Protein–RNA interactions for Protein: Q96BD8

SKA1, Spindle and kinetochore-associated protein 1, humanhuman

Predictions only

Length 255 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1Q96BD8 RNU4-10P-201ENST00000364383 140 ntBASIC0.74□□□□□ -2.29
SKA1Q96BD8 SNORA27-201ENST00000384323 126 ntBASIC0.74□□□□□ -2.29
SKA1Q96BD8 RNU6-1289P-201ENST00000384431 106 ntBASIC0.74□□□□□ -2.29
SKA1Q96BD8 SNORD38B-201ENST00000384690 67 ntBASIC0.74□□□□□ -2.29
SKA1Q96BD8 RNU6-985P-201ENST00000410182 104 ntBASIC0.74□□□□□ -2.29
SKA1Q96BD8 RNU7-73P-201ENST00000458743 63 ntBASIC0.74□□□□□ -2.29
SKA1Q96BD8 RNA5SP121-201ENST00000516537 101 ntBASIC0.74□□□□□ -2.29
SKA1Q96BD8 Z83818.1-201ENST00000603584 150 ntBASIC0.74□□□□□ -2.29
SKA1Q96BD8 MIR6513-201ENST00000621188 64 ntBASIC0.74□□□□□ -2.29
SKA1Q96BD8 SNORD38B-202ENST00000625943 69 ntBASIC0.74□□□□□ -2.29
SKA1Q96BD8 Y_RNA.275-201ENST00000364726 110 ntBASIC0.73□□□□□ -2.29
SKA1Q96BD8 Y_RNA.494-201ENST00000384432 111 ntBASIC0.73□□□□□ -2.29
SKA1Q96BD8 MIR508-201ENST00000384857 115 ntBASIC0.73□□□□□ -2.29
SKA1Q96BD8 MIR518F-201ENST00000384973 87 ntBASIC0.73□□□□□ -2.29
SKA1Q96BD8 RNU6-1203P-201ENST00000410703 110 ntBASIC0.73□□□□□ -2.29
SKA1Q96BD8 RNA5SP222-201ENST00000411039 105 ntBASIC0.73□□□□□ -2.29
SKA1Q96BD8 RNU7-62P-201ENST00000458856 62 ntBASIC0.73□□□□□ -2.29
SKA1Q96BD8 RNU6-977P-201ENST00000516411 103 ntBASIC0.73□□□□□ -2.29
SKA1Q96BD8 SNORA18.4-201ENST00000516440 124 ntBASIC0.73□□□□□ -2.29
SKA1Q96BD8 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.73□□□□□ -2.29
SKA1Q96BD8 Y_RNA.229-201ENST00000364347 113 ntBASIC0.72□□□□□ -2.29
SKA1Q96BD8 SNORA33.2-201ENST00000365413 134 ntBASIC0.72□□□□□ -2.29
SKA1Q96BD8 SNORD61-201ENST00000384252 73 ntBASIC0.72□□□□□ -2.29
SKA1Q96BD8 RNY1P4-201ENST00000384595 115 ntBASIC0.72□□□□□ -2.29
SKA1Q96BD8 MIR626-201ENST00000385032 94 ntBASIC0.72□□□□□ -2.29
SKA1Q96BD8 Y_RNA.604-201ENST00000410574 102 ntBASIC0.72□□□□□ -2.29
SKA1Q96BD8 RNU2-55P-201ENST00000411146 174 ntBASIC0.72□□□□□ -2.29
SKA1Q96BD8 RPS29P24-201ENST00000486345 171 ntBASIC0.72□□□□□ -2.29
SKA1Q96BD8 RNA5SP436-201ENST00000516020 115 ntBASIC0.72□□□□□ -2.29
SKA1Q96BD8 RNU6-1270P-201ENST00000517128 108 ntBASIC0.72□□□□□ -2.29
SKA1Q96BD8 DEFB108E-201ENST00000524692 240 ntBASIC0.72□□□□□ -2.29
SKA1Q96BD8 AC044792.1-201ENST00000593294 196 ntBASIC0.72□□□□□ -2.29
SKA1Q96BD8 MIR6779-201ENST00000617283 64 ntBASIC0.72□□□□□ -2.29
SKA1Q96BD8 RNU6-888P-201ENST00000363010 101 ntBASIC0.71□□□□□ -2.3
SKA1Q96BD8 RNU6-713P-201ENST00000384761 107 ntBASIC0.71□□□□□ -2.3
SKA1Q96BD8 MIR520F-201ENST00000384824 87 ntBASIC0.71□□□□□ -2.3
SKA1Q96BD8 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.71□□□□□ -2.3
SKA1Q96BD8 SNORD83.1-201ENST00000411362 77 ntBASIC0.71□□□□□ -2.3
SKA1Q96BD8 MTND5P15-201ENST00000434246 349 ntBASIC0.71□□□□□ -2.3
SKA1Q96BD8 MTND5P22-201ENST00000458380 195 ntBASIC0.71□□□□□ -2.3
SKA1Q96BD8 RNU6-1299P-201ENST00000516316 100 ntBASIC0.71□□□□□ -2.3
SKA1Q96BD8 AC018659.1-201ENST00000551083 169 ntBASIC0.71□□□□□ -2.3
SKA1Q96BD8 MIR4771-2-201ENST00000577758 74 ntBASIC0.71□□□□□ -2.3
SKA1Q96BD8 MIR4771-1-201ENST00000582617 74 ntBASIC0.71□□□□□ -2.3
SKA1Q96BD8 RNA5SP347-201ENST00000362445 119 ntBASIC0.7□□□□□ -2.3
SKA1Q96BD8 Y_RNA.44-201ENST00000362676 108 ntBASIC0.7□□□□□ -2.3
SKA1Q96BD8 RNU2-70P-201ENST00000410718 179 ntBASIC0.7□□□□□ -2.3
SKA1Q96BD8 RNU6-938P-201ENST00000411285 103 ntBASIC0.7□□□□□ -2.3
SKA1Q96BD8 RNU4-54P-201ENST00000516428 129 ntBASIC0.7□□□□□ -2.3
SKA1Q96BD8 Y_RNA.701-201ENST00000516812 110 ntBASIC0.7□□□□□ -2.3
SKA1Q96BD8 RNU6-570P-201ENST00000517051 105 ntBASIC0.7□□□□□ -2.3
SKA1Q96BD8 RNU6-1137P-201ENST00000517073 99 ntBASIC0.7□□□□□ -2.3
SKA1Q96BD8 SNORA36.2-201ENST00000384004 127 ntBASIC0.69□□□□□ -2.3
SKA1Q96BD8 RNY3P5-201ENST00000384127 102 ntBASIC0.69□□□□□ -2.3
SKA1Q96BD8 AC090844.1-201ENST00000422019 156 ntBASIC0.69□□□□□ -2.3
SKA1Q96BD8 snoU13.21-201ENST00000459368 105 ntBASIC0.69□□□□□ -2.3
SKA1Q96BD8 TRBVB-201ENST00000477100 408 ntBASIC0.69□□□□□ -2.3
SKA1Q96BD8 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.69□□□□□ -2.3
SKA1Q96BD8 Z97988.1-201ENST00000637697 135 ntBASIC0.69□□□□□ -2.3
SKA1Q96BD8 RNU6-369P-201ENST00000362515 102 ntBASIC0.68□□□□□ -2.3
SKA1Q96BD8 MIR548A2-201ENST00000384956 97 ntBASIC0.68□□□□□ -2.3
SKA1Q96BD8 MIR573-201ENST00000384964 99 ntBASIC0.68□□□□□ -2.3
SKA1Q96BD8 MIR520H-201ENST00000385126 88 ntBASIC0.68□□□□□ -2.3
SKA1Q96BD8 RNU6-733P-201ENST00000410759 104 ntBASIC0.68□□□□□ -2.3
SKA1Q96BD8 AC244023.1-201ENST00000426884 112 ntBASIC0.68□□□□□ -2.3
SKA1Q96BD8 RNU7-96P-201ENST00000459535 64 ntBASIC0.68□□□□□ -2.3
SKA1Q96BD8 SNORD36C-201ENST00000516733 66 ntBASIC0.68□□□□□ -2.3
SKA1Q96BD8 AC004817.2-201ENST00000561794 651 ntBASIC0.68□□□□□ -2.3
SKA1Q96BD8 AC242498.1-201ENST00000604134 111 ntBASIC0.68□□□□□ -2.3
SKA1Q96BD8 MIR8055-201ENST00000610739 97 ntBASIC0.68□□□□□ -2.3
SKA1Q96BD8 Y_RNA.205-201ENST00000364128 113 ntBASIC0.67□□□□□ -2.3
SKA1Q96BD8 SNORA1.1-201ENST00000364671 133 ntBASIC0.67□□□□□ -2.3
SKA1Q96BD8 Y_RNA.410-201ENST00000383992 113 ntBASIC0.67□□□□□ -2.3
SKA1Q96BD8 Y_RNA.432-201ENST00000384087 111 ntBASIC0.67□□□□□ -2.3
SKA1Q96BD8 RNU6-913P-201ENST00000390913 95 ntBASIC0.67□□□□□ -2.3
SKA1Q96BD8 RNA5SP153-201ENST00000516498 76 ntBASIC0.67□□□□□ -2.3
SKA1Q96BD8 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.67□□□□□ -2.3
SKA1Q96BD8 U6.104-201ENST00000637979 90 ntBASIC0.67□□□□□ -2.3
SKA1Q96BD8 Y_RNA.117-201ENST00000363294 101 ntBASIC0.66□□□□□ -2.3
SKA1Q96BD8 RNU4-45P-201ENST00000365469 141 ntBASIC0.66□□□□□ -2.3
SKA1Q96BD8 Y_RNA.572-201ENST00000384757 98 ntBASIC0.66□□□□□ -2.3
SKA1Q96BD8 MTCYBP6-201ENST00000441810 138 ntBASIC0.66□□□□□ -2.3
SKA1Q96BD8 MIR18B-201ENST00000454574 71 ntBASIC0.66□□□□□ -2.3
SKA1Q96BD8 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.66□□□□□ -2.3
SKA1Q96BD8 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
SKA1Q96BD8 SNORD114-23-201ENST00000363536 72 ntBASIC0.65□□□□□ -2.31
SKA1Q96BD8 Y_RNA.634-201ENST00000364811 113 ntBASIC0.65□□□□□ -2.31
SKA1Q96BD8 RNU6-945P-201ENST00000383947 107 ntBASIC0.65□□□□□ -2.31
SKA1Q96BD8 MIR193B-201ENST00000384907 83 ntBASIC0.65□□□□□ -2.31
SKA1Q96BD8 SNORD77.3-201ENST00000391113 65 ntBASIC0.65□□□□□ -2.31
SKA1Q96BD8 RNU6-1109P-201ENST00000391187 107 ntBASIC0.65□□□□□ -2.31
SKA1Q96BD8 MIR936-201ENST00000401264 98 ntBASIC0.65□□□□□ -2.31
SKA1Q96BD8 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.65□□□□□ -2.31
SKA1Q96BD8 AC004812.1-201ENST00000540773 146 ntBASIC0.65□□□□□ -2.31
SKA1Q96BD8 MIR4676-201ENST00000583078 72 ntBASIC0.65□□□□□ -2.31
SKA1Q96BD8 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.65□□□□□ -2.31
SKA1Q96BD8 RNU6-1189P-201ENST00000383958 107 ntBASIC0.64□□□□□ -2.31
SKA1Q96BD8 Y_RNA.422-201ENST00000384054 114 ntBASIC0.64□□□□□ -2.31
SKA1Q96BD8 RNU6-177P-201ENST00000411257 104 ntBASIC0.64□□□□□ -2.31
SKA1Q96BD8 MIR4804-201ENST00000581683 73 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms