Protein–RNA interactions for Protein: Q96NT0

CCDC115, Coiled-coil domain-containing protein 115, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC115Q96NT0 AL590004.1-201ENST00000405321 300 ntBASIC-1.52□□□□□ -2.65
CCDC115Q96NT0 SNORA36B-201ENST00000410438 131 ntBASIC-1.52□□□□□ -2.65
CCDC115Q96NT0 AF228730.4-201ENST00000421457 183 ntBASIC-1.52□□□□□ -2.65
CCDC115Q96NT0 AC023449.1-201ENST00000454464 154 ntBASIC-1.52□□□□□ -2.65
CCDC115Q96NT0 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC-1.52□□□□□ -2.65
CCDC115Q96NT0 RNU6-232P-201ENST00000517144 64 ntBASIC-1.52□□□□□ -2.65
CCDC115Q96NT0 AC060788.1-201ENST00000521318 469 ntBASIC-1.52□□□□□ -2.65
CCDC115Q96NT0 MIR3672-201ENST00000584290 82 ntBASIC-1.52□□□□□ -2.65
CCDC115Q96NT0 AC087752.4-201ENST00000605911 462 ntBASIC-1.52□□□□□ -2.65
CCDC115Q96NT0 SNORD116-11-201ENST00000383882 92 ntBASIC-1.53□□□□□ -2.65
CCDC115Q96NT0 Y_RNA.430-201ENST00000384081 110 ntBASIC-1.53□□□□□ -2.65
CCDC115Q96NT0 RNU6-842P-201ENST00000384269 107 ntBASIC-1.53□□□□□ -2.65
CCDC115Q96NT0 RNU6-901P-201ENST00000384593 106 ntBASIC-1.53□□□□□ -2.65
CCDC115Q96NT0 Y_RNA.587-201ENST00000391210 103 ntBASIC-1.53□□□□□ -2.65
CCDC115Q96NT0 RNU6-648P-201ENST00000410190 107 ntBASIC-1.53□□□□□ -2.65
CCDC115Q96NT0 RNU7-45P-201ENST00000459460 63 ntBASIC-1.53□□□□□ -2.65
CCDC115Q96NT0 RNU7-149P-201ENST00000516739 59 ntBASIC-1.53□□□□□ -2.65
CCDC115Q96NT0 MIR2355-201ENST00000517199 87 ntBASIC-1.53□□□□□ -2.65
CCDC115Q96NT0 AC022441.3-201ENST00000605737 136 ntBASIC-1.53□□□□□ -2.65
CCDC115Q96NT0 AC024933.1-201ENST00000608472 348 ntBASIC-1.53□□□□□ -2.65
CCDC115Q96NT0 AC027449.1-201ENST00000608890 407 ntBASIC-1.53□□□□□ -2.65
CCDC115Q96NT0 AC022960.3-201ENST00000619794 441 ntBASIC-1.53□□□□□ -2.65
CCDC115Q96NT0 AC079248.2-201ENST00000623779 326 ntBASIC-1.53□□□□□ -2.65
CCDC115Q96NT0 MIR302B-201ENST00000362188 73 ntBASIC-1.54□□□□□ -2.66
CCDC115Q96NT0 RNU4-32P-201ENST00000363404 141 ntBASIC-1.54□□□□□ -2.66
CCDC115Q96NT0 AC098826.2-201ENST00000452011 651 ntBASIC-1.54□□□□□ -2.66
CCDC115Q96NT0 RNU7-125P-201ENST00000458760 62 ntBASIC-1.54□□□□□ -2.66
CCDC115Q96NT0 RNU6-1129P-201ENST00000515964 104 ntBASIC-1.54□□□□□ -2.66
CCDC115Q96NT0 RNU2-31P-201ENST00000516954 155 ntBASIC-1.54□□□□□ -2.66
CCDC115Q96NT0 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.54□□□□□ -2.66
CCDC115Q96NT0 MIR3165-201ENST00000579874 75 ntBASIC-1.54□□□□□ -2.66
CCDC115Q96NT0 MIR4473-201ENST00000583731 91 ntBASIC-1.54□□□□□ -2.66
CCDC115Q96NT0 AC040904.1-201ENST00000590850 223 ntBASIC-1.54□□□□□ -2.66
CCDC115Q96NT0 AC005014.2-201ENST00000607795 599 ntBASIC-1.54□□□□□ -2.66
CCDC115Q96NT0 Y_RNA.72-201ENST00000362894 103 ntBASIC-1.55□□□□□ -2.66
CCDC115Q96NT0 RNA5SP192-201ENST00000364404 120 ntBASIC-1.55□□□□□ -2.66
CCDC115Q96NT0 RNY1P13-201ENST00000365030 105 ntBASIC-1.55□□□□□ -2.66
CCDC115Q96NT0 Y_RNA.436-201ENST00000384097 102 ntBASIC-1.55□□□□□ -2.66
CCDC115Q96NT0 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC-1.55□□□□□ -2.66
CCDC115Q96NT0 Y_RNA.665-201ENST00000516177 98 ntBASIC-1.55□□□□□ -2.66
CCDC115Q96NT0 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-1.55□□□□□ -2.66
CCDC115Q96NT0 MIR4280-201ENST00000582178 76 ntBASIC-1.55□□□□□ -2.66
CCDC115Q96NT0 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-1.55□□□□□ -2.66
CCDC115Q96NT0 MIR342-201ENST00000362212 99 ntBASIC-1.56□□□□□ -2.66
CCDC115Q96NT0 RNU6-502P-201ENST00000362419 108 ntBASIC-1.56□□□□□ -2.66
CCDC115Q96NT0 RNU6-20P-201ENST00000384106 107 ntBASIC-1.56□□□□□ -2.66
CCDC115Q96NT0 Y_RNA.439-201ENST00000384119 94 ntBASIC-1.56□□□□□ -2.66
CCDC115Q96NT0 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.56□□□□□ -2.66
CCDC115Q96NT0 RNU6-900P-201ENST00000384498 102 ntBASIC-1.56□□□□□ -2.66
CCDC115Q96NT0 MT-TH-201ENST00000387441 69 ntBASIC-1.56□□□□□ -2.66
CCDC115Q96NT0 RNU6-274P-201ENST00000459566 107 ntBASIC-1.56□□□□□ -2.66
CCDC115Q96NT0 RNU6-1170P-201ENST00000515974 106 ntBASIC-1.56□□□□□ -2.66
CCDC115Q96NT0 RNU6-693P-201ENST00000516134 107 ntBASIC-1.56□□□□□ -2.66
CCDC115Q96NT0 RNU6-759P-201ENST00000516740 103 ntBASIC-1.56□□□□□ -2.66
CCDC115Q96NT0 RNU6-175P-201ENST00000516896 107 ntBASIC-1.56□□□□□ -2.66
CCDC115Q96NT0 RNU6-835P-201ENST00000516974 104 ntBASIC-1.56□□□□□ -2.66
CCDC115Q96NT0 MIR6851-201ENST00000617060 67 ntBASIC-1.56□□□□□ -2.66
CCDC115Q96NT0 MIR4320-201ENST00000636981 65 ntBASIC-1.56□□□□□ -2.66
CCDC115Q96NT0 RNU6-626P-201ENST00000363354 107 ntBASIC-1.57□□□□□ -2.66
CCDC115Q96NT0 RNA5SP133-201ENST00000363368 119 ntBASIC-1.57□□□□□ -2.66
CCDC115Q96NT0 Y_RNA.221-201ENST00000364248 96 ntBASIC-1.57□□□□□ -2.66
CCDC115Q96NT0 RNU4-16P-201ENST00000364737 141 ntBASIC-1.57□□□□□ -2.66
CCDC115Q96NT0 Y_RNA.530-201ENST00000384587 101 ntBASIC-1.57□□□□□ -2.66
CCDC115Q96NT0 SNORD56B-201ENST00000384713 71 ntBASIC-1.57□□□□□ -2.66
CCDC115Q96NT0 MIR620-201ENST00000385232 95 ntBASIC-1.57□□□□□ -2.66
CCDC115Q96NT0 AL603914.1-201ENST00000401964 204 ntBASIC-1.57□□□□□ -2.66
CCDC115Q96NT0 RNU5E-9P-201ENST00000411164 104 ntBASIC-1.57□□□□□ -2.66
CCDC115Q96NT0 AC074085.1-201ENST00000413598 418 ntBASIC-1.57□□□□□ -2.66
CCDC115Q96NT0 RNU7-74P-201ENST00000459104 62 ntBASIC-1.57□□□□□ -2.66
CCDC115Q96NT0 AC091951.2-201ENST00000500762 203 ntBASIC-1.57□□□□□ -2.66
CCDC115Q96NT0 RNA5SP470-201ENST00000516463 106 ntBASIC-1.57□□□□□ -2.66
CCDC115Q96NT0 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC-1.57□□□□□ -2.66
CCDC115Q96NT0 MIR378F-201ENST00000578143 78 ntBASIC-1.57□□□□□ -2.66
CCDC115Q96NT0 DISC2.1-201ENST00000612827 205 ntBASIC-1.57□□□□□ -2.66
CCDC115Q96NT0 RNU6-1138P-201ENST00000365359 106 ntBASIC-1.58□□□□□ -2.66
CCDC115Q96NT0 MTND2P22-201ENST00000444325 1033 ntBASIC-1.58□□□□□ -2.66
CCDC115Q96NT0 RNU7-66P-201ENST00000459469 62 ntBASIC-1.58□□□□□ -2.66
CCDC115Q96NT0 SNORD38.3-201ENST00000516599 73 ntBASIC-1.58□□□□□ -2.66
CCDC115Q96NT0 MIR3915-201ENST00000578518 97 ntBASIC-1.58□□□□□ -2.66
CCDC115Q96NT0 MIR548H5-201ENST00000580314 60 ntBASIC-1.58□□□□□ -2.66
CCDC115Q96NT0 RNU1-141P-201ENST00000364623 158 ntBASIC-1.59□□□□□ -2.66
CCDC115Q96NT0 MIR539-201ENST00000365690 78 ntBASIC-1.59□□□□□ -2.66
CCDC115Q96NT0 AC024067.1-201ENST00000426199 223 ntBASIC-1.59□□□□□ -2.66
CCDC115Q96NT0 MTND1P14-201ENST00000427400 950 ntBASIC-1.59□□□□□ -2.66
CCDC115Q96NT0 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.59□□□□□ -2.66
CCDC115Q96NT0 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-1.59□□□□□ -2.66
CCDC115Q96NT0 AC107308.1-201ENST00000615897 301 ntBASIC-1.59□□□□□ -2.66
CCDC115Q96NT0 RNA5SP331-201ENST00000364986 107 ntBASIC-1.6□□□□□ -2.67
CCDC115Q96NT0 MIR548A2-201ENST00000384956 97 ntBASIC-1.6□□□□□ -2.67
CCDC115Q96NT0 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-1.6□□□□□ -2.67
CCDC115Q96NT0 SNORD115-47-201ENST00000391226 86 ntBASIC-1.6□□□□□ -2.67
CCDC115Q96NT0 Y_RNA.615-201ENST00000410769 117 ntBASIC-1.6□□□□□ -2.67
CCDC115Q96NT0 SNORD5.1-201ENST00000458800 75 ntBASIC-1.6□□□□□ -2.67
CCDC115Q96NT0 Y_RNA.648-201ENST00000459455 110 ntBASIC-1.6□□□□□ -2.67
CCDC115Q96NT0 SNORD11.1-201ENST00000459482 85 ntBASIC-1.6□□□□□ -2.67
CCDC115Q96NT0 RN7SKP19-201ENST00000516016 252 ntBASIC-1.6□□□□□ -2.67
CCDC115Q96NT0 RNU1-54P-201ENST00000517181 120 ntBASIC-1.6□□□□□ -2.67
CCDC115Q96NT0 MTATP6P24-201ENST00000576835 677 ntBASIC-1.6□□□□□ -2.67
CCDC115Q96NT0 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC-1.6□□□□□ -2.67
CCDC115Q96NT0 RNU6-86P-201ENST00000606534 107 ntBASIC-1.6□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 192.6 ms