Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 MIR9-2-201ENST00000384838 87 ntBASIC3.29□□□□□ -1.88
TRIM47Q96LD4 RNU6-587P-201ENST00000391282 106 ntBASIC3.29□□□□□ -1.88
TRIM47Q96LD4 AC234781.5-201ENST00000508429 271 ntBASIC3.29□□□□□ -1.88
TRIM47Q96LD4 RNU7-53P-201ENST00000516705 60 ntBASIC3.29□□□□□ -1.88
TRIM47Q96LD4 DNAJC19P9-201ENST00000555084 351 ntBASIC3.29□□□□□ -1.88
TRIM47Q96LD4 MIR664A-201ENST00000626086 82 ntBASIC3.29□□□□□ -1.88
TRIM47Q96LD4 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
TRIM47Q96LD4 SNORA70.7-201ENST00000384159 133 ntBASIC3.28□□□□□ -1.88
TRIM47Q96LD4 SNORD38.2-201ENST00000384470 69 ntBASIC3.28□□□□□ -1.88
TRIM47Q96LD4 SNORA67.4-201ENST00000384688 142 ntBASIC3.28□□□□□ -1.88
TRIM47Q96LD4 AC009969.1-201ENST00000438726 172 ntBASIC3.28□□□□□ -1.88
TRIM47Q96LD4 AL163195.1-201ENST00000496941 348 ntBASIC3.28□□□□□ -1.88
TRIM47Q96LD4 Y_RNA.660-201ENST00000516002 120 ntBASIC3.28□□□□□ -1.88
TRIM47Q96LD4 RNA5SP24-201ENST00000516478 95 ntBASIC3.28□□□□□ -1.88
TRIM47Q96LD4 RNU6-807P-201ENST00000516805 107 ntBASIC3.28□□□□□ -1.88
TRIM47Q96LD4 RNU6-958P-201ENST00000516995 106 ntBASIC3.28□□□□□ -1.88
TRIM47Q96LD4 RNU6-1116P-201ENST00000517269 99 ntBASIC3.28□□□□□ -1.88
TRIM47Q96LD4 MTND5P40-201ENST00000559945 246 ntBASIC3.28□□□□□ -1.88
TRIM47Q96LD4 MIR4796-201ENST00000580742 81 ntBASIC3.28□□□□□ -1.88
TRIM47Q96LD4 MIR4791-201ENST00000607666 84 ntBASIC3.28□□□□□ -1.88
TRIM47Q96LD4 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
TRIM47Q96LD4 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.27□□□□□ -1.89
TRIM47Q96LD4 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
TRIM47Q96LD4 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
TRIM47Q96LD4 RNA5SP133-201ENST00000363368 119 ntBASIC3.27□□□□□ -1.89
TRIM47Q96LD4 RNA5SP139-201ENST00000364340 117 ntBASIC3.27□□□□□ -1.89
TRIM47Q96LD4 RNU1-112P-201ENST00000364401 164 ntBASIC3.27□□□□□ -1.89
TRIM47Q96LD4 SNORA25.9-201ENST00000365087 128 ntBASIC3.27□□□□□ -1.89
TRIM47Q96LD4 RNU6-163P-201ENST00000384396 106 ntBASIC3.27□□□□□ -1.89
TRIM47Q96LD4 Y_RNA.508-201ENST00000384502 114 ntBASIC3.27□□□□□ -1.89
TRIM47Q96LD4 RNU6-342P-201ENST00000384521 104 ntBASIC3.27□□□□□ -1.89
TRIM47Q96LD4 MIR635-201ENST00000384830 98 ntBASIC3.27□□□□□ -1.89
TRIM47Q96LD4 MIR9-1-201ENST00000385198 89 ntBASIC3.27□□□□□ -1.89
TRIM47Q96LD4 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.27□□□□□ -1.89
TRIM47Q96LD4 AC093423.1-201ENST00000440817 142 ntBASIC3.27□□□□□ -1.89
TRIM47Q96LD4 AL161788.1-201ENST00000441805 169 ntBASIC3.27□□□□□ -1.89
TRIM47Q96LD4 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.27□□□□□ -1.89
TRIM47Q96LD4 FGF7P7-201ENST00000514120 227 ntBASIC3.27□□□□□ -1.89
TRIM47Q96LD4 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
TRIM47Q96LD4 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
TRIM47Q96LD4 RNU5F-1-201ENST00000362507 117 ntBASIC3.26□□□□□ -1.89
TRIM47Q96LD4 U8.2-201ENST00000363156 134 ntBASIC3.26□□□□□ -1.89
TRIM47Q96LD4 RNA5SP68-201ENST00000363885 119 ntBASIC3.26□□□□□ -1.89
TRIM47Q96LD4 RNU6-1321P-201ENST00000390905 107 ntBASIC3.26□□□□□ -1.89
TRIM47Q96LD4 Y_RNA.596-201ENST00000410462 109 ntBASIC3.26□□□□□ -1.89
TRIM47Q96LD4 AC015922.2-201ENST00000435593 184 ntBASIC3.26□□□□□ -1.89
TRIM47Q96LD4 RNU7-67P-201ENST00000459003 62 ntBASIC3.26□□□□□ -1.89
TRIM47Q96LD4 SEM1P1-201ENST00000506694 209 ntBASIC3.26□□□□□ -1.89
TRIM47Q96LD4 SNORD67.1-201ENST00000516618 108 ntBASIC3.26□□□□□ -1.89
TRIM47Q96LD4 SNORA31.21-201ENST00000517180 77 ntBASIC3.26□□□□□ -1.89
TRIM47Q96LD4 SNORD53-201ENST00000579969 78 ntBASIC3.26□□□□□ -1.89
TRIM47Q96LD4 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC3.26□□□□□ -1.89
TRIM47Q96LD4 MIR6817-201ENST00000615588 66 ntBASIC3.26□□□□□ -1.89
TRIM47Q96LD4 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
TRIM47Q96LD4 RNU6-663P-201ENST00000391105 106 ntBASIC3.25□□□□□ -1.89
TRIM47Q96LD4 AL138827.1-201ENST00000402666 306 ntBASIC3.25□□□□□ -1.89
TRIM47Q96LD4 RNU7-35P-201ENST00000517174 62 ntBASIC3.25□□□□□ -1.89
TRIM47Q96LD4 AC024995.1-201ENST00000523014 93 ntBASIC3.25□□□□□ -1.89
TRIM47Q96LD4 MIR1297-201ENST00000637311 77 ntBASIC3.25□□□□□ -1.89
TRIM47Q96LD4 AL442644.1-201ENST00000454390 3105 ntBASIC3.25□□□□□ -1.89
TRIM47Q96LD4 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
TRIM47Q96LD4 MIR767-201ENST00000390228 109 ntBASIC3.24□□□□□ -1.89
TRIM47Q96LD4 AC003685.2-201ENST00000422795 395 ntBASIC3.24□□□□□ -1.89
TRIM47Q96LD4 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC3.24□□□□□ -1.89
TRIM47Q96LD4 RNU7-28P-201ENST00000516759 62 ntBASIC3.24□□□□□ -1.89
TRIM47Q96LD4 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC3.24□□□□□ -1.89
TRIM47Q96LD4 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC3.24□□□□□ -1.89
TRIM47Q96LD4 AL020996.3-201ENST00000606617 222 ntBASIC3.24□□□□□ -1.89
TRIM47Q96LD4 AC105081.1-201ENST00000617727 106 ntBASIC3.24□□□□□ -1.89
TRIM47Q96LD4 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
TRIM47Q96LD4 SNORA1.2-201ENST00000365189 134 ntBASIC3.23□□□□□ -1.89
TRIM47Q96LD4 RNU6-1083P-201ENST00000384022 107 ntBASIC3.23□□□□□ -1.89
TRIM47Q96LD4 MIR515-2-201ENST00000384883 83 ntBASIC3.23□□□□□ -1.89
TRIM47Q96LD4 MIR515-1-201ENST00000384884 83 ntBASIC3.23□□□□□ -1.89
TRIM47Q96LD4 AC245047.3-201ENST00000429428 127 ntBASIC3.23□□□□□ -1.89
TRIM47Q96LD4 snoU13.15-201ENST00000459407 104 ntBASIC3.23□□□□□ -1.89
TRIM47Q96LD4 RPS29P12-201ENST00000460178 152 ntBASIC3.23□□□□□ -1.89
TRIM47Q96LD4 RN7SL297P-201ENST00000483161 293 ntBASIC3.23□□□□□ -1.89
TRIM47Q96LD4 RNA5SP385-201ENST00000515947 110 ntBASIC3.23□□□□□ -1.89
TRIM47Q96LD4 RNA5SP148-201ENST00000516527 94 ntBASIC3.23□□□□□ -1.89
TRIM47Q96LD4 MIR4506-201ENST00000584693 77 ntBASIC3.23□□□□□ -1.89
TRIM47Q96LD4 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC3.23□□□□□ -1.89
TRIM47Q96LD4 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
TRIM47Q96LD4 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
TRIM47Q96LD4 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
TRIM47Q96LD4 RNU6-913P-201ENST00000390913 95 ntBASIC3.22□□□□□ -1.89
TRIM47Q96LD4 SRIP3-201ENST00000413200 219 ntBASIC3.22□□□□□ -1.89
TRIM47Q96LD4 AC245047.7-201ENST00000440265 293 ntBASIC3.22□□□□□ -1.89
TRIM47Q96LD4 RPS29P29-201ENST00000456396 171 ntBASIC3.22□□□□□ -1.89
TRIM47Q96LD4 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
TRIM47Q96LD4 Y_RNA.370-201ENST00000365589 108 ntBASIC3.21□□□□□ -1.9
TRIM47Q96LD4 SNORA3.2-201ENST00000408221 125 ntBASIC3.21□□□□□ -1.9
TRIM47Q96LD4 AL606517.2-201ENST00000442855 241 ntBASIC3.21□□□□□ -1.9
TRIM47Q96LD4 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC3.21□□□□□ -1.9
TRIM47Q96LD4 RNU7-85P-201ENST00000458851 63 ntBASIC3.21□□□□□ -1.9
TRIM47Q96LD4 RNU7-48P-201ENST00000458875 63 ntBASIC3.21□□□□□ -1.9
TRIM47Q96LD4 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC3.21□□□□□ -1.9
TRIM47Q96LD4 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC3.21□□□□□ -1.9
TRIM47Q96LD4 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC3.21□□□□□ -1.9
TRIM47Q96LD4 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 286 ms