Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 SNORD77.3-201ENST00000391113 65 ntBASIC1.05□□□□□ -2.24
PDLIM5Q96HC4 RNU5E-9P-201ENST00000411164 104 ntBASIC1.05□□□□□ -2.24
PDLIM5Q96HC4 MRPL35P3-201ENST00000421557 364 ntBASIC1.05□□□□□ -2.24
PDLIM5Q96HC4 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.05□□□□□ -2.24
PDLIM5Q96HC4 RNU6-237P-201ENST00000515985 71 ntBASIC1.05□□□□□ -2.24
PDLIM5Q96HC4 RNU7-121P-201ENST00000516604 62 ntBASIC1.05□□□□□ -2.24
PDLIM5Q96HC4 AC134878.1-201ENST00000619901 243 ntBASIC1.05□□□□□ -2.24
PDLIM5Q96HC4 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
PDLIM5Q96HC4 MIR520C-201ENST00000385005 87 ntBASIC1.04□□□□□ -2.24
PDLIM5Q96HC4 PCNPP3-201ENST00000393579 471 ntBASIC1.04□□□□□ -2.24
PDLIM5Q96HC4 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.04□□□□□ -2.24
PDLIM5Q96HC4 RNU6-1135P-201ENST00000411083 103 ntBASIC1.04□□□□□ -2.24
PDLIM5Q96HC4 AC006461.1-201ENST00000412637 326 ntBASIC1.04□□□□□ -2.24
PDLIM5Q96HC4 AC087499.4-201ENST00000448505 178 ntBASIC1.04□□□□□ -2.24
PDLIM5Q96HC4 RPS26P48-201ENST00000491713 339 ntBASIC1.04□□□□□ -2.24
PDLIM5Q96HC4 RNU7-41P-201ENST00000515917 61 ntBASIC1.04□□□□□ -2.24
PDLIM5Q96HC4 Y_RNA.662-201ENST00000516028 97 ntBASIC1.04□□□□□ -2.24
PDLIM5Q96HC4 SNORD116-25-201ENST00000516517 92 ntBASIC1.04□□□□□ -2.24
PDLIM5Q96HC4 RNU7-43P-201ENST00000516554 64 ntBASIC1.04□□□□□ -2.24
PDLIM5Q96HC4 SNORD36C-201ENST00000516733 66 ntBASIC1.04□□□□□ -2.24
PDLIM5Q96HC4 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.04□□□□□ -2.24
PDLIM5Q96HC4 MIR6078-201ENST00000611069 100 ntBASIC1.04□□□□□ -2.24
PDLIM5Q96HC4 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
PDLIM5Q96HC4 MIR376A2-201ENST00000636782 80 ntBASIC1.04□□□□□ -2.24
PDLIM5Q96HC4 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.04□□□□□ -2.24
PDLIM5Q96HC4 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
PDLIM5Q96HC4 RNU4-84P-201ENST00000364200 139 ntBASIC1.03□□□□□ -2.24
PDLIM5Q96HC4 SNORD114-24-201ENST00000365029 72 ntBASIC1.03□□□□□ -2.24
PDLIM5Q96HC4 Y_RNA.370-201ENST00000365589 108 ntBASIC1.03□□□□□ -2.24
PDLIM5Q96HC4 RNU6-1292P-201ENST00000383856 107 ntBASIC1.03□□□□□ -2.24
PDLIM5Q96HC4 RNU6-886P-201ENST00000384319 105 ntBASIC1.03□□□□□ -2.24
PDLIM5Q96HC4 MIR570-201ENST00000384917 97 ntBASIC1.03□□□□□ -2.24
PDLIM5Q96HC4 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
