RNU7-79P-201ENST00000516082 62 ntBASIC-1.19□□□□□ -2.6
AP1S3Q96PC3 SNORD77.4-201ENST00000516158 81 ntBASIC-1.19□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms