Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 RNU6-457P-201ENST00000363999 107 ntBASIC2.04□□□□□ -2.08
ERCC4Q92889 Y_RNA.494-201ENST00000384432 111 ntBASIC2.04□□□□□ -2.08
ERCC4Q92889 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.04□□□□□ -2.08
ERCC4Q92889 RNU2-13P-201ENST00000515909 113 ntBASIC2.04□□□□□ -2.08
ERCC4Q92889 IGKV1-22-201ENST00000524313 326 ntBASIC2.04□□□□□ -2.08
ERCC4Q92889 RNU6-349P-201ENST00000362402 107 ntBASIC2.03□□□□□ -2.08
ERCC4Q92889 Y_RNA.273-201ENST00000364703 102 ntBASIC2.03□□□□□ -2.08
ERCC4Q92889 SNORD58C-201ENST00000365223 64 ntBASIC2.03□□□□□ -2.08
ERCC4Q92889 MIR9-3-201ENST00000385084 90 ntBASIC2.03□□□□□ -2.08
ERCC4Q92889 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
ERCC4Q92889 AC019129.1-201ENST00000403786 261 ntBASIC2.03□□□□□ -2.08
ERCC4Q92889 MIR1289-2-201ENST00000408360 111 ntBASIC2.03□□□□□ -2.08
ERCC4Q92889 JTBP1-201ENST00000441314 247 ntBASIC2.03□□□□□ -2.08
ERCC4Q92889 RNU7-181P-201ENST00000517234 74 ntBASIC2.03□□□□□ -2.08
ERCC4Q92889 MIR4769-201ENST00000584126 77 ntBASIC2.03□□□□□ -2.08
ERCC4Q92889 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
ERCC4Q92889 RNU6-834P-201ENST00000362367 110 ntBASIC2.02□□□□□ -2.09
ERCC4Q92889 RNU6-439P-201ENST00000384188 106 ntBASIC2.02□□□□□ -2.09
ERCC4Q92889 SNORA27-201ENST00000384323 126 ntBASIC2.02□□□□□ -2.09
ERCC4Q92889 MIR1267-201ENST00000408723 78 ntBASIC2.02□□□□□ -2.09
ERCC4Q92889 snoU13.23-201ENST00000458863 104 ntBASIC2.02□□□□□ -2.09
ERCC4Q92889 RNU7-80P-201ENST00000459562 61 ntBASIC2.02□□□□□ -2.09
ERCC4Q92889 AC108210.2-201ENST00000503681 201 ntBASIC2.02□□□□□ -2.09
ERCC4Q92889 RNU6-998P-201ENST00000515894 101 ntBASIC2.02□□□□□ -2.09
ERCC4Q92889 RN7SKP19-201ENST00000516016 252 ntBASIC2.02□□□□□ -2.09
ERCC4Q92889 SNORA18.7-201ENST00000516910 131 ntBASIC2.02□□□□□ -2.09
ERCC4Q92889 Y_RNA.241-201ENST00000364470 117 ntBASIC2.01□□□□□ -2.09
ERCC4Q92889 Y_RNA.353-201ENST00000365440 108 ntBASIC2.01□□□□□ -2.09
ERCC4Q92889 SNORA24-201ENST00000384096 131 ntBASIC2.01□□□□□ -2.09
ERCC4Q92889 MIR653-201ENST00000385279 96 ntBASIC2.01□□□□□ -2.09
ERCC4Q92889 SNORA31.4-201ENST00000516049 129 ntBASIC2.01□□□□□ -2.09
ERCC4Q92889 RNU6-917P-201ENST00000516294 104 ntBASIC2.01□□□□□ -2.09
ERCC4Q92889 AC090821.2-201ENST00000523552 176 ntBASIC2.01□□□□□ -2.09
ERCC4Q92889 SNORA77B-201ENST00000578179 125 ntBASIC2.01□□□□□ -2.09
ERCC4Q92889 AL359881.1-201ENST00000602916 267 ntBASIC2.01□□□□□ -2.09
ERCC4Q92889 AC091932.4-201ENST00000623386 200 ntBASIC2.01□□□□□ -2.09
ERCC4Q92889 SNORA1.2-201ENST00000365189 134 ntBASIC2□□□□□ -2.09
ERCC4Q92889 Y_RNA.351-201ENST00000365436 96 ntBASIC2□□□□□ -2.09
ERCC4Q92889 RNU6-482P-201ENST00000391068 107 ntBASIC2□□□□□ -2.09
ERCC4Q92889 Y_RNA.630-201ENST00000411370 108 ntBASIC2□□□□□ -2.09
ERCC4Q92889 SNORD123-201ENST00000459473 70 ntBASIC2□□□□□ -2.09
ERCC4Q92889 RNU7-96P-201ENST00000459535 64 ntBASIC2□□□□□ -2.09
ERCC4Q92889 RPS29P24-201ENST00000486345 171 ntBASIC2□□□□□ -2.09
ERCC4Q92889 RNA5SP182-201ENST00000516064 82 ntBASIC2□□□□□ -2.09
ERCC4Q92889 RNU6-781P-201ENST00000516377 101 ntBASIC2□□□□□ -2.09
ERCC4Q92889 SNORA74.3-201ENST00000517108 154 ntBASIC2□□□□□ -2.09
ERCC4Q92889 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC2□□□□□ -2.09
ERCC4Q92889 MIR548AR-201ENST00000582191 57 ntBASIC2□□□□□ -2.09
ERCC4Q92889 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
ERCC4Q92889 Y_RNA.454-201ENST00000384224 113 ntBASIC1.99□□□□□ -2.09
ERCC4Q92889 U8.13-201ENST00000390842 128 ntBASIC1.99□□□□□ -2.09
ERCC4Q92889 SNORD28B-201ENST00000390993 75 ntBASIC1.99□□□□□ -2.09
ERCC4Q92889 AC103810.8-201ENST00000607347 118 ntBASIC1.99□□□□□ -2.09
ERCC4Q92889 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
ERCC4Q92889 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
ERCC4Q92889 ICE2P2-201ENST00000483823 2787 ntBASIC1.98□□□□□ -2.09
ERCC4Q92889 RNU6-414P-201ENST00000363705 104 ntBASIC1.98□□□□□ -2.09
ERCC4Q92889 RNU1-133P-201ENST00000364867 167 ntBASIC1.98□□□□□ -2.09
ERCC4Q92889 RNA5SP363-201ENST00000365072 115 ntBASIC1.98□□□□□ -2.09
ERCC4Q92889 RNY1P6-201ENST00000384193 109 ntBASIC1.98□□□□□ -2.09
ERCC4Q92889 RNU5E-3P-201ENST00000515913 68 ntBASIC1.98□□□□□ -2.09
ERCC4Q92889 SUMO2P16-201ENST00000519475 264 ntBASIC1.98□□□□□ -2.09
ERCC4Q92889 AC133485.4-201ENST00000561835 220 ntBASIC1.98□□□□□ -2.09
ERCC4Q92889 AC138907.4-201ENST00000570107 226 ntBASIC1.98□□□□□ -2.09
ERCC4Q92889 AC015688.6-201ENST00000577737 104 ntBASIC1.98□□□□□ -2.09
ERCC4Q92889 FAM106DP-201ENST00000586416 501 ntBASIC1.98□□□□□ -2.09
ERCC4Q92889 U6.95-201ENST00000636931 70 ntBASIC1.98□□□□□ -2.09
ERCC4Q92889 Y_RNA.366-201ENST00000365540 102 ntBASIC1.97□□□□□ -2.09
ERCC4Q92889 Y_RNA.370-201ENST00000365589 108 ntBASIC1.97□□□□□ -2.09
ERCC4Q92889 MIR583-201ENST00000384846 75 ntBASIC1.97□□□□□ -2.09
ERCC4Q92889 SNORA44.1-201ENST00000517031 108 ntBASIC1.97□□□□□ -2.09
ERCC4Q92889 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.96□□□□□ -2.1
ERCC4Q92889 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.96□□□□□ -2.1
ERCC4Q92889 SNORA40.18-201ENST00000391200 128 ntBASIC1.96□□□□□ -2.1
ERCC4Q92889 RNU6-240P-201ENST00000516098 97 ntBASIC1.96□□□□□ -2.1
ERCC4Q92889 RNU6-295P-201ENST00000516901 104 ntBASIC1.96□□□□□ -2.1
ERCC4Q92889 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.96□□□□□ -2.1
ERCC4Q92889 MIR3618-201ENST00000580330 88 ntBASIC1.96□□□□□ -2.1
ERCC4Q92889 MIR8081-201ENST00000611533 95 ntBASIC1.96□□□□□ -2.1
ERCC4Q92889 AL137067.1-201ENST00000615933 120 ntBASIC1.96□□□□□ -2.1
ERCC4Q92889 RNU6-215P-201ENST00000365169 102 ntBASIC1.95□□□□□ -2.1
ERCC4Q92889 Y_RNA.537-201ENST00000384626 109 ntBASIC1.95□□□□□ -2.1
ERCC4Q92889 MIR513A1-201ENST00000385138 129 ntBASIC1.95□□□□□ -2.1
ERCC4Q92889 AL035398.1-201ENST00000430869 322 ntBASIC1.95□□□□□ -2.1
ERCC4Q92889 AL591806.2-201ENST00000433122 173 ntBASIC1.95□□□□□ -2.1
ERCC4Q92889 AC107297.1-201ENST00000459991 176 ntBASIC1.95□□□□□ -2.1
ERCC4Q92889 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.95□□□□□ -2.1
ERCC4Q92889 RNU6-1061P-201ENST00000516530 99 ntBASIC1.95□□□□□ -2.1
ERCC4Q92889 RNU7-70P-201ENST00000516941 66 ntBASIC1.95□□□□□ -2.1
ERCC4Q92889 AC106754.2-201ENST00000623006 233 ntBASIC1.95□□□□□ -2.1
ERCC4Q92889 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.95□□□□□ -2.1
ERCC4Q92889 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.94□□□□□ -2.1
ERCC4Q92889 RNU6-1144P-201ENST00000384247 104 ntBASIC1.94□□□□□ -2.1
ERCC4Q92889 RNU6-997P-201ENST00000384725 107 ntBASIC1.94□□□□□ -2.1
ERCC4Q92889 MIR30A-201ENST00000385092 71 ntBASIC1.94□□□□□ -2.1
ERCC4Q92889 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
ERCC4Q92889 SNORA26.9-201ENST00000391322 122 ntBASIC1.94□□□□□ -2.1
ERCC4Q92889 RNA5SP136-201ENST00000410906 107 ntBASIC1.94□□□□□ -2.1
ERCC4Q92889 RPS29P29-201ENST00000456396 171 ntBASIC1.94□□□□□ -2.1
ERCC4Q92889 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 243.3 ms