PDLIM5Q96HC4 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.03□□□□□ -2.24
PDLIM5Q96HC4 AC005840.1-201ENST00000498412 377 ntBASIC1.03□□□□□ -2.24
PDLIM5Q96HC4 AP003716.2-201ENST00000528260 108 ntBASIC1.03□□□□□ -2.24
PDLIM5Q96HC4 MIR3129-201ENST00000581095 76 ntBASIC1.03□□□□□ -2.24
PDLIM5Q96HC4 MIR4769-201ENST00000584126 77 ntBASIC1.03□□□□□ -2.24
PDLIM5Q96HC4 AL365205.2-201ENST00000594586 68 ntBASIC1.03□□□□□ -2.24
PDLIM5Q96HC4 SNORD114-21-201ENST00000606412 72 ntBASIC1.03□□□□□ -2.24
PDLIM5Q96HC4 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.03□□□□□ -2.24
PDLIM5Q96HC4 Y_RNA.140-201ENST00000363474 103 ntBASIC1.02□□□□□ -2.25
PDLIM5Q96HC4 Y_RNA.150-201ENST00000363562 102 ntBASIC1.02□□□□□ -2.25
PDLIM5Q96HC4 RNU6-597P-201ENST00000365620 102 ntBASIC1.02□□□□□ -2.25
PDLIM5Q96HC4 Y_RNA.410-201ENST00000383992 113 ntBASIC1.02□□□□□ -2.25
PDLIM5Q96HC4 Y_RNA.542-201ENST00000384641 111 ntBASIC1.02□□□□□ -2.25
PDLIM5Q96HC4 MIR200A-201ENST00000384875 90 ntBASIC1.02□□□□□ -2.25
PDLIM5Q96HC4 RNU6-239P-201ENST00000390990 99 ntBASIC1.02□□□□□ -2.25
PDLIM5Q96HC4 SNORA40.5-201ENST00000391061 128 ntBASIC1.02□□□□□ -2.25
PDLIM5Q96HC4 RNU6-394P-201ENST00000410735 107 ntBASIC1.02□□□□□ -2.25
PDLIM5Q96HC4 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.02□□□□□ -2.25
PDLIM5Q96HC4 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.02□□□□□ -2.25
PDLIM5Q96HC4 SNORD79.1-201ENST00000516069 84 ntBASIC1.02□□□□□ -2.25
PDLIM5Q96HC4 SNORA18.4-201ENST00000516440 124 ntBASIC1.02□□□□□ -2.25
PDLIM5Q96HC4 AP003484.1-201ENST00000530974 250 ntBASIC1.02□□□□□ -2.25
PDLIM5Q96HC4 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
PDLIM5Q96HC4 MIR4295-201ENST00000585286 85 ntBASIC1.02□□□□□ -2.25
PDLIM5Q96HC4 PRELID3BP2-201ENST00000605362 201 ntBASIC1.02□□□□□ -2.25
PDLIM5Q96HC4 AC103810.9-201ENST00000606688 112 ntBASIC1.02□□□□□ -2.25
PDLIM5Q96HC4 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.01□□□□□ -2.25
PDLIM5Q96HC4 SNORD115-34-201ENST00000362441 82 ntBASIC1.01□□□□□ -2.25
PDLIM5Q96HC4 SNORD115-12-201ENST00000362583 82 ntBASIC1.01□□□□□ -2.25
PDLIM5Q96HC4 SNORD115-29-201ENST00000362834 82 ntBASIC1.01□□□□□ -2.25
PDLIM5Q96HC4 SNORD115-9-201ENST00000362912 82 ntBASIC1.01□□□□□ -2.25
PDLIM5Q96HC4 SNORD115-21-201ENST00000362963 81 ntBASIC1.01□□□□□ -2.25
PDLIM5Q96HC4 SNORD115-14-201ENST00000363090 81 ntBASIC1.01□□□□□ -2.25
PDLIM5Q96HC4 SNORD115-13-201ENST00000363358 82 ntBASIC1.01□□□□□ -2.25
