| STAG1 | Q8WVM7 | Y_RNA.680-201 | ENST00000516441 | 93 nt | BASIC | 1.52 | □□□□□ -2.17 | | |
| STAG1 | Q8WVM7 | MIR2115-201 | ENST00000516657 | 100 nt | BASIC | 1.52 | □□□□□ -2.17 | | |
| STAG1 | Q8WVM7 | RNU2-4P-201 | ENST00000606190 | 192 nt | BASIC | 1.52 | □□□□□ -2.17 | | |
| STAG1 | Q8WVM7 | SENP7-207 | ENST00000394095 | 4945 nt | APPRIS P3 TSL 1 (best) BASIC | 1.51 | □□□□□ -2.17 | | |
| STAG1 | Q8WVM7 | Y_RNA.182-201 | ENST00000363880 | 111 nt | BASIC | 1.51 | □□□□□ -2.17 | | |
| STAG1 | Q8WVM7 | RNU6-923P-201 | ENST00000364753 | 107 nt | BASIC | 1.51 | □□□□□ -2.17 | | |
| STAG1 | Q8WVM7 | RNU6-396P-201 | ENST00000365369 | 105 nt | BASIC | 1.51 | □□□□□ -2.17 | | |
| STAG1 | Q8WVM7 | SNORA27-201 | ENST00000384323 | 126 nt | BASIC | 1.51 | □□□□□ -2.17 | | |
| STAG1 | Q8WVM7 | SNORD28B-201 | ENST00000390993 | 75 nt | BASIC | 1.51 | □□□□□ -2.17 | | |
| STAG1 | Q8WVM7 | AL138752.1-201 | ENST00000452964 | 351 nt | BASIC | 1.51 | □□□□□ -2.17 | | |
| STAG1 | Q8WVM7 | RNU2-13P-201 | ENST00000515909 | 113 nt | BASIC | 1.51 | □□□□□ -2.17 | | |
| STAG1 | Q8WVM7 | Y_RNA.700-201 | ENST00000516806 | 100 nt | BASIC | 1.51 | □□□□□ -2.17 | | |
| STAG1 | Q8WVM7 | AC108706.1-201 | ENST00000611053 | 297 nt | BASIC | 1.51 | □□□□□ -2.17 | | |
| STAG1 | Q8WVM7 | MIR8070-201 | ENST00000616510 | 88 nt | BASIC | 1.51 | □□□□□ -2.17 | | |
| STAG1 | Q8WVM7 | SEPT14P17-201 | ENST00000617978 | 177 nt | BASIC | 1.51 | □□□□□ -2.17 | | |
| STAG1 | Q8WVM7 | RNU6-275P-201 | ENST00000364910 | 107 nt | BASIC | 1.5 | □□□□□ -2.17 | | |
| STAG1 | Q8WVM7 | RNU6-1292P-201 | ENST00000383856 | 107 nt | BASIC | 1.5 | □□□□□ -2.17 | | |
| STAG1 | Q8WVM7 | RNU7-96P-201 | ENST00000459535 | 64 nt | BASIC | 1.5 | □□□□□ -2.17 | | |
| STAG1 | Q8WVM7 | AC090821.2-201 | ENST00000523552 | 176 nt | BASIC | 1.5 | □□□□□ -2.17 | | |
| STAG1 | Q8WVM7 | Y_RNA.75-201 | ENST00000362927 | 97 nt | BASIC | 1.49 | □□□□□ -2.17 | | |
| STAG1 | Q8WVM7 | Y_RNA.91-201 | ENST00000363042 | 107 nt | BASIC | 1.49 | □□□□□ -2.17 | | |
| STAG1 | Q8WVM7 | RNU6-53P-201 | ENST00000365367 | 106 nt | BASIC | 1.49 | □□□□□ -2.17 | | |
| STAG1 | Q8WVM7 | SNORA24-201 | ENST00000384096 | 131 nt | BASIC | 1.49 | □□□□□ -2.17 | | |
| STAG1 | Q8WVM7 | MIR200A-201 | ENST00000384875 | 90 nt | BASIC | 1.49 | □□□□□ -2.17 | | |
| STAG1 | Q8WVM7 | RNA5SP247-201 | ENST00000411181 | 105 nt | BASIC | 1.49 | □□□□□ -2.17 | | |
| STAG1 | Q8WVM7 | AC090155.2-201 | ENST00000518854 | 267 nt | TSL 3 BASIC | 1.49 | □□□□□ -2.17 | | |
| STAG1 | Q8WVM7 | MIR378D2-201 | ENST00000580636 | 98 nt | BASIC | 1.49 | □□□□□ -2.17 | | |
| STAG1 | Q8WVM7 | RNU1-124P-201 | ENST00000363861 | 145 nt | BASIC | 1.48 | □□□□□ -2.17 | | |
| STAG1 | Q8WVM7 | Y_RNA.454-201 | ENST00000384224 | 113 nt | BASIC | 1.48 | □□□□□ -2.17 | | |
| STAG1 | Q8WVM7 | MIR19B1-201 | ENST00000384829 | 87 nt | BASIC | 1.48 | □□□□□ -2.17 | | |
| STAG1 | Q8WVM7 | RNU6ATAC8P-201 | ENST00000408460 | 126 nt | BASIC | 1.48 | □□□□□ -2.17 | | |
| STAG1 | Q8WVM7 | RNA5SP261-201 | ENST00000410536 | 106 nt | BASIC | 1.48 | □□□□□ -2.17 | | |
| STAG1 | Q8WVM7 | RNU7-21P-201 | ENST00000459430 | 62 nt | BASIC | 1.48 | □□□□□ -2.17 | | |
| STAG1 | Q8WVM7 | RNU7-80P-201 | ENST00000459562 | 61 nt | BASIC | 1.48 | □□□□□ -2.17 | | |
| STAG1 | Q8WVM7 | RPS29P24-201 | ENST00000486345 | 171 nt | BASIC | 1.48 | □□□□□ -2.17 | | |
| STAG1 | Q8WVM7 | RPS26P48-201 | ENST00000491713 | 339 nt | BASIC | 1.48 | □□□□□ -2.17 | | |
| STAG1 | Q8WVM7 | RNY3P16-201 | ENST00000516338 | 101 nt | BASIC | 1.48 | □□□□□ -2.17 | | |
| STAG1 | Q8WVM7 | AP003716.2-201 | ENST00000528260 | 108 nt | BASIC | 1.48 | □□□□□ -2.17 | | |
| STAG1 | Q8WVM7 | AC007751.1-201 | ENST00000529260 | 376 nt | BASIC | 1.48 | □□□□□ -2.17 | | |
| STAG1 | Q8WVM7 | MRPS18CP4-201 | ENST00000535821 | 231 nt | BASIC | 1.48 | □□□□□ -2.17 | | |
| STAG1 | Q8WVM7 | AC010177.1-201 | ENST00000547819 | 366 nt | TSL 3 BASIC | 1.48 | □□□□□ -2.17 | | |
| STAG1 | Q8WVM7 | MIR6078-201 | ENST00000611069 | 100 nt | BASIC | 1.48 | □□□□□ -2.17 | | |
| STAG1 | Q8WVM7 | Y_RNA.226-201 | ENST00000364337 | 114 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| STAG1 | Q8WVM7 | RNU6-312P-201 | ENST00000364629 | 107 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| STAG1 | Q8WVM7 | RNU6-643P-201 | ENST00000384018 | 107 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| STAG1 | Q8WVM7 | AL365205.2-201 | ENST00000594586 | 68 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| STAG1 | Q8WVM7 | AC072026.1-201 | ENST00000605023 | 201 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| STAG1 | Q8WVM7 | MIR548A2-201 | ENST00000384956 | 97 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| STAG1 | Q8WVM7 | AL135790.1-201 | ENST00000427161 | 157 nt | TSL 3 BASIC | 1.46 | □□□□□ -2.18 | | |
| STAG1 | Q8WVM7 | AL035398.1-201 | ENST00000430869 | 322 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| STAG1 | Q8WVM7 | RNU7-73P-201 | ENST00000458743 | 63 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| STAG1 | Q8WVM7 | RNA5SP404-201 | ENST00000517118 | 132 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| STAG1 | Q8WVM7 | MIR4308-201 | ENST00000580634 | 81 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| STAG1 | Q8WVM7 | AP000753.3-201 | ENST00000604083 | 169 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| STAG1 | Q8WVM7 | RNU6-379P-201 | ENST00000363813 | 104 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| STAG1 | Q8WVM7 | SNORA25.7-201 | ENST00000364375 | 127 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| STAG1 | Q8WVM7 | RNU7-70P-201 | ENST00000516941 | 66 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| STAG1 | Q8WVM7 | AC012676.2-201 | ENST00000619258 | 186 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| STAG1 | Q8WVM7 | AC091895.1-201 | ENST00000624494 | 256 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| STAG1 | Q8WVM7 | MTND1P7-201 | ENST00000632801 | 297 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| STAG1 | Q8WVM7 | C9orf84-204 | ENST00000394777 | 4955 nt | APPRIS ALT2 TSL 1 (best) BASIC | 1.44 | □□□□□ -2.18 | | |
| STAG1 | Q8WVM7 | MIR302B-201 | ENST00000362188 | 73 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| STAG1 | Q8WVM7 | Y_RNA.23-201 | ENST00000362496 | 106 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| STAG1 | Q8WVM7 | SNORA25.3-201 | ENST00000363205 | 127 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| STAG1 | Q8WVM7 | Y_RNA.330-201 | ENST00000365230 | 109 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| STAG1 | Q8WVM7 | MT-TN-201 | ENST00000387400 | 73 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| STAG1 | Q8WVM7 | Y_RNA.793-201 | ENST00000411222 | 111 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| STAG1 | Q8WVM7 | AF228730.3-201 | ENST00000436691 | 102 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| STAG1 | Q8WVM7 | FABP5P4-201 | ENST00000437203 | 171 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| STAG1 | Q8WVM7 | RPS23P4-201 | ENST00000487908 | 423 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| STAG1 | Q8WVM7 | SNORA18.4-201 | ENST00000516440 | 124 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| STAG1 | Q8WVM7 | MIR4431-201 | ENST00000579990 | 94 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| STAG1 | Q8WVM7 | DLEU2_5.2-201 | ENST00000610606 | 84 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| STAG1 | Q8WVM7 | SNORD114-24-201 | ENST00000365029 | 72 nt | BASIC | 1.43 | □□□□□ -2.18 | | |
| STAG1 | Q8WVM7 | SNORD77.3-201 | ENST00000391113 | 65 nt | BASIC | 1.43 | □□□□□ -2.18 | | |
| STAG1 | Q8WVM7 | RNU6-918P-201 | ENST00000391219 | 106 nt | BASIC | 1.43 | □□□□□ -2.18 | | |
| STAG1 | Q8WVM7 | SNORD111-201 | ENST00000408139 | 94 nt | BASIC | 1.43 | □□□□□ -2.18 | | |
| STAG1 | Q8WVM7 | MIR1276-201 | ENST00000408707 | 83 nt | BASIC | 1.43 | □□□□□ -2.18 | | |
| STAG1 | Q8WVM7 | AC002429.1-201 | ENST00000437672 | 148 nt | BASIC | 1.43 | □□□□□ -2.18 | | |
| STAG1 | Q8WVM7 | AL392103.1-201 | ENST00000447000 | 198 nt | BASIC | 1.43 | □□□□□ -2.18 | | |
| STAG1 | Q8WVM7 | Y_RNA.644-201 | ENST00000459006 | 113 nt | BASIC | 1.43 | □□□□□ -2.18 | | |
| STAG1 | Q8WVM7 | Y_RNA.674-201 | ENST00000516362 | 113 nt | BASIC | 1.43 | □□□□□ -2.18 | | |
| STAG1 | Q8WVM7 | RNU6-958P-201 | ENST00000516995 | 106 nt | BASIC | 1.43 | □□□□□ -2.18 | | |
| STAG1 | Q8WVM7 | AC008163.1-202 | ENST00000636004 | 2889 nt | BASIC | 1.43 | □□□□□ -2.18 | | |
| STAG1 | Q8WVM7 | CXADR-202 | ENST00000356275 | 270 nt | TSL 1 (best) BASIC | 1.42 | □□□□□ -2.18 | | |
| STAG1 | Q8WVM7 | RNU6-200P-201 | ENST00000364743 | 107 nt | BASIC | 1.42 | □□□□□ -2.18 | | |
| STAG1 | Q8WVM7 | Y_RNA.297-201 | ENST00000364950 | 91 nt | BASIC | 1.42 | □□□□□ -2.18 | | |
| STAG1 | Q8WVM7 | SNORA25.9-201 | ENST00000365087 | 128 nt | BASIC | 1.42 | □□□□□ -2.18 | | |
| STAG1 | Q8WVM7 | MIR570-201 | ENST00000384917 | 97 nt | BASIC | 1.42 | □□□□□ -2.18 | | |
| STAG1 | Q8WVM7 | MIR1185-1-201 | ENST00000408598 | 86 nt | BASIC | 1.42 | □□□□□ -2.18 | | |
| STAG1 | Q8WVM7 | AC067940.1-201 | ENST00000458411 | 300 nt | BASIC | 1.42 | □□□□□ -2.18 | | |
| STAG1 | Q8WVM7 | AC107027.2-201 | ENST00000512197 | 115 nt | BASIC | 1.42 | □□□□□ -2.18 | | |
| STAG1 | Q8WVM7 | RNU4ATAC11P-201 | ENST00000515939 | 126 nt | BASIC | 1.42 | □□□□□ -2.18 | | |
| STAG1 | Q8WVM7 | RNU6-561P-201 | ENST00000516222 | 102 nt | BASIC | 1.42 | □□□□□ -2.18 | | |
| STAG1 | Q8WVM7 | AC130289.1-201 | ENST00000577321 | 73 nt | BASIC | 1.42 | □□□□□ -2.18 | | |
| STAG1 | Q8WVM7 | PNRC2-204 | ENST00000579103 | 171 nt | TSL 2 BASIC | 1.42 | □□□□□ -2.18 | | |
| STAG1 | Q8WVM7 | Y_RNA.354-201 | ENST00000365448 | 111 nt | BASIC | 1.41 | □□□□□ -2.18 | | |
| STAG1 | Q8WVM7 | Y_RNA.357-201 | ENST00000365487 | 109 nt | BASIC | 1.41 | □□□□□ -2.18 | | |
| STAG1 | Q8WVM7 | Y_RNA.521-201 | ENST00000384560 | 114 nt | BASIC | 1.41 | □□□□□ -2.18 | | |
| STAG1 | Q8WVM7 | MIR499A-201 | ENST00000384903 | 122 nt | BASIC | 1.41 | □□□□□ -2.18 | | |