| ASAP3 | Q8TDY4 | TXLNGY-201 | ENST00000253320 | 7299 nt | TSL 2 BASIC | 2.6 | □□□□□ -1.99 | | |
| ASAP3 | Q8TDY4 | OSTN-201 | ENST00000339051 | 402 nt | APPRIS P1 TSL 1 (best) BASIC | 2.59 | □□□□□ -1.99 | | |
| ASAP3 | Q8TDY4 | Y_RNA.93-201 | ENST00000363066 | 109 nt | BASIC | 2.59 | □□□□□ -1.99 | | |
| ASAP3 | Q8TDY4 | Y_RNA.171-201 | ENST00000363760 | 102 nt | BASIC | 2.59 | □□□□□ -1.99 | | |
| ASAP3 | Q8TDY4 | Y_RNA.299-201 | ENST00000364973 | 94 nt | BASIC | 2.59 | □□□□□ -1.99 | | |
| ASAP3 | Q8TDY4 | Y_RNA.466-201 | ENST00000384294 | 113 nt | BASIC | 2.59 | □□□□□ -1.99 | | |
| ASAP3 | Q8TDY4 | RPS12P2-201 | ENST00000439728 | 269 nt | BASIC | 2.59 | □□□□□ -1.99 | | |
| ASAP3 | Q8TDY4 | RPS29P29-201 | ENST00000456396 | 171 nt | BASIC | 2.59 | □□□□□ -1.99 | | |
| ASAP3 | Q8TDY4 | RNU6-893P-201 | ENST00000458841 | 100 nt | BASIC | 2.59 | □□□□□ -1.99 | | |
| ASAP3 | Q8TDY4 | RNU7-53P-201 | ENST00000516705 | 60 nt | BASIC | 2.59 | □□□□□ -1.99 | | |
| ASAP3 | Q8TDY4 | MIR548AR-201 | ENST00000582191 | 57 nt | BASIC | 2.59 | □□□□□ -1.99 | | |
| ASAP3 | Q8TDY4 | AGTPBP1-205 | ENST00000376083 | 4208 nt | APPRIS P1 TSL 1 (best) BASIC | 2.58 | □□□□□ -2 | | |
| ASAP3 | Q8TDY4 | RNU6-363P-201 | ENST00000362895 | 105 nt | BASIC | 2.58 | □□□□□ -2 | | |
| ASAP3 | Q8TDY4 | RNU6-1099P-201 | ENST00000363533 | 107 nt | BASIC | 2.58 | □□□□□ -2 | | |
| ASAP3 | Q8TDY4 | Y_RNA.558-201 | ENST00000384685 | 113 nt | BASIC | 2.58 | □□□□□ -2 | | |
| ASAP3 | Q8TDY4 | SNORD28B-201 | ENST00000390993 | 75 nt | BASIC | 2.58 | □□□□□ -2 | | |
| ASAP3 | Q8TDY4 | PGBD4P5-201 | ENST00000445958 | 426 nt | BASIC | 2.58 | □□□□□ -2 | | |
| ASAP3 | Q8TDY4 | SNORD123-201 | ENST00000459473 | 70 nt | BASIC | 2.58 | □□□□□ -2 | | |
| ASAP3 | Q8TDY4 | RNA5SP24-201 | ENST00000516478 | 95 nt | BASIC | 2.58 | □□□□□ -2 | | |
| ASAP3 | Q8TDY4 | RNU6-958P-201 | ENST00000516995 | 106 nt | BASIC | 2.58 | □□□□□ -2 | | |
| ASAP3 | Q8TDY4 | SACS-201 | ENST00000382292 | 15324 nt | APPRIS P1 TSL 5 BASIC | 2.57 | □□□□□ -2 | | |
| ASAP3 | Q8TDY4 | Y_RNA.430-201 | ENST00000384081 | 110 nt | BASIC | 2.57 | □□□□□ -2 | | |
| ASAP3 | Q8TDY4 | Y_RNA.507-201 | ENST00000384500 | 99 nt | BASIC | 2.57 | □□□□□ -2 | | |
| ASAP3 | Q8TDY4 | RNU4-69P-201 | ENST00000410677 | 143 nt | BASIC | 2.57 | □□□□□ -2 | | |
| ASAP3 | Q8TDY4 | RNU7-73P-201 | ENST00000458743 | 63 nt | BASIC | 2.57 | □□□□□ -2 | | |
| ASAP3 | Q8TDY4 | RNU7-67P-201 | ENST00000459003 | 62 nt | BASIC | 2.57 | □□□□□ -2 | | |
| ASAP3 | Q8TDY4 | RNU7-113P-201 | ENST00000459273 | 62 nt | BASIC | 2.57 | □□□□□ -2 | | |
| ASAP3 | Q8TDY4 | DEFB131E-201 | ENST00000532329 | 154 nt | BASIC | 2.57 | □□□□□ -2 | | |
| ASAP3 | Q8TDY4 | MIR4446-201 | ENST00000578505 | 67 nt | BASIC | 2.57 | □□□□□ -2 | | |
| ASAP3 | Q8TDY4 | MIR3152-201 | ENST00000579801 | 74 nt | BASIC | 2.57 | □□□□□ -2 | | |
| ASAP3 | Q8TDY4 | AC064859.1-201 | ENST00000624741 | 174 nt | BASIC | 2.57 | □□□□□ -2 | | |
| ASAP3 | Q8TDY4 | AC068631.1-220 | ENST00000630726 | 256 nt | TSL 5 BASIC | 2.57 | □□□□□ -2 | | |
| ASAP3 | Q8TDY4 | MIR424-201 | ENST00000362227 | 98 nt | BASIC | 2.56 | □□□□□ -2 | | |
| ASAP3 | Q8TDY4 | SNORA22.1-201 | ENST00000362701 | 134 nt | BASIC | 2.56 | □□□□□ -2 | | |
| ASAP3 | Q8TDY4 | RNU4-36P-201 | ENST00000364294 | 144 nt | BASIC | 2.56 | □□□□□ -2 | | |
| ASAP3 | Q8TDY4 | RNU1-51P-201 | ENST00000365345 | 176 nt | BASIC | 2.56 | □□□□□ -2 | | |
| ASAP3 | Q8TDY4 | RNA5SP100-201 | ENST00000410903 | 110 nt | BASIC | 2.56 | □□□□□ -2 | | |
| ASAP3 | Q8TDY4 | RNA5SP59-201 | ENST00000410922 | 110 nt | BASIC | 2.56 | □□□□□ -2 | | |
| ASAP3 | Q8TDY4 | AL162400.2-201 | ENST00000427547 | 157 nt | TSL 3 BASIC | 2.56 | □□□□□ -2 | | |
| ASAP3 | Q8TDY4 | 5S_rRNA.3-201 | ENST00000517021 | 110 nt | BASIC | 2.56 | □□□□□ -2 | | |
| ASAP3 | Q8TDY4 | MIR4694-201 | ENST00000578534 | 80 nt | BASIC | 2.56 | □□□□□ -2 | | |
| ASAP3 | Q8TDY4 | AL513534.2-201 | ENST00000603836 | 250 nt | BASIC | 2.56 | □□□□□ -2 | | |
| ASAP3 | Q8TDY4 | SNORD14A-201 | ENST00000606526 | 91 nt | BASIC | 2.56 | □□□□□ -2 | | |
| ASAP3 | Q8TDY4 | AL020996.3-201 | ENST00000606617 | 222 nt | BASIC | 2.56 | □□□□□ -2 | | |
| ASAP3 | Q8TDY4 | AL160408.5-201 | ENST00000607759 | 526 nt | TSL 4 BASIC | 2.56 | □□□□□ -2 | | |
| ASAP3 | Q8TDY4 | 5S_rRNA.19-201 | ENST00000612131 | 110 nt | BASIC | 2.56 | □□□□□ -2 | | |
| ASAP3 | Q8TDY4 | MALAT1.1-201 | ENST00000618249 | 95 nt | BASIC | 2.56 | □□□□□ -2 | | |
| ASAP3 | Q8TDY4 | 5S_rRNA.18-201 | ENST00000621941 | 110 nt | BASIC | 2.56 | □□□□□ -2 | | |
| ASAP3 | Q8TDY4 | MIR6717-201 | ENST00000622747 | 73 nt | BASIC | 2.56 | □□□□□ -2 | | |
| ASAP3 | Q8TDY4 | MIR203B-201 | ENST00000636080 | 86 nt | BASIC | 2.56 | □□□□□ -2 | | |
| ASAP3 | Q8TDY4 | XPO4-202 | ENST00000400602 | 9884 nt | APPRIS ALT1 TSL 5 BASIC | 2.55 | □□□□□ -2 | | |
| ASAP3 | Q8TDY4 | RNY3P2-201 | ENST00000362918 | 102 nt | BASIC | 2.55 | □□□□□ -2 | | |
| ASAP3 | Q8TDY4 | Y_RNA.107-201 | ENST00000363190 | 121 nt | BASIC | 2.55 | □□□□□ -2 | | |
| ASAP3 | Q8TDY4 | RNU4-67P-201 | ENST00000364569 | 141 nt | BASIC | 2.55 | □□□□□ -2 | | |
| ASAP3 | Q8TDY4 | Y_RNA.470-201 | ENST00000384307 | 117 nt | BASIC | 2.55 | □□□□□ -2 | | |
| ASAP3 | Q8TDY4 | RNY1P7-201 | ENST00000384743 | 110 nt | BASIC | 2.55 | □□□□□ -2 | | |
| ASAP3 | Q8TDY4 | RNU6-913P-201 | ENST00000390913 | 95 nt | BASIC | 2.55 | □□□□□ -2 | | |
| ASAP3 | Q8TDY4 | RNU6-1190P-201 | ENST00000410811 | 104 nt | BASIC | 2.55 | □□□□□ -2 | | |
| ASAP3 | Q8TDY4 | Z98742.3-201 | ENST00000418637 | 326 nt | BASIC | 2.55 | □□□□□ -2 | | |
| ASAP3 | Q8TDY4 | MIR1270-201 | ENST00000459320 | 83 nt | BASIC | 2.55 | □□□□□ -2 | | |
| ASAP3 | Q8TDY4 | SCARNA23-201 | ENST00000516060 | 130 nt | BASIC | 2.55 | □□□□□ -2 | | |
| ASAP3 | Q8TDY4 | RNU6-762P-201 | ENST00000517107 | 102 nt | BASIC | 2.55 | □□□□□ -2 | | |
| ASAP3 | Q8TDY4 | RNU6-844P-201 | ENST00000517175 | 102 nt | BASIC | 2.55 | □□□□□ -2 | | |
| ASAP3 | Q8TDY4 | HMSD-204 | ENST00000526932 | 162 nt | TSL 3 BASIC | 2.55 | □□□□□ -2 | | |
| ASAP3 | Q8TDY4 | DNAJC19P9-201 | ENST00000555084 | 351 nt | BASIC | 2.55 | □□□□□ -2 | | |
| ASAP3 | Q8TDY4 | MIR5007-201 | ENST00000583098 | 95 nt | BASIC | 2.55 | □□□□□ -2 | | |
| ASAP3 | Q8TDY4 | MIR4298-201 | ENST00000584380 | 73 nt | BASIC | 2.55 | □□□□□ -2 | | |
| ASAP3 | Q8TDY4 | AL442128.1-201 | ENST00000615151 | 90 nt | BASIC | 2.55 | □□□□□ -2 | | |
| ASAP3 | Q8TDY4 | AC243994.1-201 | ENST00000618627 | 109 nt | BASIC | 2.55 | □□□□□ -2 | | |
| ASAP3 | Q8TDY4 | U1.36-201 | ENST00000620684 | 176 nt | BASIC | 2.55 | □□□□□ -2 | | |
| ASAP3 | Q8TDY4 | SNORD3E-202 | ENST00000627253 | 216 nt | BASIC | 2.55 | □□□□□ -2 | | |
| ASAP3 | Q8TDY4 | ZNF658B-202 | ENST00000615961 | 3375 nt | BASIC | 2.54 | □□□□□ -2 | | |
| ASAP3 | Q8TDY4 | Y_RNA.220-201 | ENST00000364244 | 109 nt | BASIC | 2.54 | □□□□□ -2 | | |
| ASAP3 | Q8TDY4 | Y_RNA.360-201 | ENST00000365512 | 102 nt | BASIC | 2.54 | □□□□□ -2 | | |
| ASAP3 | Q8TDY4 | MIR577-201 | ENST00000385196 | 96 nt | BASIC | 2.54 | □□□□□ -2 | | |
| ASAP3 | Q8TDY4 | RNU4ATAC16P-201 | ENST00000408512 | 126 nt | BASIC | 2.54 | □□□□□ -2 | | |
| ASAP3 | Q8TDY4 | Y_RNA.601-201 | ENST00000410500 | 113 nt | BASIC | 2.54 | □□□□□ -2 | | |
| ASAP3 | Q8TDY4 | RNA5SP261-201 | ENST00000410536 | 106 nt | BASIC | 2.54 | □□□□□ -2 | | |
| ASAP3 | Q8TDY4 | RNA5SP450-201 | ENST00000411206 | 102 nt | BASIC | 2.54 | □□□□□ -2 | | |
| ASAP3 | Q8TDY4 | RNA5SP270-201 | ENST00000411361 | 118 nt | BASIC | 2.54 | □□□□□ -2 | | |
| ASAP3 | Q8TDY4 | AL353813.1-201 | ENST00000440700 | 253 nt | BASIC | 2.54 | □□□□□ -2 | | |
| ASAP3 | Q8TDY4 | RNA5SP57-201 | ENST00000459463 | 123 nt | BASIC | 2.54 | □□□□□ -2 | | |
| ASAP3 | Q8TDY4 | MIR3945-201 | ENST00000581853 | 98 nt | BASIC | 2.54 | □□□□□ -2 | | |
| ASAP3 | Q8TDY4 | CEP57L1-216 | ENST00000521522 | 2259 nt | TSL 5 BASIC | 2.54 | □□□□□ -2 | | |
| ASAP3 | Q8TDY4 | STX7-202 | ENST00000367941 | 15791 nt | APPRIS P1 TSL 1 (best) BASIC | 2.53 | □□□□□ -2 | | |
| ASAP3 | Q8TDY4 | AP006437.1-201 | ENST00000641440 | 3685 nt | BASIC | 2.53 | □□□□□ -2 | | |
| ASAP3 | Q8TDY4 | CAPS2-203 | ENST00000393284 | 3430 nt | APPRIS P1 TSL 1 (best) BASIC | 2.53 | □□□□□ -2 | | |
| ASAP3 | Q8TDY4 | Y_RNA.342-201 | ENST00000365352 | 113 nt | BASIC | 2.53 | □□□□□ -2 | | |
| ASAP3 | Q8TDY4 | RNU6-409P-201 | ENST00000384114 | 104 nt | BASIC | 2.53 | □□□□□ -2 | | |
| ASAP3 | Q8TDY4 | Y_RNA.537-201 | ENST00000384626 | 109 nt | BASIC | 2.53 | □□□□□ -2 | | |
| ASAP3 | Q8TDY4 | RNU6-733P-201 | ENST00000410759 | 104 nt | BASIC | 2.53 | □□□□□ -2 | | |
| ASAP3 | Q8TDY4 | RNY4P29-201 | ENST00000410801 | 97 nt | BASIC | 2.53 | □□□□□ -2 | | |
| ASAP3 | Q8TDY4 | RPS3AP1-201 | ENST00000413190 | 320 nt | BASIC | 2.53 | □□□□□ -2 | | |
| ASAP3 | Q8TDY4 | RNU1-41P-201 | ENST00000516161 | 162 nt | BASIC | 2.53 | □□□□□ -2 | | |
| ASAP3 | Q8TDY4 | RNU1-48P-201 | ENST00000516400 | 162 nt | BASIC | 2.53 | □□□□□ -2 | | |
| ASAP3 | Q8TDY4 | SNORA31.25-201 | ENST00000517242 | 134 nt | BASIC | 2.53 | □□□□□ -2 | | |
| ASAP3 | Q8TDY4 | MIR548AE2-201 | ENST00000583456 | 67 nt | BASIC | 2.53 | □□□□□ -2 | | |
| ASAP3 | Q8TDY4 | MIR4791-201 | ENST00000607666 | 84 nt | BASIC | 2.53 | □□□□□ -2 | | |
| ASAP3 | Q8TDY4 | RGPD1-204 | ENST00000559485 | 5247 nt | APPRIS P2 TSL 1 (best) BASIC | 2.53 | □□□□□ -2 | | |
| ASAP3 | Q8TDY4 | EYS-211 | ENST00000503581 | 10589 nt | APPRIS P3 TSL 5 BASIC | 2.52 | □□□□□ -2.01 | | |