Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 MIR17-201ENST00000385012 84 ntBASIC1.93□□□□□ -2.1
SLC44A3Q8N4M1 MIR9-3-201ENST00000385084 90 ntBASIC1.93□□□□□ -2.1
SLC44A3Q8N4M1 AL034345.1-201ENST00000407768 123 ntBASIC1.93□□□□□ -2.1
SLC44A3Q8N4M1 AC099513.1-201ENST00000490423 301 ntBASIC1.93□□□□□ -2.1
SLC44A3Q8N4M1 COX6CP6-201ENST00000490840 228 ntBASIC1.93□□□□□ -2.1
SLC44A3Q8N4M1 TRMT112P2-201ENST00000512910 132 ntBASIC1.93□□□□□ -2.1
SLC44A3Q8N4M1 SNORA31.4-201ENST00000516049 129 ntBASIC1.93□□□□□ -2.1
SLC44A3Q8N4M1 RNA5SP168-201ENST00000516642 112 ntBASIC1.93□□□□□ -2.1
SLC44A3Q8N4M1 RNU6-250P-201ENST00000516958 103 ntBASIC1.93□□□□□ -2.1
SLC44A3Q8N4M1 MIR8070-201ENST00000616510 88 ntBASIC1.93□□□□□ -2.1
SLC44A3Q8N4M1 Y_RNA.116-201ENST00000363292 103 ntBASIC1.92□□□□□ -2.1
SLC44A3Q8N4M1 RNA5SP138-201ENST00000365098 114 ntBASIC1.92□□□□□ -2.1
SLC44A3Q8N4M1 SNORA22-201ENST00000383907 134 ntBASIC1.92□□□□□ -2.1
SLC44A3Q8N4M1 RNU6-950P-201ENST00000384651 107 ntBASIC1.92□□□□□ -2.1
SLC44A3Q8N4M1 MIR520A-201ENST00000384862 85 ntBASIC1.92□□□□□ -2.1
SLC44A3Q8N4M1 MIR570-201ENST00000384917 97 ntBASIC1.92□□□□□ -2.1
SLC44A3Q8N4M1 MIR489-201ENST00000384923 84 ntBASIC1.92□□□□□ -2.1
SLC44A3Q8N4M1 MIR548A1-201ENST00000385041 97 ntBASIC1.92□□□□□ -2.1
SLC44A3Q8N4M1 RNU2-40P-201ENST00000410833 196 ntBASIC1.92□□□□□ -2.1
SLC44A3Q8N4M1 MIR3613-201ENST00000579844 87 ntBASIC1.92□□□□□ -2.1
SLC44A3Q8N4M1 AL359821.1-201ENST00000605519 182 ntBASIC1.92□□□□□ -2.1
SLC44A3Q8N4M1 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.92□□□□□ -2.1
SLC44A3Q8N4M1 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
SLC44A3Q8N4M1 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
SLC44A3Q8N4M1 Y_RNA.281-201ENST00000364774 94 ntBASIC1.91□□□□□ -2.1
SLC44A3Q8N4M1 RNU6-147P-201ENST00000383983 107 ntBASIC1.91□□□□□ -2.1
SLC44A3Q8N4M1 SNORD38C-201ENST00000384381 69 ntBASIC1.91□□□□□ -2.1
SLC44A3Q8N4M1 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
SLC44A3Q8N4M1 RNA5SP450-201ENST00000411206 102 ntBASIC1.91□□□□□ -2.1
SLC44A3Q8N4M1 AC015922.2-201ENST00000435593 184 ntBASIC1.91□□□□□ -2.1
SLC44A3Q8N4M1 SNORA31.25-201ENST00000517242 134 ntBASIC1.91□□□□□ -2.1
SLC44A3Q8N4M1 AC021506.2-201ENST00000612354 169 ntBASIC1.91□□□□□ -2.1
SLC44A3Q8N4M1 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.91□□□□□ -2.1
SLC44A3Q8N4M1 AC091932.4-201ENST00000623386 200 ntBASIC1.91□□□□□ -2.1
SLC44A3Q8N4M1 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.91□□□□□ -2.1
SLC44A3Q8N4M1 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.91□□□□□ -2.1
SLC44A3Q8N4M1 AL359851.1-201ENST00000569460 4997 ntBASIC1.91□□□□□ -2.1
SLC44A3Q8N4M1 RNY1P6-201ENST00000384193 109 ntBASIC1.9□□□□□ -2.11
SLC44A3Q8N4M1 Y_RNA.494-201ENST00000384432 111 ntBASIC1.9□□□□□ -2.11
SLC44A3Q8N4M1 SNORA67.5-201ENST00000391036 107 ntBASIC1.9□□□□□ -2.11
SLC44A3Q8N4M1 RNA5SP100-201ENST00000410903 110 ntBASIC1.9□□□□□ -2.11
SLC44A3Q8N4M1 RNA5SP59-201ENST00000410922 110 ntBASIC1.9□□□□□ -2.11
SLC44A3Q8N4M1 snoU13.18-201ENST00000459483 104 ntBASIC1.9□□□□□ -2.11
SLC44A3Q8N4M1 RNY4P20-201ENST00000516678 93 ntBASIC1.9□□□□□ -2.11
SLC44A3Q8N4M1 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.9□□□□□ -2.11
SLC44A3Q8N4M1 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.9□□□□□ -2.11
SLC44A3Q8N4M1 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.9□□□□□ -2.11
SLC44A3Q8N4M1 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.9□□□□□ -2.11
SLC44A3Q8N4M1 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.9□□□□□ -2.11
SLC44A3Q8N4M1 AC245060.5-201ENST00000610778 3293 ntBASIC1.89□□□□□ -2.11
SLC44A3Q8N4M1 SNORD115-34-201ENST00000362441 82 ntBASIC1.89□□□□□ -2.11
SLC44A3Q8N4M1 RNU6-1298P-201ENST00000362456 101 ntBASIC1.89□□□□□ -2.11
SLC44A3Q8N4M1 SNORD115-12-201ENST00000362583 82 ntBASIC1.89□□□□□ -2.11
SLC44A3Q8N4M1 SNORD115-29-201ENST00000362834 82 ntBASIC1.89□□□□□ -2.11
SLC44A3Q8N4M1 SNORD115-9-201ENST00000362912 82 ntBASIC1.89□□□□□ -2.11
SLC44A3Q8N4M1 SNORD115-21-201ENST00000362963 81 ntBASIC1.89□□□□□ -2.11
SLC44A3Q8N4M1 SNORD115-14-201ENST00000363090 81 ntBASIC1.89□□□□□ -2.11
SLC44A3Q8N4M1 SNORD115-13-201ENST00000363358 82 ntBASIC1.89□□□□□ -2.11
SLC44A3Q8N4M1 SNORD115-41-201ENST00000363608 82 ntBASIC1.89□□□□□ -2.11
SLC44A3Q8N4M1 SNORD115-11-201ENST00000363616 82 ntBASIC1.89□□□□□ -2.11
SLC44A3Q8N4M1 SNORD115-5-201ENST00000363633 82 ntBASIC1.89□□□□□ -2.11
SLC44A3Q8N4M1 SNORD115-39-201ENST00000363694 82 ntBASIC1.89□□□□□ -2.11
SLC44A3Q8N4M1 SNORD115-4-201ENST00000363810 82 ntBASIC1.89□□□□□ -2.11
SLC44A3Q8N4M1 SNORD115-16-201ENST00000363887 82 ntBASIC1.89□□□□□ -2.11
SLC44A3Q8N4M1 SNORD115-6-201ENST00000363942 82 ntBASIC1.89□□□□□ -2.11
SLC44A3Q8N4M1 SNORD115-42-201ENST00000364273 82 ntBASIC1.89□□□□□ -2.11
SLC44A3Q8N4M1 SNORA16B-201ENST00000364674 135 ntBASIC1.89□□□□□ -2.11
SLC44A3Q8N4M1 SNORD115-15-201ENST00000364809 81 ntBASIC1.89□□□□□ -2.11
SLC44A3Q8N4M1 RNA5SP160-201ENST00000364866 120 ntBASIC1.89□□□□□ -2.11
SLC44A3Q8N4M1 SNORD115-1-201ENST00000364961 82 ntBASIC1.89□□□□□ -2.11
SLC44A3Q8N4M1 SNORD115-26-201ENST00000365067 82 ntBASIC1.89□□□□□ -2.11
SLC44A3Q8N4M1 SNORD115-10-201ENST00000365073 81 ntBASIC1.89□□□□□ -2.11
SLC44A3Q8N4M1 RNU6-690P-201ENST00000365242 106 ntBASIC1.89□□□□□ -2.11
SLC44A3Q8N4M1 SNORD115-43-201ENST00000365503 82 ntBASIC1.89□□□□□ -2.11
SLC44A3Q8N4M1 SNORD115-36-201ENST00000365629 82 ntBASIC1.89□□□□□ -2.11
SLC44A3Q8N4M1 MT-TI-201ENST00000387365 69 ntBASIC1.89□□□□□ -2.11
SLC44A3Q8N4M1 RPS29P11-201ENST00000496507 171 ntBASIC1.89□□□□□ -2.11
SLC44A3Q8N4M1 MIR4529-201ENST00000578110 78 ntBASIC1.89□□□□□ -2.11
SLC44A3Q8N4M1 SNORD115-40-201ENST00000606510 82 ntBASIC1.89□□□□□ -2.11
SLC44A3Q8N4M1 uc_338.20-201ENST00000621563 178 ntBASIC1.89□□□□□ -2.11
SLC44A3Q8N4M1 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
SLC44A3Q8N4M1 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
SLC44A3Q8N4M1 Y_RNA.198-201ENST00000364013 98 ntBASIC1.88□□□□□ -2.11
SLC44A3Q8N4M1 RNU1-133P-201ENST00000364867 167 ntBASIC1.88□□□□□ -2.11
SLC44A3Q8N4M1 Y_RNA.351-201ENST00000365436 96 ntBASIC1.88□□□□□ -2.11
SLC44A3Q8N4M1 RNA5SP233-201ENST00000459153 113 ntBASIC1.88□□□□□ -2.11
SLC44A3Q8N4M1 RNU6-998P-201ENST00000515894 101 ntBASIC1.88□□□□□ -2.11
SLC44A3Q8N4M1 SNORA18.7-201ENST00000516910 131 ntBASIC1.88□□□□□ -2.11
SLC44A3Q8N4M1 AC007012.1-201ENST00000567192 175 ntBASIC1.88□□□□□ -2.11
SLC44A3Q8N4M1 MIR4303-201ENST00000581299 66 ntBASIC1.88□□□□□ -2.11
SLC44A3Q8N4M1 AL513423.1-201ENST00000621695 132 ntBASIC1.88□□□□□ -2.11
SLC44A3Q8N4M1 AL035470.1-201ENST00000622571 220 ntBASIC1.88□□□□□ -2.11
SLC44A3Q8N4M1 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
SLC44A3Q8N4M1 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.87□□□□□ -2.11
SLC44A3Q8N4M1 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.87□□□□□ -2.11
SLC44A3Q8N4M1 Y_RNA.298-201ENST00000364960 107 ntBASIC1.87□□□□□ -2.11
SLC44A3Q8N4M1 SNORA27-201ENST00000384323 126 ntBASIC1.87□□□□□ -2.11
SLC44A3Q8N4M1 Y_RNA.549-201ENST00000384657 102 ntBASIC1.87□□□□□ -2.11
SLC44A3Q8N4M1 MIR526A1-201ENST00000384897 85 ntBASIC1.87□□□□□ -2.11
SLC44A3Q8N4M1 MIR660-201ENST00000385235 97 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 170.9 ms