Protein–RNA interactions for Protein: Q8NCR9

CLRN3, Clarin-3, humanhuman

Predictions only

Length 226 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3Q8NCR9 RNU6-177P-201ENST00000411257 104 ntBASIC1.65□□□□□ -2.15
CLRN3Q8NCR9 RNU6-1054P-201ENST00000411293 104 ntBASIC1.65□□□□□ -2.15
CLRN3Q8NCR9 AL445685.2-201ENST00000422551 342 ntBASIC1.65□□□□□ -2.15
CLRN3Q8NCR9 Y_RNA.651-201ENST00000459380 103 ntBASIC1.65□□□□□ -2.15
CLRN3Q8NCR9 CYP3A52P-201ENST00000563326 91 ntBASIC1.65□□□□□ -2.15
CLRN3Q8NCR9 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.65□□□□□ -2.15
CLRN3Q8NCR9 MIR3910-1-201ENST00000580936 111 ntBASIC1.65□□□□□ -2.15
CLRN3Q8NCR9 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.65□□□□□ -2.15
CLRN3Q8NCR9 MIR8065-201ENST00000620577 100 ntBASIC1.65□□□□□ -2.15
CLRN3Q8NCR9 AC021613.1-201ENST00000623880 111 ntBASIC1.65□□□□□ -2.15
CLRN3Q8NCR9 AC132825.6-201ENST00000638861 357 ntBASIC1.65□□□□□ -2.15
CLRN3Q8NCR9 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.64□□□□□ -2.15
CLRN3Q8NCR9 SNORA67.4-201ENST00000384688 142 ntBASIC1.64□□□□□ -2.15
CLRN3Q8NCR9 KRTAP19-11P-201ENST00000439851 104 ntBASIC1.64□□□□□ -2.15
CLRN3Q8NCR9 RNA5SP320-201ENST00000516263 124 ntBASIC1.64□□□□□ -2.15
CLRN3Q8NCR9 RNU11-2P-201ENST00000516898 142 ntBASIC1.64□□□□□ -2.15
CLRN3Q8NCR9 MIR548AO-201ENST00000579992 96 ntBASIC1.64□□□□□ -2.15
CLRN3Q8NCR9 MIR3162-201ENST00000581818 82 ntBASIC1.64□□□□□ -2.15
CLRN3Q8NCR9 MIR6817-201ENST00000615588 66 ntBASIC1.64□□□□□ -2.15
CLRN3Q8NCR9 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
CLRN3Q8NCR9 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.63□□□□□ -2.15
CLRN3Q8NCR9 RNA5SP264-201ENST00000363115 107 ntBASIC1.63□□□□□ -2.15
CLRN3Q8NCR9 Y_RNA.114-201ENST00000363265 113 ntBASIC1.63□□□□□ -2.15
CLRN3Q8NCR9 Y_RNA.354-201ENST00000365448 111 ntBASIC1.63□□□□□ -2.15
CLRN3Q8NCR9 AC245047.7-201ENST00000440265 293 ntBASIC1.63□□□□□ -2.15
CLRN3Q8NCR9 SNORA31.4-201ENST00000516049 129 ntBASIC1.63□□□□□ -2.15
CLRN3Q8NCR9 AC133485.4-201ENST00000561835 220 ntBASIC1.63□□□□□ -2.15
CLRN3Q8NCR9 AC138907.4-201ENST00000570107 226 ntBASIC1.63□□□□□ -2.15
CLRN3Q8NCR9 AC103810.6-201ENST00000606708 136 ntBASIC1.63□□□□□ -2.15
CLRN3Q8NCR9 Z97988.1-201ENST00000637697 135 ntBASIC1.63□□□□□ -2.15
CLRN3Q8NCR9 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.63□□□□□ -2.15
CLRN3Q8NCR9 MIR103A2-201ENST00000362154 78 ntBASIC1.62□□□□□ -2.15
CLRN3Q8NCR9 RNU6-81P-201ENST00000365608 104 ntBASIC1.62□□□□□ -2.15
CLRN3Q8NCR9 Y_RNA.430-201ENST00000384081 110 ntBASIC1.62□□□□□ -2.15
CLRN3Q8NCR9 AC019129.1-201ENST00000403786 261 ntBASIC1.62□□□□□ -2.15
CLRN3Q8NCR9 RPS3AP1-201ENST00000413190 320 ntBASIC1.62□□□□□ -2.15
CLRN3Q8NCR9 RNU6-240P-201ENST00000516098 97 ntBASIC1.62□□□□□ -2.15
CLRN3Q8NCR9 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.62□□□□□ -2.15
CLRN3Q8NCR9 MIR3683-201ENST00000580847 82 ntBASIC1.62□□□□□ -2.15
CLRN3Q8NCR9 MIR8055-201ENST00000610739 97 ntBASIC1.62□□□□□ -2.15
CLRN3Q8NCR9 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
CLRN3Q8NCR9 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
CLRN3Q8NCR9 SNORA25.3-201ENST00000363205 127 ntBASIC1.61□□□□□ -2.15
CLRN3Q8NCR9 RNU6-396P-201ENST00000365369 105 ntBASIC1.61□□□□□ -2.15
CLRN3Q8NCR9 AL158147.1-201ENST00000443970 75 ntBASIC1.61□□□□□ -2.15
CLRN3Q8NCR9 RNU6-1211P-201ENST00000459179 105 ntBASIC1.61□□□□□ -2.15
CLRN3Q8NCR9 MIR2115-201ENST00000516657 100 ntBASIC1.61□□□□□ -2.15
CLRN3Q8NCR9 AP003716.2-201ENST00000528260 108 ntBASIC1.61□□□□□ -2.15
CLRN3Q8NCR9 AL033523.1-201ENST00000605153 153 ntBASIC1.61□□□□□ -2.15
CLRN3Q8NCR9 MIR6717-201ENST00000622747 73 ntBASIC1.61□□□□□ -2.15
CLRN3Q8NCR9 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
CLRN3Q8NCR9 RNU6-508P-201ENST00000363231 103 ntBASIC1.6□□□□□ -2.15
CLRN3Q8NCR9 RNU4-16P-201ENST00000364737 141 ntBASIC1.6□□□□□ -2.15
CLRN3Q8NCR9 Y_RNA.280-201ENST00000364765 112 ntBASIC1.6□□□□□ -2.15
CLRN3Q8NCR9 SNORA26.6-201ENST00000391256 115 ntBASIC1.6□□□□□ -2.15
CLRN3Q8NCR9 snoU13.25-201ENST00000458945 104 ntBASIC1.6□□□□□ -2.15
CLRN3Q8NCR9 SNORA31.2-201ENST00000516019 134 ntBASIC1.6□□□□□ -2.15
CLRN3Q8NCR9 RNA5SP200-201ENST00000516360 103 ntBASIC1.6□□□□□ -2.15
CLRN3Q8NCR9 RNA5SP148-201ENST00000516527 94 ntBASIC1.6□□□□□ -2.15
CLRN3Q8NCR9 RNU6-971P-201ENST00000516920 106 ntBASIC1.6□□□□□ -2.15
CLRN3Q8NCR9 AC021443.1-201ENST00000604478 211 ntBASIC1.6□□□□□ -2.15
CLRN3Q8NCR9 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
CLRN3Q8NCR9 Y_RNA.510-201ENST00000384511 114 ntBASIC1.59□□□□□ -2.15
CLRN3Q8NCR9 SNORD38B-201ENST00000384690 67 ntBASIC1.59□□□□□ -2.15
CLRN3Q8NCR9 RNU6-997P-201ENST00000384725 107 ntBASIC1.59□□□□□ -2.15
CLRN3Q8NCR9 AL022718.1-201ENST00000412004 84 ntBASIC1.59□□□□□ -2.15
CLRN3Q8NCR9 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.59□□□□□ -2.15
CLRN3Q8NCR9 RNU7-45P-201ENST00000459460 63 ntBASIC1.59□□□□□ -2.15
CLRN3Q8NCR9 AC048334.1-201ENST00000477975 159 ntBASIC1.59□□□□□ -2.15
CLRN3Q8NCR9 AL137067.1-201ENST00000615933 120 ntBASIC1.59□□□□□ -2.15
CLRN3Q8NCR9 SNORD38B-202ENST00000625943 69 ntBASIC1.59□□□□□ -2.15
CLRN3Q8NCR9 Y_RNA.294-201ENST00000364916 102 ntBASIC1.58□□□□□ -2.16
CLRN3Q8NCR9 RNU6-80P-201ENST00000384195 107 ntBASIC1.58□□□□□ -2.16
CLRN3Q8NCR9 RNU6-1190P-201ENST00000410811 104 ntBASIC1.58□□□□□ -2.16
CLRN3Q8NCR9 HMGN1P33-201ENST00000432945 451 ntBASIC1.58□□□□□ -2.16
CLRN3Q8NCR9 RNU6-406P-201ENST00000516470 107 ntBASIC1.58□□□□□ -2.16
CLRN3Q8NCR9 MIR4305-201ENST00000583252 102 ntBASIC1.58□□□□□ -2.16
CLRN3Q8NCR9 PRELID3BP2-201ENST00000605362 201 ntBASIC1.58□□□□□ -2.16
CLRN3Q8NCR9 MIR6132-201ENST00000622083 109 ntBASIC1.58□□□□□ -2.16
CLRN3Q8NCR9 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC1.57□□□□□ -2.16
CLRN3Q8NCR9 SNORA22.1-201ENST00000362701 134 ntBASIC1.57□□□□□ -2.16
CLRN3Q8NCR9 Y_RNA.366-201ENST00000365540 102 ntBASIC1.57□□□□□ -2.16
CLRN3Q8NCR9 RNU6-959P-201ENST00000384671 107 ntBASIC1.57□□□□□ -2.16
CLRN3Q8NCR9 RNA5SP144-201ENST00000410846 116 ntBASIC1.57□□□□□ -2.16
CLRN3Q8NCR9 AC108938.1-201ENST00000451204 136 ntBASIC1.57□□□□□ -2.16
CLRN3Q8NCR9 RN7SKP179-201ENST00000516126 217 ntBASIC1.57□□□□□ -2.16
CLRN3Q8NCR9 RNU6-970P-201ENST00000516312 107 ntBASIC1.57□□□□□ -2.16
CLRN3Q8NCR9 AP000942.3-201ENST00000603702 160 ntBASIC1.57□□□□□ -2.16
CLRN3Q8NCR9 AP000753.3-201ENST00000604083 169 ntBASIC1.57□□□□□ -2.16
CLRN3Q8NCR9 AC108081.1-201ENST00000604358 221 ntBASIC1.57□□□□□ -2.16
CLRN3Q8NCR9 AC046143.2-201ENST00000609789 160 ntBASIC1.57□□□□□ -2.16
CLRN3Q8NCR9 MIR6841-201ENST00000637129 72 ntBASIC1.57□□□□□ -2.16
CLRN3Q8NCR9 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.57□□□□□ -2.16
CLRN3Q8NCR9 AL161722.3-201ENST00000605789 2983 ntBASIC1.56□□□□□ -2.16
CLRN3Q8NCR9 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
CLRN3Q8NCR9 RNA5SP363-201ENST00000365072 115 ntBASIC1.56□□□□□ -2.16
CLRN3Q8NCR9 MIR221-201ENST00000385135 110 ntBASIC1.56□□□□□ -2.16
CLRN3Q8NCR9 MT-TN-201ENST00000387400 73 ntBASIC1.56□□□□□ -2.16
CLRN3Q8NCR9 MIR1185-1-201ENST00000408598 86 ntBASIC1.56□□□□□ -2.16
CLRN3Q8NCR9 MIR1302-7-201ENST00000408841 72 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 167.8 ms