PDLIM5Q96HC4 SNORD115-41-201ENST00000363608 82 ntBASIC1.01□□□□□ -2.25
PDLIM5Q96HC4 SNORD115-11-201ENST00000363616 82 ntBASIC1.01□□□□□ -2.25
PDLIM5Q96HC4 SNORD115-5-201ENST00000363633 82 ntBASIC1.01□□□□□ -2.25
PDLIM5Q96HC4 SNORD115-39-201ENST00000363694 82 ntBASIC1.01□□□□□ -2.25
PDLIM5Q96HC4 SNORD115-4-201ENST00000363810 82 ntBASIC1.01□□□□□ -2.25
PDLIM5Q96HC4 SNORD115-16-201ENST00000363887 82 ntBASIC1.01□□□□□ -2.25
PDLIM5Q96HC4 SNORD115-6-201ENST00000363942 82 ntBASIC1.01□□□□□ -2.25
PDLIM5Q96HC4 SNORD115-42-201ENST00000364273 82 ntBASIC1.01□□□□□ -2.25
PDLIM5Q96HC4 SNORD115-15-201ENST00000364809 81 ntBASIC1.01□□□□□ -2.25
PDLIM5Q96HC4 SNORD115-1-201ENST00000364961 82 ntBASIC1.01□□□□□ -2.25
PDLIM5Q96HC4 SNORD115-26-201ENST00000365067 82 ntBASIC1.01□□□□□ -2.25
PDLIM5Q96HC4 SNORD115-10-201ENST00000365073 81 ntBASIC1.01□□□□□ -2.25
PDLIM5Q96HC4 SNORA1.2-201ENST00000365189 134 ntBASIC1.01□□□□□ -2.25
PDLIM5Q96HC4 SNORD115-43-201ENST00000365503 82 ntBASIC1.01□□□□□ -2.25
PDLIM5Q96HC4 SNORD115-36-201ENST00000365629 82 ntBASIC1.01□□□□□ -2.25
PDLIM5Q96HC4 RNU6-1336P-201ENST00000383886 109 ntBASIC1.01□□□□□ -2.25
PDLIM5Q96HC4 SNORA24-201ENST00000384096 131 ntBASIC1.01□□□□□ -2.25
PDLIM5Q96HC4 Y_RNA.537-201ENST00000384626 109 ntBASIC1.01□□□□□ -2.25
PDLIM5Q96HC4 RNU6-768P-201ENST00000384683 107 ntBASIC1.01□□□□□ -2.25
PDLIM5Q96HC4 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.01□□□□□ -2.25
PDLIM5Q96HC4 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.01□□□□□ -2.25
PDLIM5Q96HC4 AC087343.1-201ENST00000477341 475 ntBASIC1.01□□□□□ -2.25
PDLIM5Q96HC4 MIR3668-201ENST00000582138 75 ntBASIC1.01□□□□□ -2.25
PDLIM5Q96HC4 SNORD115-40-201ENST00000606510 82 ntBASIC1.01□□□□□ -2.25
PDLIM5Q96HC4 MIR4791-201ENST00000607666 84 ntBASIC1.01□□□□□ -2.25
PDLIM5Q96HC4 AC098479.1-201ENST00000609225 154 ntBASIC1.01□□□□□ -2.25
PDLIM5Q96HC4 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
PDLIM5Q96HC4 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1□□□□□ -2.25
PDLIM5Q96HC4 Y_RNA.241-201ENST00000364470 117 ntBASIC1□□□□□ -2.25
PDLIM5Q96HC4 RNU6-1082P-201ENST00000364574 107 ntBASIC1□□□□□ -2.25
PDLIM5Q96HC4 Y_RNA.357-201ENST00000365487 109 ntBASIC1□□□□□ -2.25
PDLIM5Q96HC4 RNU6-1189P-201ENST00000383958 107 ntBASIC1□□□□□ -2.25
PDLIM5Q96HC4 Y_RNA.440-201ENST00000384120 114 ntBASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms