Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 RNU1-131P-201ENST00000458943 161 ntBASIC1.53□□□□□ -2.16
SNED1Q8TER0 AL163195.1-201ENST00000496941 348 ntBASIC1.53□□□□□ -2.16
SNED1Q8TER0 Y_RNA.712-201ENST00000517011 92 ntBASIC1.53□□□□□ -2.16
SNED1Q8TER0 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.53□□□□□ -2.16
SNED1Q8TER0 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.53□□□□□ -2.16
SNED1Q8TER0 AL358944.1-201ENST00000528537 144 ntBASIC1.53□□□□□ -2.16
SNED1Q8TER0 MTND5P34-201ENST00000568888 325 ntBASIC1.53□□□□□ -2.16
SNED1Q8TER0 MIR3129-201ENST00000581095 76 ntBASIC1.53□□□□□ -2.16
SNED1Q8TER0 AC103810.8-201ENST00000607347 118 ntBASIC1.53□□□□□ -2.16
SNED1Q8TER0 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.53□□□□□ -2.16
SNED1Q8TER0 ICE2P2-201ENST00000483823 2787 ntBASIC1.53□□□□□ -2.17
SNED1Q8TER0 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
SNED1Q8TER0 RNU6-862P-201ENST00000362804 105 ntBASIC1.52□□□□□ -2.17
SNED1Q8TER0 SNORA1-201ENST00000384107 130 ntBASIC1.52□□□□□ -2.17
SNED1Q8TER0 SNORD61-201ENST00000384252 73 ntBASIC1.52□□□□□ -2.17
SNED1Q8TER0 RNU6-476P-201ENST00000384726 107 ntBASIC1.52□□□□□ -2.17
SNED1Q8TER0 RNU7-94P-201ENST00000459576 63 ntBASIC1.52□□□□□ -2.17
SNED1Q8TER0 RNU6-693P-201ENST00000516134 107 ntBASIC1.52□□□□□ -2.17
SNED1Q8TER0 Y_RNA.666-201ENST00000516187 112 ntBASIC1.52□□□□□ -2.17
SNED1Q8TER0 FAM106DP-201ENST00000586416 501 ntBASIC1.52□□□□□ -2.17
SNED1Q8TER0 AL365205.2-201ENST00000594586 68 ntBASIC1.52□□□□□ -2.17
SNED1Q8TER0 AC108081.1-201ENST00000604358 221 ntBASIC1.52□□□□□ -2.17
SNED1Q8TER0 AL353149.1-201ENST00000610667 244 ntBASIC1.52□□□□□ -2.17
SNED1Q8TER0 MIR6129-201ENST00000616087 109 ntBASIC1.52□□□□□ -2.17
SNED1Q8TER0 AL591926.4-201ENST00000616895 298 ntBASIC1.52□□□□□ -2.17
SNED1Q8TER0 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
SNED1Q8TER0 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.51□□□□□ -2.17
SNED1Q8TER0 RNU6-1084P-201ENST00000362498 107 ntBASIC1.51□□□□□ -2.17
SNED1Q8TER0 SNORA1B-201ENST00000362535 133 ntBASIC1.51□□□□□ -2.17
SNED1Q8TER0 SNORA33-201ENST00000363664 130 ntBASIC1.51□□□□□ -2.17
SNED1Q8TER0 RNA5SP493-201ENST00000364115 91 ntBASIC1.51□□□□□ -2.17
SNED1Q8TER0 RNU6-647P-201ENST00000364243 107 ntBASIC1.51□□□□□ -2.17
SNED1Q8TER0 Y_RNA.242-201ENST00000364473 110 ntBASIC1.51□□□□□ -2.17
SNED1Q8TER0 RNU6-1144P-201ENST00000384247 104 ntBASIC1.51□□□□□ -2.17
SNED1Q8TER0 RNU6-429P-201ENST00000384582 108 ntBASIC1.51□□□□□ -2.17
SNED1Q8TER0 MIR597-201ENST00000384968 97 ntBASIC1.51□□□□□ -2.17
SNED1Q8TER0 MIR30A-201ENST00000385092 71 ntBASIC1.51□□□□□ -2.17
SNED1Q8TER0 SNORD72-201ENST00000390994 80 ntBASIC1.51□□□□□ -2.17
SNED1Q8TER0 Y_RNA.630-201ENST00000411370 108 ntBASIC1.51□□□□□ -2.17
SNED1Q8TER0 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.51□□□□□ -2.17
SNED1Q8TER0 RNU6-772P-201ENST00000516042 105 ntBASIC1.51□□□□□ -2.17
SNED1Q8TER0 RNU6-1270P-201ENST00000517128 108 ntBASIC1.51□□□□□ -2.17
SNED1Q8TER0 RNU2-60P-201ENST00000517290 128 ntBASIC1.51□□□□□ -2.17
SNED1Q8TER0 AC024995.1-201ENST00000523014 93 ntBASIC1.51□□□□□ -2.17
SNED1Q8TER0 AC007751.1-201ENST00000529260 376 ntBASIC1.51□□□□□ -2.17
SNED1Q8TER0 AC008507.4-201ENST00000585464 127 ntBASIC1.51□□□□□ -2.17
SNED1Q8TER0 AL022345.2-201ENST00000606307 135 ntBASIC1.51□□□□□ -2.17
SNED1Q8TER0 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.51□□□□□ -2.17
SNED1Q8TER0 MIR3914-2-201ENST00000637339 95 ntBASIC1.51□□□□□ -2.17
SNED1Q8TER0 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.51□□□□□ -2.17
SNED1Q8TER0 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.51□□□□□ -2.17
SNED1Q8TER0 Y_RNA.52-201ENST00000362760 96 ntBASIC1.5□□□□□ -2.17
SNED1Q8TER0 SNORD68-201ENST00000363214 84 ntBASIC1.5□□□□□ -2.17
SNED1Q8TER0 MIR515-2-201ENST00000384883 83 ntBASIC1.5□□□□□ -2.17
SNED1Q8TER0 MIR515-1-201ENST00000384884 83 ntBASIC1.5□□□□□ -2.17
SNED1Q8TER0 MIR802-201ENST00000390235 94 ntBASIC1.5□□□□□ -2.17
SNED1Q8TER0 SNORA48.1-201ENST00000390879 135 ntBASIC1.5□□□□□ -2.17
SNED1Q8TER0 SNORA40.5-201ENST00000391061 128 ntBASIC1.5□□□□□ -2.17
SNED1Q8TER0 MIR891A-201ENST00000401237 79 ntBASIC1.5□□□□□ -2.17
SNED1Q8TER0 FTH1P12-201ENST00000432137 551 ntBASIC1.5□□□□□ -2.17
SNED1Q8TER0 AF228730.3-201ENST00000436691 102 ntBASIC1.5□□□□□ -2.17
SNED1Q8TER0 MTATP6P21-201ENST00000440681 189 ntBASIC1.5□□□□□ -2.17
SNED1Q8TER0 PDCD5P2-201ENST00000507570 312 ntBASIC1.5□□□□□ -2.17
SNED1Q8TER0 AP002004.2-201ENST00000531656 154 ntBASIC1.5□□□□□ -2.17
SNED1Q8TER0 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.5□□□□□ -2.17
SNED1Q8TER0 U6.95-201ENST00000636931 70 ntBASIC1.5□□□□□ -2.17
SNED1Q8TER0 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
SNED1Q8TER0 RNU6-23P-201ENST00000363283 107 ntBASIC1.49□□□□□ -2.17
SNED1Q8TER0 RNU6-153P-201ENST00000364422 104 ntBASIC1.49□□□□□ -2.17
SNED1Q8TER0 Y_RNA.280-201ENST00000364765 112 ntBASIC1.49□□□□□ -2.17
SNED1Q8TER0 SNORA22-201ENST00000383907 134 ntBASIC1.49□□□□□ -2.17
SNED1Q8TER0 MIR522-201ENST00000385071 87 ntBASIC1.49□□□□□ -2.17
SNED1Q8TER0 MIR758-201ENST00000390227 88 ntBASIC1.49□□□□□ -2.17
SNED1Q8TER0 RNY4P18-201ENST00000391107 89 ntBASIC1.49□□□□□ -2.17
SNED1Q8TER0 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.49□□□□□ -2.17
SNED1Q8TER0 MIR548J-201ENST00000408833 112 ntBASIC1.49□□□□□ -2.17
SNED1Q8TER0 CST2P1-201ENST00000425770 87 ntBASIC1.49□□□□□ -2.17
SNED1Q8TER0 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.49□□□□□ -2.17
SNED1Q8TER0 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.49□□□□□ -2.17
SNED1Q8TER0 MTND5P32-201ENST00000560711 1802 ntBASIC1.49□□□□□ -2.17
SNED1Q8TER0 SNORA63.4-201ENST00000362763 126 ntBASIC1.49□□□□□ -2.17
SNED1Q8TER0 RNU6-888P-201ENST00000363010 101 ntBASIC1.49□□□□□ -2.17
SNED1Q8TER0 RNU6-1292P-201ENST00000383856 107 ntBASIC1.49□□□□□ -2.17
SNED1Q8TER0 SNORD24-201ENST00000383884 75 ntBASIC1.49□□□□□ -2.17
SNED1Q8TER0 MIR548A3-201ENST00000385297 97 ntBASIC1.49□□□□□ -2.17
SNED1Q8TER0 Y_RNA.617-201ENST00000410920 90 ntBASIC1.49□□□□□ -2.17
SNED1Q8TER0 RPS26P45-201ENST00000471748 340 ntBASIC1.49□□□□□ -2.17
SNED1Q8TER0 RN7SKP19-201ENST00000516016 252 ntBASIC1.49□□□□□ -2.17
SNED1Q8TER0 Y_RNA.709-201ENST00000516952 92 ntBASIC1.49□□□□□ -2.17
SNED1Q8TER0 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.49□□□□□ -2.17
SNED1Q8TER0 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
SNED1Q8TER0 MIR373-201ENST00000362273 69 ntBASIC1.48□□□□□ -2.17
SNED1Q8TER0 Y_RNA.265-201ENST00000364677 108 ntBASIC1.48□□□□□ -2.17
SNED1Q8TER0 SNORD58C-201ENST00000365223 64 ntBASIC1.48□□□□□ -2.17
SNED1Q8TER0 SNORD77.3-201ENST00000391113 65 ntBASIC1.48□□□□□ -2.17
SNED1Q8TER0 AC099677.2-201ENST00000436385 175 ntBASIC1.48□□□□□ -2.17
SNED1Q8TER0 RNU6-781P-201ENST00000516377 101 ntBASIC1.48□□□□□ -2.17
SNED1Q8TER0 MIR3169-201ENST00000578032 83 ntBASIC1.48□□□□□ -2.17
SNED1Q8TER0 AC087685.1-201ENST00000587507 141 ntBASIC1.48□□□□□ -2.17
SNED1Q8TER0 AC005786.1-201ENST00000588553 154 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 523.5 ms